RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 RNF17Q9BXT8 1623 aaKnown RBP16.97■□□□□ 0.31
TUBA1C-208ENST00000552125 MYO3AQ8NEV4 1616 aa16.96■□□□□ 0.31
TUBA1C-208ENST00000552125 GGT6Q6P531 493 aa16.96■□□□□ 0.31
TUBA1C-208ENST00000552125 PZPP20742 1482 aa16.95■□□□□ 0.3
TUBA1C-208ENST00000552125 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
TUBA1C-208ENST00000552125 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
TUBA1C-208ENST00000552125 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
TUBA1C-208ENST00000552125 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
TUBA1C-208ENST00000552125 KIF3BO15066 747 aa16.92■□□□□ 0.3
TUBA1C-208ENST00000552125 APLP2Q06481 763 aa16.92■□□□□ 0.3
TUBA1C-208ENST00000552125 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
TUBA1C-208ENST00000552125 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
TUBA1C-208ENST00000552125 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
TUBA1C-208ENST00000552125 A2ML1A8K2U0 1454 aa16.91■□□□□ 0.3
TUBA1C-208ENST00000552125 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
TUBA1C-208ENST00000552125 FGD6Q6ZV73 1430 aa16.89■□□□□ 0.29
TUBA1C-208ENST00000552125 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
TUBA1C-208ENST00000552125 CERKQ8TCT0 537 aa16.89■□□□□ 0.29
TUBA1C-208ENST00000552125 PKD2Q13563 968 aa16.88■□□□□ 0.29
TUBA1C-208ENST00000552125 MROH1Q8NDA8 1641 aa16.88■□□□□ 0.29
TUBA1C-208ENST00000552125 ABCC5O15440 1437 aa16.87■□□□□ 0.29
TUBA1C-208ENST00000552125 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
TUBA1C-208ENST00000552125 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
TUBA1C-208ENST00000552125 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
TUBA1C-208ENST00000552125 ABCC3O15438 1527 aa16.86■□□□□ 0.29
TUBA1C-208ENST00000552125 TNRQ92752 1358 aa16.86■□□□□ 0.29
TUBA1C-208ENST00000552125 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
TUBA1C-208ENST00000552125 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
TUBA1C-208ENST00000552125 DAPK1P53355 1430 aa16.85■□□□□ 0.29
TUBA1C-208ENST00000552125 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
TUBA1C-208ENST00000552125 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
TUBA1C-208ENST00000552125 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
TUBA1C-208ENST00000552125 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
TUBA1C-208ENST00000552125 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
TUBA1C-208ENST00000552125 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
TUBA1C-208ENST00000552125 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
TUBA1C-208ENST00000552125 FBXO31Q5XUX0 539 aaPredicted RBP16.78■□□□□ 0.28
TUBA1C-208ENST00000552125 LMTK2Q8IWU2 1503 aa16.78■□□□□ 0.28
TUBA1C-208ENST00000552125 ERVK-7P63135 1459 aa16.78■□□□□ 0.28
TUBA1C-208ENST00000552125 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.28
TUBA1C-208ENST00000552125 MED14O60244 1454 aa16.77■□□□□ 0.28
TUBA1C-208ENST00000552125 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
TUBA1C-208ENST00000552125 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.27
TUBA1C-208ENST00000552125 CEP152O94986 1710 aa16.76■□□□□ 0.27
TUBA1C-208ENST00000552125 THEMISQ8N1K5 641 aaPredicted RBP16.75■□□□□ 0.27
TUBA1C-208ENST00000552125 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
TUBA1C-208ENST00000552125 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
TUBA1C-208ENST00000552125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.274e-8■■■□□ 15.9
TUBA1C-208ENST00000552125 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
TUBA1C-208ENST00000552125 KANK1Q14678 1352 aa16.71■□□□□ 0.27
TUBA1C-208ENST00000552125 ANKLE2Q86XL3 938 aa16.7■□□□□ 0.26
TUBA1C-208ENST00000552125 UBR1Q8IWV7 1749 aa16.7■□□□□ 0.26
TUBA1C-208ENST00000552125 CPS1P31327 1500 aa16.7■□□□□ 0.26
TUBA1C-208ENST00000552125 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
TUBA1C-208ENST00000552125 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
TUBA1C-208ENST00000552125 SLIT1O75093 1534 aa16.68■□□□□ 0.26
TUBA1C-208ENST00000552125 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
TUBA1C-208ENST00000552125 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
TUBA1C-208ENST00000552125 EFCAB6Q5THR3 1501 aa16.67■□□□□ 0.26
TUBA1C-208ENST00000552125 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
TUBA1C-208ENST00000552125 ANKRD50Q9ULJ7 1429 aa16.66■□□□□ 0.26
TUBA1C-208ENST00000552125 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
TUBA1C-208ENST00000552125 NOS1P29475 1434 aa16.65■□□□□ 0.26
TUBA1C-208ENST00000552125 UNC13BO14795 1591 aa16.63■□□□□ 0.25
TUBA1C-208ENST00000552125 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
TUBA1C-208ENST00000552125 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
TUBA1C-208ENST00000552125 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
TUBA1C-208ENST00000552125 TET3O43151 1660 aa16.61■□□□□ 0.25
TUBA1C-208ENST00000552125 SYNMO15061 1565 aa16.6■□□□□ 0.25
TUBA1C-208ENST00000552125 PIK3C2BO00750 1634 aa16.6■□□□□ 0.25
TUBA1C-208ENST00000552125 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
TUBA1C-208ENST00000552125 SLC52A1Q9NWF4 448 aa16.59■□□□□ 0.25
TUBA1C-208ENST00000552125 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
TUBA1C-208ENST00000552125 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
TUBA1C-208ENST00000552125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
TUBA1C-208ENST00000552125 ADGRB3O60242 1522 aa16.56■□□□□ 0.24
TUBA1C-208ENST00000552125 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
TUBA1C-208ENST00000552125 RRBP1Q9P2E9 1410 aaKnown RBP16.54■□□□□ 0.24
TUBA1C-208ENST00000552125 IDI1Q13907 227 aa16.54■□□□□ 0.24
TUBA1C-208ENST00000552125 LTKP29376 864 aa16.53■□□□□ 0.24
TUBA1C-208ENST00000552125 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
TUBA1C-208ENST00000552125 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.24
TUBA1C-208ENST00000552125 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
TUBA1C-208ENST00000552125 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
TUBA1C-208ENST00000552125 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
TUBA1C-208ENST00000552125 TOM1O60784 492 aa16.49■□□□□ 0.23
TUBA1C-208ENST00000552125 E9PCH4 1651 aa16.49■□□□□ 0.23
TUBA1C-208ENST00000552125 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
TUBA1C-208ENST00000552125 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
TUBA1C-208ENST00000552125 TMEM131LA2VDJ0 1609 aa16.48■□□□□ 0.23
TUBA1C-208ENST00000552125 STAG3Q9UJ98 1225 aa16.46■□□□□ 0.23
TUBA1C-208ENST00000552125 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
TUBA1C-208ENST00000552125 NKTRP30414 1462 aaKnown RBP16.43■□□□□ 0.22
TUBA1C-208ENST00000552125 NUP155O75694 1391 aa16.43■□□□□ 0.22
TUBA1C-208ENST00000552125 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
TUBA1C-208ENST00000552125 HDGFP51858 240 aaKnown RBP16.43■□□□□ 0.22
TUBA1C-208ENST00000552125 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
TUBA1C-208ENST00000552125 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
TUBA1C-208ENST00000552125 KCNA6P17658 529 aa16.41■□□□□ 0.22
TUBA1C-208ENST00000552125 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms