RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DHX29Q7Z478 1369 aaKnown RBP24.9■■□□□ 1.58
CACNB3-220ENST00000551716 RTEL1-TNFRSF6BF6WH68 1400 aa24.89■■□□□ 1.58
CACNB3-220ENST00000551716 FBXO31Q5XUX0 539 aaPredicted RBP24.89■■□□□ 1.58
CACNB3-220ENST00000551716 ADGBQ8N7X0 1667 aa24.87■■□□□ 1.57
CACNB3-220ENST00000551716 KIF3BO15066 747 aa24.86■■□□□ 1.57
CACNB3-220ENST00000551716 WASHC2CQ9Y4E1 1318 aa24.86■■□□□ 1.57
CACNB3-220ENST00000551716 MTUS2Q5JR59 1369 aa24.84■■□□□ 1.57
CACNB3-220ENST00000551716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.84■■□□□ 1.57
CACNB3-220ENST00000551716 NEURL4Q96JN8 1562 aa24.83■■□□□ 1.57
CACNB3-220ENST00000551716 PZPP20742 1482 aa24.83■■□□□ 1.56
CACNB3-220ENST00000551716 RSPH4AQ5TD94 716 aa24.82■■□□□ 1.56
CACNB3-220ENST00000551716 MIA2Q96PC5 1412 aa24.82■■□□□ 1.56
CACNB3-220ENST00000551716 ZNF644Q9H582 1327 aaPredicted RBP24.82■■□□□ 1.56
CACNB3-220ENST00000551716 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
CACNB3-220ENST00000551716 NPHP4O75161 1426 aaPredicted RBP24.81■■□□□ 1.56
CACNB3-220ENST00000551716 MED14O60244 1454 aa24.81■■□□□ 1.56
CACNB3-220ENST00000551716 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
CACNB3-220ENST00000551716 NLRP1Q9C000 1473 aa24.8■■□□□ 1.56
CACNB3-220ENST00000551716 MBD5Q9P267 1494 aa24.8■■□□□ 1.56
CACNB3-220ENST00000551716 VWDEQ8N2E2 1590 aa24.79■■□□□ 1.56
CACNB3-220ENST00000551716 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
CACNB3-220ENST00000551716 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
CACNB3-220ENST00000551716 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
CACNB3-220ENST00000551716 DEPDC5O75140 1603 aa24.73■■□□□ 1.55
CACNB3-220ENST00000551716 ALKQ9UM73 1620 aa24.71■■□□□ 1.55
CACNB3-220ENST00000551716 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
CACNB3-220ENST00000551716 LRRC7Q96NW7 1537 aa24.7■■□□□ 1.54
CACNB3-220ENST00000551716 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
CACNB3-220ENST00000551716 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
CACNB3-220ENST00000551716 CCDC141Q6ZP82 1450 aa24.65■■□□□ 1.54
CACNB3-220ENST00000551716 RGS17Q9UGC6 210 aaPredicted RBP24.65■■□□□ 1.54
CACNB3-220ENST00000551716 TIAM1Q13009 1591 aa24.64■■□□□ 1.54
CACNB3-220ENST00000551716 CEP162Q5TB80 1403 aa24.64■■□□□ 1.54
CACNB3-220ENST00000551716 IQGAP1P46940 1657 aa24.63■■□□□ 1.53
CACNB3-220ENST00000551716 RNF17Q9BXT8 1623 aaKnown RBP24.61■■□□□ 1.53
CACNB3-220ENST00000551716 EHBP1L1Q8N3D4 1523 aa24.61■■□□□ 1.53
CACNB3-220ENST00000551716 SYNMO15061 1565 aa24.59■■□□□ 1.53
CACNB3-220ENST00000551716 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
CACNB3-220ENST00000551716 FAM135BQ49AJ0 1406 aa24.54■■□□□ 1.52
CACNB3-220ENST00000551716 EID1Q9Y6B2 187 aa24.54■■□□□ 1.52
CACNB3-220ENST00000551716 CAMSAP2Q08AD1 1489 aa24.53■■□□□ 1.52
CACNB3-220ENST00000551716 SCAF11Q99590 1463 aaKnown RBP24.52■■□□□ 1.52
CACNB3-220ENST00000551716 STRCP1A6NGW2 1772 aa24.52■■□□□ 1.52
CACNB3-220ENST00000551716 ERVK-7P63135 1459 aa24.51■■□□□ 1.51
CACNB3-220ENST00000551716 LTKP29376 864 aa24.5■■□□□ 1.51
CACNB3-220ENST00000551716 POTEAQ6S8J7 498 aa24.5■■□□□ 1.51
CACNB3-220ENST00000551716 ABCC3O15438 1527 aa24.5■■□□□ 1.51
CACNB3-220ENST00000551716 NCOA2Q15596 1464 aa24.48■■□□□ 1.51
CACNB3-220ENST00000551716 ARHGEF5Q12774 1597 aa24.47■■□□□ 1.51
CACNB3-220ENST00000551716 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
CACNB3-220ENST00000551716 ARHGAP23Q9P227 1491 aa24.44■■□□□ 1.5
CACNB3-220ENST00000551716 SLIT1O75093 1534 aa24.43■■□□□ 1.5
CACNB3-220ENST00000551716 KCNA6P17658 529 aa24.41■■□□□ 1.5
CACNB3-220ENST00000551716 STAG3Q9UJ98 1225 aa24.4■■□□□ 1.5
CACNB3-220ENST00000551716 UBR1Q8IWV7 1749 aa24.39■■□□□ 1.5
CACNB3-220ENST00000551716 TMEM94Q12767 1356 aa24.39■■□□□ 1.49
CACNB3-220ENST00000551716 PROSER2Q86WR7 435 aaPredicted RBP24.38■■□□□ 1.49
CACNB3-220ENST00000551716 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
CACNB3-220ENST00000551716 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
CACNB3-220ENST00000551716 TMEM2Q9UHN6 1383 aa24.37■■□□□ 1.49
CACNB3-220ENST00000551716 MAST1Q9Y2H9 1570 aa24.35■■□□□ 1.49
CACNB3-220ENST00000551716 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
CACNB3-220ENST00000551716 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
CACNB3-220ENST00000551716 XIRP1Q702N8 1843 aaKnown RBP24.3■■□□□ 1.48
CACNB3-220ENST00000551716 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
CACNB3-220ENST00000551716 JCADQ9P266 1359 aa24.29■■□□□ 1.48
CACNB3-220ENST00000551716 MROH1Q8NDA8 1641 aa24.29■■□□□ 1.48
CACNB3-220ENST00000551716 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
CACNB3-220ENST00000551716 MSH6P52701 1360 aa24.28■■□□□ 1.48
CACNB3-220ENST00000551716 KANK1Q14678 1352 aa24.27■■□□□ 1.48
CACNB3-220ENST00000551716 CFAP65Q6ZU64 1925 aaKnown RBP24.26■■□□□ 1.47
CACNB3-220ENST00000551716 IDI1Q13907 227 aa24.26■■□□□ 1.47
CACNB3-220ENST00000551716 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
CACNB3-220ENST00000551716 ROBO1Q9Y6N7 1651 aa24.25■■□□□ 1.47
CACNB3-220ENST00000551716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.25■■□□□ 1.47
CACNB3-220ENST00000551716 ZNF772Q68DY9 489 aaPredicted RBP24.24■■□□□ 1.47
CACNB3-220ENST00000551716 RBM33Q96EV2 1170 aaKnown RBP24.23■■□□□ 1.47
CACNB3-220ENST00000551716 BCANQ96GW7 911 aa24.23■■□□□ 1.47
CACNB3-220ENST00000551716 PRDM15P57071 1507 aaPredicted RBP24.23■■□□□ 1.47
CACNB3-220ENST00000551716 CEP152O94986 1710 aa24.23■■□□□ 1.47
CACNB3-220ENST00000551716 EFCAB6Q5THR3 1501 aa24.22■■□□□ 1.47
CACNB3-220ENST00000551716 NKTRP30414 1462 aaKnown RBP24.22■■□□□ 1.47
CACNB3-220ENST00000551716 ERBINQ96RT1 1412 aa24.22■■□□□ 1.47
CACNB3-220ENST00000551716 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
CACNB3-220ENST00000551716 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
CACNB3-220ENST00000551716 RRP7BPQ9NSQ0 103 aa24.21■■□□□ 1.47
CACNB3-220ENST00000551716 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.46
CACNB3-220ENST00000551716 UPF1Q92900 1129 aaKnown RBP eCLIP24.2■■□□□ 1.46
CACNB3-220ENST00000551716 TET3O43151 1660 aa24.19■■□□□ 1.46
CACNB3-220ENST00000551716 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
CACNB3-220ENST00000551716 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
CACNB3-220ENST00000551716 PIK3C2BO00750 1634 aa24.19■■□□□ 1.46
CACNB3-220ENST00000551716 KDM5AP29375 1690 aaKnown RBP24.18■■□□□ 1.46
CACNB3-220ENST00000551716 MEX3CQ5U5Q3 659 aaKnown RBP24.18■■□□□ 1.46
CACNB3-220ENST00000551716 FGD6Q6ZV73 1430 aa24.14■■□□□ 1.45
CACNB3-220ENST00000551716 NCOA3Q9Y6Q9 1424 aa24.12■■□□□ 1.45
CACNB3-220ENST00000551716 PHLPP1O60346 1717 aa24.12■■□□□ 1.45
CACNB3-220ENST00000551716 RXRBP28702 533 aa24.11■■□□□ 1.45
CACNB3-220ENST00000551716 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
CACNB3-220ENST00000551716 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms