RNA–Protein interactions for RNA: ENST00000551310.1

ATP2B1-209, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-209ENST00000551310 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
ATP2B1-209ENST00000551310 MAP3K1Q13233 1512 aa25.41■■□□□ 1.66
ATP2B1-209ENST00000551310 WASHC2CQ9Y4E1 1318 aa25.4■■□□□ 1.66
ATP2B1-209ENST00000551310 FAM135AQ9P2D6 1515 aa25.4■■□□□ 1.66
ATP2B1-209ENST00000551310 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
ATP2B1-209ENST00000551310 FBXO31Q5XUX0 539 aaPredicted RBP25.39■■□□□ 1.66
ATP2B1-209ENST00000551310 IQSEC2Q5JU85 1478 aa25.39■■□□□ 1.65
ATP2B1-209ENST00000551310 A2ML1A8K2U0 1454 aa25.38■■□□□ 1.65
ATP2B1-209ENST00000551310 KDM5DQ9BY66 1539 aa25.36■■□□□ 1.65
ATP2B1-209ENST00000551310 PZPP20742 1482 aa25.35■■□□□ 1.65
ATP2B1-209ENST00000551310 TNRQ92752 1358 aa25.35■■□□□ 1.65
ATP2B1-209ENST00000551310 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
ATP2B1-209ENST00000551310 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
ATP2B1-209ENST00000551310 MYOM3Q5VTT5 1437 aa25.31■■□□□ 1.64
ATP2B1-209ENST00000551310 DNMT1P26358 1616 aaKnown RBP25.31■■□□□ 1.64
ATP2B1-209ENST00000551310 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
ATP2B1-209ENST00000551310 THEMISQ8N1K5 641 aaPredicted RBP25.27■■□□□ 1.64
ATP2B1-209ENST00000551310 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
ATP2B1-209ENST00000551310 ANKLE2Q86XL3 938 aa25.24■■□□□ 1.63
ATP2B1-209ENST00000551310 APLP2Q06481 763 aa25.23■■□□□ 1.63
ATP2B1-209ENST00000551310 RNF17Q9BXT8 1623 aaKnown RBP25.23■■□□□ 1.63
ATP2B1-209ENST00000551310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.63
ATP2B1-209ENST00000551310 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
ATP2B1-209ENST00000551310 ABCC3O15438 1527 aa25.19■■□□□ 1.62
ATP2B1-209ENST00000551310 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
ATP2B1-209ENST00000551310 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
ATP2B1-209ENST00000551310 DISP3Q9P2K9 1392 aa25.17■■□□□ 1.62
ATP2B1-209ENST00000551310 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
ATP2B1-209ENST00000551310 NEURL4Q96JN8 1562 aa25.16■■□□□ 1.62
ATP2B1-209ENST00000551310 ABCC5O15440 1437 aa25.15■■□□□ 1.62
ATP2B1-209ENST00000551310 ZC3H13Q5T200 1668 aaKnown RBP25.14■■□□□ 1.62
ATP2B1-209ENST00000551310 KIF15Q9NS87 1388 aa25.14■■□□□ 1.61
ATP2B1-209ENST00000551310 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.61
ATP2B1-209ENST00000551310 POLR1AO95602 1720 aaPredicted RBP25.13■■□□□ 1.61
ATP2B1-209ENST00000551310 MED14O60244 1454 aa25.13■■□□□ 1.61
ATP2B1-209ENST00000551310 SHANK2Q9UPX8 1470 aa25.13■■□□□ 1.61
ATP2B1-209ENST00000551310 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
ATP2B1-209ENST00000551310 RRP7BPQ9NSQ0 103 aa25.12■■□□□ 1.61
ATP2B1-209ENST00000551310 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
ATP2B1-209ENST00000551310 CPS1P31327 1500 aa25.1■■□□□ 1.61
ATP2B1-209ENST00000551310 NPHP4O75161 1426 aaPredicted RBP25.1■■□□□ 1.61
ATP2B1-209ENST00000551310 DEPDC5O75140 1603 aa25.09■■□□□ 1.61
ATP2B1-209ENST00000551310 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
ATP2B1-209ENST00000551310 ERBINQ96RT1 1412 aa25.09■■□□□ 1.61
ATP2B1-209ENST00000551310 FGD6Q6ZV73 1430 aa25.08■■□□□ 1.61
ATP2B1-209ENST00000551310 DAPK1P53355 1430 aa25.07■■□□□ 1.6
ATP2B1-209ENST00000551310 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
ATP2B1-209ENST00000551310 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
ATP2B1-209ENST00000551310 TOM1O60784 492 aa25.04■■□□□ 1.6
ATP2B1-209ENST00000551310 PRDM15P57071 1507 aaPredicted RBP25.03■■□□□ 1.6
ATP2B1-209ENST00000551310 VWDEQ8N2E2 1590 aa25.03■■□□□ 1.6
ATP2B1-209ENST00000551310 CROCC2H7BZ55 1655 aa25.02■■□□□ 1.6
ATP2B1-209ENST00000551310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.6
ATP2B1-209ENST00000551310 CEP152O94986 1710 aa25.02■■□□□ 1.6
ATP2B1-209ENST00000551310 ANKRD30AQ9BXX3 1397 aa25.02■■□□□ 1.6
ATP2B1-209ENST00000551310 CHIC2Q9UKJ5 165 aa25■■□□□ 1.59
ATP2B1-209ENST00000551310 KANK1Q14678 1352 aa25■■□□□ 1.59
ATP2B1-209ENST00000551310 CFAP65Q6ZU64 1925 aaKnown RBP25■■□□□ 1.59
ATP2B1-209ENST00000551310 IQGAP1P46940 1657 aa24.97■■□□□ 1.59
ATP2B1-209ENST00000551310 LTKP29376 864 aa24.96■■□□□ 1.59
ATP2B1-209ENST00000551310 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
ATP2B1-209ENST00000551310 UBR1Q8IWV7 1749 aa24.95■■□□□ 1.59
ATP2B1-209ENST00000551310 TXNDC2Q86VQ3 553 aa24.95■■□□□ 1.58
ATP2B1-209ENST00000551310 SCAF11Q99590 1463 aaKnown RBP24.95■■□□□ 1.58
ATP2B1-209ENST00000551310 ARHGAP23Q9P227 1491 aa24.95■■□□□ 1.58
ATP2B1-209ENST00000551310 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
ATP2B1-209ENST00000551310 SOCS7O14512 581 aa24.94■■□□□ 1.58
ATP2B1-209ENST00000551310 SLIT1O75093 1534 aa24.93■■□□□ 1.58
ATP2B1-209ENST00000551310 HSPA1LP34931 641 aa24.93■■□□□ 1.58
ATP2B1-209ENST00000551310 LMTK2Q8IWU2 1503 aa24.92■■□□□ 1.58
ATP2B1-209ENST00000551310 EID1Q9Y6B2 187 aa24.92■■□□□ 1.58
ATP2B1-209ENST00000551310 ADGRL2O95490 1459 aa24.89■■□□□ 1.58
ATP2B1-209ENST00000551310 IDI1Q13907 227 aa24.89■■□□□ 1.58
ATP2B1-209ENST00000551310 FAM50AQ14320 339 aaKnown RBP24.89■■□□□ 1.58
ATP2B1-209ENST00000551310 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.57
ATP2B1-209ENST00000551310 TMEM2Q9UHN6 1383 aa24.89■■□□□ 1.57
ATP2B1-209ENST00000551310 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
ATP2B1-209ENST00000551310 STRCP1A6NGW2 1772 aa24.85■■□□□ 1.57
ATP2B1-209ENST00000551310 NOS1P29475 1434 aa24.84■■□□□ 1.57
ATP2B1-209ENST00000551310 PIK3C2BO00750 1634 aa24.83■■□□□ 1.57
ATP2B1-209ENST00000551310 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
ATP2B1-209ENST00000551310 SLC52A1Q9NWF4 448 aa24.83■■□□□ 1.57
ATP2B1-209ENST00000551310 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
ATP2B1-209ENST00000551310 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
ATP2B1-209ENST00000551310 EFCAB6Q5THR3 1501 aa24.81■■□□□ 1.56
ATP2B1-209ENST00000551310 SYNMO15061 1565 aa24.8■■□□□ 1.56
ATP2B1-209ENST00000551310 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
ATP2B1-209ENST00000551310 KCNA6P17658 529 aa24.73■■□□□ 1.55
ATP2B1-209ENST00000551310 SLC26A8Q96RN1 970 aa24.72■■□□□ 1.55
ATP2B1-209ENST00000551310 TET3O43151 1660 aa24.72■■□□□ 1.55
ATP2B1-209ENST00000551310 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
ATP2B1-209ENST00000551310 ROCK1Q13464 1354 aa24.7■■□□□ 1.55
ATP2B1-209ENST00000551310 MED1Q15648 1581 aaPredicted RBP24.7■■□□□ 1.54
ATP2B1-209ENST00000551310 HDGFP51858 240 aaKnown RBP24.67■■□□□ 1.54
ATP2B1-209ENST00000551310 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
ATP2B1-209ENST00000551310 PROSER2Q86WR7 435 aaPredicted RBP24.65■■□□□ 1.54
ATP2B1-209ENST00000551310 XIRP1Q702N8 1843 aaKnown RBP24.64■■□□□ 1.54
ATP2B1-209ENST00000551310 ZFYVE9O95405 1425 aa24.63■■□□□ 1.53
ATP2B1-209ENST00000551310 FAM135BQ49AJ0 1406 aa24.63■■□□□ 1.53
ATP2B1-209ENST00000551310 BCANQ96GW7 911 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms