RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 KIF3BO15066 747 aa34.86■■■■□ 3.17
SMARCD1-212ENST00000551966 TNRQ92752 1358 aa34.79■■■■□ 3.16
SMARCD1-212ENST00000551966 RSPH4AQ5TD94 716 aa34.77■■■■□ 3.16
SMARCD1-212ENST00000551966 CCDC141Q6ZP82 1450 aa34.77■■■■□ 3.16
SMARCD1-212ENST00000551966 NCOA2Q15596 1464 aa34.76■■■■□ 3.15
SMARCD1-212ENST00000551966 WASHC2CQ9Y4E1 1318 aa34.75■■■■□ 3.15
SMARCD1-212ENST00000551966 CAMSAP2Q08AD1 1489 aa34.74■■■■□ 3.15
SMARCD1-212ENST00000551966 PZPP20742 1482 aa34.73■■■■□ 3.15
SMARCD1-212ENST00000551966 KDM5DQ9BY66 1539 aa34.71■■■■□ 3.15
SMARCD1-212ENST00000551966 NEURL4Q96JN8 1562 aa34.7■■■■□ 3.15
SMARCD1-212ENST00000551966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.68■■■■□ 3.147e-6■■■□□ 16.5
SMARCD1-212ENST00000551966 MIA2Q96PC5 1412 aa34.67■■■■□ 3.14
SMARCD1-212ENST00000551966 ANKLE2Q86XL3 938 aa34.66■■■■□ 3.14
SMARCD1-212ENST00000551966 FAM135AQ9P2D6 1515 aa34.65■■■■□ 3.14
SMARCD1-212ENST00000551966 SHANK2Q9UPX8 1470 aa34.65■■■■□ 3.14
SMARCD1-212ENST00000551966 POLR1AO95602 1720 aaPredicted RBP34.65■■■■□ 3.14
SMARCD1-212ENST00000551966 TSPY4P0CV99 314 aa34.64■■■■□ 3.14
SMARCD1-212ENST00000551966 TSPY10P0CW01 314 aa34.64■■■■□ 3.14
SMARCD1-212ENST00000551966 THEMISQ8N1K5 641 aaPredicted RBP34.64■■■■□ 3.14
SMARCD1-212ENST00000551966 HSPA1LP34931 641 aa34.62■■■■□ 3.13
SMARCD1-212ENST00000551966 PIP4K2BP78356 416 aa34.62■■■■□ 3.13
SMARCD1-212ENST00000551966 CPS1P31327 1500 aa34.61■■■■□ 3.13
SMARCD1-212ENST00000551966 ARHGEF5Q12774 1597 aa34.61■■■■□ 3.13
SMARCD1-212ENST00000551966 TOM1O60784 492 aa34.59■■■■□ 3.13
SMARCD1-212ENST00000551966 SCAF1Q9H7N4 1312 aaKnown RBP34.58■■■■□ 3.13
SMARCD1-212ENST00000551966 NLRP1Q9C000 1473 aa34.58■■■■□ 3.13
SMARCD1-212ENST00000551966 UGGT1Q9NYU2 1555 aa34.56■■■■□ 3.12
SMARCD1-212ENST00000551966 VWDEQ8N2E2 1590 aa34.55■■■■□ 3.12
SMARCD1-212ENST00000551966 MED14O60244 1454 aa34.54■■■■□ 3.12
SMARCD1-212ENST00000551966 NPHP4O75161 1426 aaPredicted RBP34.54■■■■□ 3.12
SMARCD1-212ENST00000551966 LRRC9Q6ZRR7 1453 aa34.5■■■■□ 3.11
SMARCD1-212ENST00000551966 DEPDC5O75140 1603 aa34.49■■■■□ 3.11
SMARCD1-212ENST00000551966 ABCC3O15438 1527 aa34.47■■■■□ 3.11
SMARCD1-212ENST00000551966 KANK4Q5T7N3 995 aaPredicted RBP34.47■■■■□ 3.11
SMARCD1-212ENST00000551966 RNF17Q9BXT8 1623 aaKnown RBP34.47■■■■□ 3.11
SMARCD1-212ENST00000551966 MAST1Q9Y2H9 1570 aa34.45■■■■□ 3.1
SMARCD1-212ENST00000551966 ALKQ9UM73 1620 aa34.44■■■■□ 3.1
SMARCD1-212ENST00000551966 LOC105371045A0A1W2PR82 267 aa34.42■■■■□ 3.1
SMARCD1-212ENST00000551966 MED1Q15648 1581 aaPredicted RBP34.41■■■■□ 3.1
SMARCD1-212ENST00000551966 VPS8Q8N3P4 1428 aa34.41■■■■□ 3.1
SMARCD1-212ENST00000551966 ERVK-7P63135 1459 aa34.39■■■■□ 3.1
SMARCD1-212ENST00000551966 IQGAP1P46940 1657 aa34.39■■■■□ 3.1
SMARCD1-212ENST00000551966 MROH1Q8NDA8 1641 aa34.38■■■■□ 3.09
SMARCD1-212ENST00000551966 STRCP1A6NGW2 1772 aa34.38■■■■□ 3.09
SMARCD1-212ENST00000551966 ZC3H13Q5T200 1668 aaKnown RBP34.37■■■■□ 3.09
SMARCD1-212ENST00000551966 EIF2AK4Q9P2K8 1649 aaKnown RBP34.35■■■■□ 3.09
SMARCD1-212ENST00000551966 LRRC7Q96NW7 1537 aa34.35■■■■□ 3.09
SMARCD1-212ENST00000551966 MYOM3Q5VTT5 1437 aa34.32■■■■□ 3.08
SMARCD1-212ENST00000551966 CFAP65Q6ZU64 1925 aaKnown RBP34.32■■■■□ 3.08
SMARCD1-212ENST00000551966 CEP152O94986 1710 aa34.3■■■■□ 3.08
SMARCD1-212ENST00000551966 LTKP29376 864 aa34.29■■■■□ 3.08
SMARCD1-212ENST00000551966 MAP3K1Q13233 1512 aa34.29■■■■□ 3.08
SMARCD1-212ENST00000551966 UBR1Q8IWV7 1749 aa34.27■■■■□ 3.08
SMARCD1-212ENST00000551966 DUOX2Q9NRD8 1548 aa34.27■■■■□ 3.08
SMARCD1-212ENST00000551966 SENP3Q9H4L4 574 aaPredicted RBP34.25■■■■□ 3.07
SMARCD1-212ENST00000551966 TXNDC2Q86VQ3 553 aa34.24■■■■□ 3.07
SMARCD1-212ENST00000551966 SCAF11Q99590 1463 aaKnown RBP34.22■■■■□ 3.07
SMARCD1-212ENST00000551966 RRP7BPQ9NSQ0 103 aa34.22■■■■□ 3.07
SMARCD1-212ENST00000551966 ARHGAP31Q2M1Z3 1444 aa34.21■■■■□ 3.07
SMARCD1-212ENST00000551966 ARHGAP23Q9P227 1491 aa34.21■■■■□ 3.07
SMARCD1-212ENST00000551966 KIF15Q9NS87 1388 aa34.2■■■■□ 3.07
SMARCD1-212ENST00000551966 ABCC5O15440 1437 aa34.2■■■■□ 3.06
SMARCD1-212ENST00000551966 SYNMO15061 1565 aa34.19■■■■□ 3.06
SMARCD1-212ENST00000551966 SLIT1O75093 1534 aa34.18■■■■□ 3.06
SMARCD1-212ENST00000551966 PHF23Q9BUL5 403 aaPredicted RBP34.17■■■■□ 3.06
SMARCD1-212ENST00000551966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.068e-8■■□□□ 12.8
SMARCD1-212ENST00000551966 PRDM15P57071 1507 aaPredicted RBP34.14■■■■□ 3.06
SMARCD1-212ENST00000551966 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
SMARCD1-212ENST00000551966 EID1Q9Y6B2 187 aa34.11■■■■□ 3.05
SMARCD1-212ENST00000551966 TMEM2Q9UHN6 1383 aa34.08■■■■□ 3.05
SMARCD1-212ENST00000551966 XIRP1Q702N8 1843 aaKnown RBP34.07■■■■□ 3.04
SMARCD1-212ENST00000551966 CROCC2H7BZ55 1655 aa34.07■■■■□ 3.04
SMARCD1-212ENST00000551966 PIK3C2BO00750 1634 aa34.07■■■■□ 3.04
SMARCD1-212ENST00000551966 PTPN23Q9H3S7 1636 aa34.07■■■■□ 3.04
SMARCD1-212ENST00000551966 DAPK1P53355 1430 aa34.06■■■■□ 3.04
SMARCD1-212ENST00000551966 IDI1Q13907 227 aa34.06■■■■□ 3.04
SMARCD1-212ENST00000551966 CHIC2Q9UKJ5 165 aa34.03■■■■□ 3.04
SMARCD1-212ENST00000551966 RGS17Q9UGC6 210 aaPredicted RBP34.02■■■■□ 3.04
SMARCD1-212ENST00000551966 STAG3Q9UJ98 1225 aa34.02■■■■□ 3.04
SMARCD1-212ENST00000551966 KANK1Q14678 1352 aa34.01■■■■□ 3.04
SMARCD1-212ENST00000551966 LMTK2Q8IWU2 1503 aa33.97■■■■□ 3.03
SMARCD1-212ENST00000551966 FGD6Q6ZV73 1430 aa33.96■■■■□ 3.03
SMARCD1-212ENST00000551966 KCNA6P17658 529 aa33.96■■■■□ 3.03
SMARCD1-212ENST00000551966 APLP2Q06481 763 aa33.96■■■■□ 3.03
SMARCD1-212ENST00000551966 SLC26A8Q96RN1 970 aa33.96■■■■□ 3.03
SMARCD1-212ENST00000551966 FAM135BQ49AJ0 1406 aa33.96■■■■□ 3.03
SMARCD1-212ENST00000551966 EFCAB6Q5THR3 1501 aa33.95■■■■□ 3.03
SMARCD1-212ENST00000551966 TMEM94Q12767 1356 aa33.95■■■■□ 3.02
SMARCD1-212ENST00000551966 ANKRD30AQ9BXX3 1397 aa33.94■■■■□ 3.02
SMARCD1-212ENST00000551966 TET3O43151 1660 aa33.93■■■■□ 3.02
SMARCD1-212ENST00000551966 RBM33Q96EV2 1170 aaKnown RBP33.92■■■■□ 3.02
SMARCD1-212ENST00000551966 KDM5AP29375 1690 aaKnown RBP33.92■■■■□ 3.02
SMARCD1-212ENST00000551966 NOS1P29475 1434 aa33.9■■■■□ 3.02
SMARCD1-212ENST00000551966 PROSER2Q86WR7 435 aaPredicted RBP33.89■■■■□ 3.02
SMARCD1-212ENST00000551966 SLC52A1Q9NWF4 448 aa33.84■■■■□ 3.01
SMARCD1-212ENST00000551966 ADGRB3O60242 1522 aa33.79■■■■□ 3
SMARCD1-212ENST00000551966 POTEAQ6S8J7 498 aa33.78■■■■□ 3
SMARCD1-212ENST00000551966 ADGRL2O95490 1459 aa33.77■■■■□ 3
SMARCD1-212ENST00000551966 ROBO1Q9Y6N7 1651 aa33.77■■■■□ 3
SMARCD1-212ENST00000551966 BCANQ96GW7 911 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 333.3 ms