RNA–Protein interactions for RNA: ENST00000551236.5

MTA1-219, Transcript of metastasis associated 1, humanhuman

TSL 3

Gene MTA1, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-219ENST00000551236 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
MTA1-219ENST00000551236 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
MTA1-219ENST00000551236 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
MTA1-219ENST00000551236 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
MTA1-219ENST00000551236 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
MTA1-219ENST00000551236 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
MTA1-219ENST00000551236 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
MTA1-219ENST00000551236 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
MTA1-219ENST00000551236 ERBINQ96RT1 1412 aa18.54■□□□□ 0.56
MTA1-219ENST00000551236 PTPRKQ15262 1439 aa18.53■□□□□ 0.56
MTA1-219ENST00000551236 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
MTA1-219ENST00000551236 SETD1BQ9UPS6 1966 aaKnown RBP18.51■□□□□ 0.55
MTA1-219ENST00000551236 ADGRL2O95490 1459 aa18.49■□□□□ 0.55
MTA1-219ENST00000551236 PZPP20742 1482 aa18.49■□□□□ 0.55
MTA1-219ENST00000551236 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
MTA1-219ENST00000551236 ABCC3O15438 1527 aa18.48■□□□□ 0.55
MTA1-219ENST00000551236 MYO3AQ8NEV4 1616 aa18.46■□□□□ 0.55
MTA1-219ENST00000551236 TNRQ92752 1358 aa18.46■□□□□ 0.55
MTA1-219ENST00000551236 ZC3H13Q5T200 1668 aaKnown RBP18.46■□□□□ 0.55
MTA1-219ENST00000551236 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
MTA1-219ENST00000551236 KANK1Q14678 1352 aa18.45■□□□□ 0.54
MTA1-219ENST00000551236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■□□□□ 9.1
MTA1-219ENST00000551236 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
MTA1-219ENST00000551236 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
MTA1-219ENST00000551236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.43■□□□□ 0.541e-7■■■■■ 35.6
MTA1-219ENST00000551236 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
MTA1-219ENST00000551236 ITGAEP38570 1179 aa18.42■□□□□ 0.54
MTA1-219ENST00000551236 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
MTA1-219ENST00000551236 ANKRD50Q9ULJ7 1429 aa18.41■□□□□ 0.54
MTA1-219ENST00000551236 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
MTA1-219ENST00000551236 A2ML1A8K2U0 1454 aa18.4■□□□□ 0.54
MTA1-219ENST00000551236 CAMSAP1Q5T5Y3 1602 aa18.4■□□□□ 0.54
MTA1-219ENST00000551236 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
MTA1-219ENST00000551236 CEP152O94986 1710 aa18.39■□□□□ 0.53
MTA1-219ENST00000551236 ROCK1Q13464 1354 aa18.39■□□□□ 0.53
MTA1-219ENST00000551236 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
MTA1-219ENST00000551236 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
MTA1-219ENST00000551236 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
MTA1-219ENST00000551236 PLA2R1Q13018 1463 aa18.36■□□□□ 0.53
MTA1-219ENST00000551236 SPATA31D1Q6ZQQ2 1576 aa18.36■□□□□ 0.53
MTA1-219ENST00000551236 STRCQ7RTU9 1775 aa18.35■□□□□ 0.53
MTA1-219ENST00000551236 PTPRTO14522 1441 aa18.35■□□□□ 0.53
MTA1-219ENST00000551236 ARHGAP31Q2M1Z3 1444 aa18.35■□□□□ 0.53
MTA1-219ENST00000551236 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
MTA1-219ENST00000551236 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
MTA1-219ENST00000551236 PKD2Q13563 968 aa18.33■□□□□ 0.52
MTA1-219ENST00000551236 VWDEQ8N2E2 1590 aa18.33■□□□□ 0.52
MTA1-219ENST00000551236 UGGT1Q9NYU2 1555 aa18.31■□□□□ 0.52
MTA1-219ENST00000551236 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
MTA1-219ENST00000551236 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
MTA1-219ENST00000551236 UNC13BO14795 1591 aa18.27■□□□□ 0.52
MTA1-219ENST00000551236 ILDR1Q86SU0 546 aaPredicted RBP18.27■□□□□ 0.52
MTA1-219ENST00000551236 ANKLE2Q86XL3 938 aa18.25■□□□□ 0.51
MTA1-219ENST00000551236 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
MTA1-219ENST00000551236 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
MTA1-219ENST00000551236 NUP155O75694 1391 aa18.23■□□□□ 0.51
MTA1-219ENST00000551236 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
MTA1-219ENST00000551236 TET3O43151 1660 aa18.22■□□□□ 0.51
MTA1-219ENST00000551236 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
MTA1-219ENST00000551236 NOS1P29475 1434 aa18.22■□□□□ 0.51
MTA1-219ENST00000551236 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
MTA1-219ENST00000551236 POLR1AO95602 1720 aaPredicted RBP18.2■□□□□ 0.5
MTA1-219ENST00000551236 NAIPQ13075 1403 aa18.19■□□□□ 0.5
MTA1-219ENST00000551236 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
MTA1-219ENST00000551236 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
MTA1-219ENST00000551236 UBR1Q8IWV7 1749 aa18.18■□□□□ 0.5
MTA1-219ENST00000551236 SYNMO15061 1565 aa18.18■□□□□ 0.5
MTA1-219ENST00000551236 NPHP4O75161 1426 aaPredicted RBP18.18■□□□□ 0.5
MTA1-219ENST00000551236 IDI1Q13907 227 aa18.18■□□□□ 0.5
MTA1-219ENST00000551236 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
MTA1-219ENST00000551236 ZNF335Q9H4Z2 1342 aaPredicted RBP18.18■□□□□ 0.5
MTA1-219ENST00000551236 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
MTA1-219ENST00000551236 GCC2Q8IWJ2 1684 aa18.17■□□□□ 0.5
MTA1-219ENST00000551236 HFM1A2PYH4 1435 aa18.16■□□□□ 0.5
MTA1-219ENST00000551236 MED14O60244 1454 aa18.15■□□□□ 0.5
MTA1-219ENST00000551236 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
MTA1-219ENST00000551236 EID1Q9Y6B2 187 aa18.15■□□□□ 0.5
MTA1-219ENST00000551236 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
MTA1-219ENST00000551236 SLIT1O75093 1534 aa18.14■□□□□ 0.49
MTA1-219ENST00000551236 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
MTA1-219ENST00000551236 TMEM2Q9UHN6 1383 aa18.14■□□□□ 0.49
MTA1-219ENST00000551236 ARHGAP23Q9P227 1491 aa18.14■□□□□ 0.49
MTA1-219ENST00000551236 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
MTA1-219ENST00000551236 E9PCH4 1651 aa18.12■□□□□ 0.49
MTA1-219ENST00000551236 TRIM52Q96A61 297 aa18.11■□□□□ 0.49
MTA1-219ENST00000551236 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
MTA1-219ENST00000551236 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
MTA1-219ENST00000551236 LTKP29376 864 aa18.1■□□□□ 0.49
MTA1-219ENST00000551236 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
MTA1-219ENST00000551236 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
MTA1-219ENST00000551236 CPS1P31327 1500 aa18.06■□□□□ 0.48
MTA1-219ENST00000551236 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
MTA1-219ENST00000551236 HDGFP51858 240 aaKnown RBP18.04■□□□□ 0.48
MTA1-219ENST00000551236 BCANQ96GW7 911 aa18.03■□□□□ 0.48
MTA1-219ENST00000551236 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
MTA1-219ENST00000551236 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
MTA1-219ENST00000551236 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
MTA1-219ENST00000551236 SPHKAPQ2M3C7 1700 aa18.01■□□□□ 0.47
MTA1-219ENST00000551236 ZFYVE9O95405 1425 aa18■□□□□ 0.47
MTA1-219ENST00000551236 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms