RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 PTPRKQ15262 1439 aa11.8□□□□□ -0.52
ERBB3-218ENST00000551176 NPATQ14207 1427 aa11.79□□□□□ -0.52
ERBB3-218ENST00000551176 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
ERBB3-218ENST00000551176 DUOX2Q9NRD8 1548 aa11.79□□□□□ -0.52
ERBB3-218ENST00000551176 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 UHRF1BP1Q6BDS2 1440 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 KDM5DQ9BY66 1539 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 MROH1Q8NDA8 1641 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
ERBB3-218ENST00000551176 FBXO31Q5XUX0 539 aaPredicted RBP11.77□□□□□ -0.53
ERBB3-218ENST00000551176 RNF17Q9BXT8 1623 aaKnown RBP11.77□□□□□ -0.53
ERBB3-218ENST00000551176 ANKRD30AQ9BXX3 1397 aa11.77□□□□□ -0.53
ERBB3-218ENST00000551176 ADGRL2O95490 1459 aa11.76□□□□□ -0.53
ERBB3-218ENST00000551176 ERBINQ96RT1 1412 aa11.76□□□□□ -0.53
ERBB3-218ENST00000551176 ABCC3O15438 1527 aa11.76□□□□□ -0.53
ERBB3-218ENST00000551176 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
ERBB3-218ENST00000551176 PZPP20742 1482 aa11.75□□□□□ -0.53
ERBB3-218ENST00000551176 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
ERBB3-218ENST00000551176 PRDM15P57071 1507 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-218ENST00000551176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
ERBB3-218ENST00000551176 TNRQ92752 1358 aa11.71□□□□□ -0.53
ERBB3-218ENST00000551176 ITGAEP38570 1179 aa11.71□□□□□ -0.53
ERBB3-218ENST00000551176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
ERBB3-218ENST00000551176 MYO3AQ8NEV4 1616 aa11.71□□□□□ -0.54
ERBB3-218ENST00000551176 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
ERBB3-218ENST00000551176 DEPDC5O75140 1603 aa11.7□□□□□ -0.54
ERBB3-218ENST00000551176 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
ERBB3-218ENST00000551176 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
ERBB3-218ENST00000551176 ROCK1Q13464 1354 aa11.69□□□□□ -0.54
ERBB3-218ENST00000551176 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
ERBB3-218ENST00000551176 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
ERBB3-218ENST00000551176 VWDEQ8N2E2 1590 aa11.68□□□□□ -0.54
ERBB3-218ENST00000551176 FOXD1Q16676 465 aa11.68□□□□□ -0.54
ERBB3-218ENST00000551176 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
ERBB3-218ENST00000551176 ERVK-7P63135 1459 aa11.68□□□□□ -0.54
ERBB3-218ENST00000551176 ZC3H13Q5T200 1668 aaKnown RBP11.68□□□□□ -0.54
ERBB3-218ENST00000551176 NCKAP5LQ9HCH0 1330 aa11.67□□□□□ -0.54
ERBB3-218ENST00000551176 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
ERBB3-218ENST00000551176 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
ERBB3-218ENST00000551176 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
ERBB3-218ENST00000551176 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
ERBB3-218ENST00000551176 CEP152O94986 1710 aa11.66□□□□□ -0.54
ERBB3-218ENST00000551176 LMTK2Q8IWU2 1503 aa11.66□□□□□ -0.54
ERBB3-218ENST00000551176 KANK1Q14678 1352 aa11.65□□□□□ -0.55
ERBB3-218ENST00000551176 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
ERBB3-218ENST00000551176 NLRP1Q9C000 1473 aa11.64□□□□□ -0.55
ERBB3-218ENST00000551176 PTPRTO14522 1441 aa11.64□□□□□ -0.55
ERBB3-218ENST00000551176 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-218ENST00000551176 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
ERBB3-218ENST00000551176 EFCAB6Q5THR3 1501 aa11.62□□□□□ -0.55
ERBB3-218ENST00000551176 PKD2Q13563 968 aa11.61□□□□□ -0.55
ERBB3-218ENST00000551176 UNC13BO14795 1591 aa11.61□□□□□ -0.55
ERBB3-218ENST00000551176 UGGT1Q9NYU2 1555 aa11.61□□□□□ -0.55
ERBB3-218ENST00000551176 NOS1P29475 1434 aa11.6□□□□□ -0.55
ERBB3-218ENST00000551176 NAIPQ13075 1403 aa11.6□□□□□ -0.55
ERBB3-218ENST00000551176 SYNMO15061 1565 aa11.59□□□□□ -0.55
ERBB3-218ENST00000551176 THEMISQ8N1K5 641 aaPredicted RBP11.59□□□□□ -0.55
ERBB3-218ENST00000551176 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
ERBB3-218ENST00000551176 NUP155O75694 1391 aa11.58□□□□□ -0.56
ERBB3-218ENST00000551176 IDI1Q13907 227 aa11.58□□□□□ -0.56
ERBB3-218ENST00000551176 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
ERBB3-218ENST00000551176 ZNF335Q9H4Z2 1342 aaPredicted RBP11.57□□□□□ -0.56
ERBB3-218ENST00000551176 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
ERBB3-218ENST00000551176 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
ERBB3-218ENST00000551176 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
ERBB3-218ENST00000551176 ANKLE2Q86XL3 938 aa11.56□□□□□ -0.56
ERBB3-218ENST00000551176 IQGAP3Q86VI3 1631 aa11.56□□□□□ -0.56
ERBB3-218ENST00000551176 TET3O43151 1660 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 UBR1Q8IWV7 1749 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 LTKP29376 864 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 MED14O60244 1454 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 ARHGAP23Q9P227 1491 aa11.55□□□□□ -0.56
ERBB3-218ENST00000551176 NPHP4O75161 1426 aaPredicted RBP11.54□□□□□ -0.56
ERBB3-218ENST00000551176 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
ERBB3-218ENST00000551176 SLC52A1Q9NWF4 448 aa11.53□□□□□ -0.56
ERBB3-218ENST00000551176 SLIT1O75093 1534 aa11.53□□□□□ -0.56
ERBB3-218ENST00000551176 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
ERBB3-218ENST00000551176 E9PCH4 1651 aa11.52□□□□□ -0.56
ERBB3-218ENST00000551176 POLR1AO95602 1720 aaPredicted RBP11.52□□□□□ -0.57
ERBB3-218ENST00000551176 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
ERBB3-218ENST00000551176 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
ERBB3-218ENST00000551176 GCC2Q8IWJ2 1684 aa11.51□□□□□ -0.57
ERBB3-218ENST00000551176 CFAP65Q6ZU64 1925 aaKnown RBP11.5□□□□□ -0.57
ERBB3-218ENST00000551176 ADGRB3O60242 1522 aa11.5□□□□□ -0.57
ERBB3-218ENST00000551176 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
ERBB3-218ENST00000551176 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
ERBB3-218ENST00000551176 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
ERBB3-218ENST00000551176 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
ERBB3-218ENST00000551176 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
ERBB3-218ENST00000551176 ZFYVE9O95405 1425 aa11.47□□□□□ -0.57
ERBB3-218ENST00000551176 EID1Q9Y6B2 187 aa11.47□□□□□ -0.57
ERBB3-218ENST00000551176 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
ERBB3-218ENST00000551176 IQSEC2Q5JU85 1478 aa11.44□□□□□ -0.58
ERBB3-218ENST00000551176 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
ERBB3-218ENST00000551176 SLC26A8Q96RN1 970 aa11.44□□□□□ -0.58
ERBB3-218ENST00000551176 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
ERBB3-218ENST00000551176 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-218ENST00000551176 CPS1P31327 1500 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms