RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 GPATCH8Q9UKJ3 1502 aaKnown RBP22.25■■□□□ 1.15
TMEM106C-217ENST00000551705 HNRNPMP52272 730 aaKnown RBP eCLIP22.24■■□□□ 1.15
TMEM106C-217ENST00000551705 RGS17Q9UGC6 210 aaPredicted RBP22.24■■□□□ 1.15
TMEM106C-217ENST00000551705 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
TMEM106C-217ENST00000551705 TNRQ92752 1358 aa22.22■■□□□ 1.15
TMEM106C-217ENST00000551705 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
TMEM106C-217ENST00000551705 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
TMEM106C-217ENST00000551705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
TMEM106C-217ENST00000551705 LRRC7Q96NW7 1537 aa22.2■■□□□ 1.14
TMEM106C-217ENST00000551705 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
TMEM106C-217ENST00000551705 MED14O60244 1454 aa22.19■■□□□ 1.14
TMEM106C-217ENST00000551705 PZPP20742 1482 aa22.18■■□□□ 1.14
TMEM106C-217ENST00000551705 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
TMEM106C-217ENST00000551705 XIRP1Q702N8 1843 aaKnown RBP22.17■■□□□ 1.14
TMEM106C-217ENST00000551705 PLEKHH2Q8IVE3 1493 aa22.17■■□□□ 1.14
TMEM106C-217ENST00000551705 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
TMEM106C-217ENST00000551705 KDM5DQ9BY66 1539 aa22.16■■□□□ 1.14
TMEM106C-217ENST00000551705 ZC3H13Q5T200 1668 aaKnown RBP22.15■■□□□ 1.14
TMEM106C-217ENST00000551705 UGGT1Q9NYU2 1555 aa22.15■■□□□ 1.14
TMEM106C-217ENST00000551705 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
TMEM106C-217ENST00000551705 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
TMEM106C-217ENST00000551705 FAM135AQ9P2D6 1515 aa22.1■■□□□ 1.13
TMEM106C-217ENST00000551705 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
TMEM106C-217ENST00000551705 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
TMEM106C-217ENST00000551705 CFDP1Q9UEE9 299 aaPredicted RBP22.06■■□□□ 1.12
TMEM106C-217ENST00000551705 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
TMEM106C-217ENST00000551705 MBD5Q9P267 1494 aa22.04■■□□□ 1.12
TMEM106C-217ENST00000551705 MIA2Q96PC5 1412 aa22.04■■□□□ 1.12
TMEM106C-217ENST00000551705 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
TMEM106C-217ENST00000551705 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
TMEM106C-217ENST00000551705 DHX29Q7Z478 1369 aaKnown RBP22.02■■□□□ 1.12
TMEM106C-217ENST00000551705 ZNF644Q9H582 1327 aaPredicted RBP22.02■■□□□ 1.12
TMEM106C-217ENST00000551705 UBR1Q8IWV7 1749 aa22.01■■□□□ 1.11
TMEM106C-217ENST00000551705 RTEL1-TNFRSF6BF6WH68 1400 aa22■■□□□ 1.11
TMEM106C-217ENST00000551705 KIF3BO15066 747 aa21.99■■□□□ 1.11
TMEM106C-217ENST00000551705 ROBO1Q9Y6N7 1651 aa21.98■■□□□ 1.11
TMEM106C-217ENST00000551705 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
TMEM106C-217ENST00000551705 WASHC2CQ9Y4E1 1318 aa21.95■■□□□ 1.1
TMEM106C-217ENST00000551705 CEP152O94986 1710 aa21.93■■□□□ 1.1
TMEM106C-217ENST00000551705 ABCC3O15438 1527 aa21.92■■□□□ 1.1
TMEM106C-217ENST00000551705 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
TMEM106C-217ENST00000551705 ERVK-7P63135 1459 aa21.91■■□□□ 1.1
TMEM106C-217ENST00000551705 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
TMEM106C-217ENST00000551705 FAM135BQ49AJ0 1406 aa21.9■■□□□ 1.1
TMEM106C-217ENST00000551705 NCOA2Q15596 1464 aa21.89■■□□□ 1.09
TMEM106C-217ENST00000551705 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
TMEM106C-217ENST00000551705 EHBP1L1Q8N3D4 1523 aa21.88■■□□□ 1.09
TMEM106C-217ENST00000551705 MROH1Q8NDA8 1641 aa21.87■■□□□ 1.09
TMEM106C-217ENST00000551705 PHLPP1O60346 1717 aa21.86■■□□□ 1.09
TMEM106C-217ENST00000551705 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
TMEM106C-217ENST00000551705 CAMSAP2Q08AD1 1489 aa21.86■■□□□ 1.09
TMEM106C-217ENST00000551705 SLIT1O75093 1534 aa21.85■■□□□ 1.09
TMEM106C-217ENST00000551705 ARHGAP23Q9P227 1491 aa21.85■■□□□ 1.09
TMEM106C-217ENST00000551705 EIF2AK4Q9P2K8 1649 aaKnown RBP21.81■■□□□ 1.08
TMEM106C-217ENST00000551705 LTKP29376 864 aa21.81■■□□□ 1.08
TMEM106C-217ENST00000551705 TMEM94Q12767 1356 aa21.8■■□□□ 1.08
TMEM106C-217ENST00000551705 ARHGEF5Q12774 1597 aa21.79■■□□□ 1.08
TMEM106C-217ENST00000551705 PIK3C2BO00750 1634 aa21.79■■□□□ 1.08
TMEM106C-217ENST00000551705 LRRC9Q6ZRR7 1453 aa21.78■■□□□ 1.08
TMEM106C-217ENST00000551705 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
TMEM106C-217ENST00000551705 LRP6O75581 1613 aa21.77■■□□□ 1.07
TMEM106C-217ENST00000551705 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.07
TMEM106C-217ENST00000551705 UPF1Q92900 1129 aaKnown RBP eCLIP21.76■■□□□ 1.07
TMEM106C-217ENST00000551705 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
TMEM106C-217ENST00000551705 NWD1Q149M9 1564 aa21.74■■□□□ 1.07
TMEM106C-217ENST00000551705 RBM33Q96EV2 1170 aaKnown RBP21.72■■□□□ 1.07
TMEM106C-217ENST00000551705 MAST1Q9Y2H9 1570 aa21.72■■□□□ 1.07
TMEM106C-217ENST00000551705 JCADQ9P266 1359 aa21.71■■□□□ 1.07
TMEM106C-217ENST00000551705 PRDM15P57071 1507 aaPredicted RBP21.7■■□□□ 1.07
TMEM106C-217ENST00000551705 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.06
TMEM106C-217ENST00000551705 TRIM52Q96A61 297 aa21.69■■□□□ 1.06
TMEM106C-217ENST00000551705 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
TMEM106C-217ENST00000551705 TET3O43151 1660 aa21.68■■□□□ 1.06
TMEM106C-217ENST00000551705 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
TMEM106C-217ENST00000551705 SHPRHQ149N8 1683 aa21.66■■□□□ 1.06
TMEM106C-217ENST00000551705 TMEM2Q9UHN6 1383 aa21.66■■□□□ 1.06
TMEM106C-217ENST00000551705 FOXD1Q16676 465 aa21.66■■□□□ 1.06
TMEM106C-217ENST00000551705 EID1Q9Y6B2 187 aa21.64■■□□□ 1.05
TMEM106C-217ENST00000551705 EFCAB6Q5THR3 1501 aa21.64■■□□□ 1.05
TMEM106C-217ENST00000551705 PROSER2Q86WR7 435 aaPredicted RBP21.63■■□□□ 1.05
TMEM106C-217ENST00000551705 KCNA6P17658 529 aa21.62■■□□□ 1.05
TMEM106C-217ENST00000551705 RSPH4AQ5TD94 716 aa21.62■■□□□ 1.05
TMEM106C-217ENST00000551705 MSH6P52701 1360 aa21.61■■□□□ 1.05
TMEM106C-217ENST00000551705 CHD2O14647 1828 aaKnown RBP21.6■■□□□ 1.05
TMEM106C-217ENST00000551705 ARHGAP31Q2M1Z3 1444 aa21.6■■□□□ 1.05
TMEM106C-217ENST00000551705 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
TMEM106C-217ENST00000551705 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
TMEM106C-217ENST00000551705 SLC26A8Q96RN1 970 aa21.59■■□□□ 1.05
TMEM106C-217ENST00000551705 AHDC1Q5TGY3 1603 aaPredicted RBP21.58■■□□□ 1.04
TMEM106C-217ENST00000551705 DUOX2Q9NRD8 1548 aa21.57■■□□□ 1.04
TMEM106C-217ENST00000551705 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
TMEM106C-217ENST00000551705 ZNF772Q68DY9 489 aaPredicted RBP21.57■■□□□ 1.04
TMEM106C-217ENST00000551705 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
TMEM106C-217ENST00000551705 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
TMEM106C-217ENST00000551705 CDK12Q9NYV4 1490 aaPredicted RBP21.56■■□□□ 1.04
TMEM106C-217ENST00000551705 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
TMEM106C-217ENST00000551705 ADGRB3O60242 1522 aa21.55■■□□□ 1.04
TMEM106C-217ENST00000551705 MYO5BQ9ULV0 1848 aa21.55■■□□□ 1.04
TMEM106C-217ENST00000551705 DIP2AQ14689 1571 aa21.54■■□□□ 1.04
TMEM106C-217ENST00000551705 CROCC2H7BZ55 1655 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms