RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.38
PRPF40B-211ENST00000551063 ADGRL2O95490 1459 aa23.69■■□□□ 1.38
PRPF40B-211ENST00000551063 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
PRPF40B-211ENST00000551063 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
PRPF40B-211ENST00000551063 UHRF1BP1Q6BDS2 1440 aa23.67■■□□□ 1.38
PRPF40B-211ENST00000551063 ZMYM3Q14202 1370 aa23.67■■□□□ 1.38
PRPF40B-211ENST00000551063 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
PRPF40B-211ENST00000551063 SETD1BQ9UPS6 1966 aaKnown RBP23.66■■□□□ 1.38
PRPF40B-211ENST00000551063 C3P01024 1663 aa23.66■■□□□ 1.38
PRPF40B-211ENST00000551063 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
PRPF40B-211ENST00000551063 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
PRPF40B-211ENST00000551063 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
PRPF40B-211ENST00000551063 DMRT2Q9Y5R5 561 aa23.65■■□□□ 1.38
PRPF40B-211ENST00000551063 CHIC2Q9UKJ5 165 aa23.64■■□□□ 1.37
PRPF40B-211ENST00000551063 NPATQ14207 1427 aa23.64■■□□□ 1.37
PRPF40B-211ENST00000551063 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
PRPF40B-211ENST00000551063 CLTCQ00610 1675 aaKnown RBP23.63■■□□□ 1.37
PRPF40B-211ENST00000551063 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
PRPF40B-211ENST00000551063 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
PRPF40B-211ENST00000551063 ROCK1Q13464 1354 aa23.58■■□□□ 1.37
PRPF40B-211ENST00000551063 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
PRPF40B-211ENST00000551063 CERKQ8TCT0 537 aa23.57■■□□□ 1.36
PRPF40B-211ENST00000551063 PRDM15P57071 1507 aaPredicted RBP23.57■■□□□ 1.36
PRPF40B-211ENST00000551063 ABCC3O15438 1527 aa23.56■■□□□ 1.36
PRPF40B-211ENST00000551063 PZPP20742 1482 aa23.56■■□□□ 1.36
PRPF40B-211ENST00000551063 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
PRPF40B-211ENST00000551063 ANKRD50Q9ULJ7 1429 aa23.54■■□□□ 1.36
PRPF40B-211ENST00000551063 DEPDC5O75140 1603 aa23.52■■□□□ 1.36
PRPF40B-211ENST00000551063 KANK1Q14678 1352 aa23.5■■□□□ 1.35
PRPF40B-211ENST00000551063 STRCQ7RTU9 1775 aa23.5■■□□□ 1.35
PRPF40B-211ENST00000551063 ITGAEP38570 1179 aa23.48■■□□□ 1.35
PRPF40B-211ENST00000551063 PTPRTO14522 1441 aa23.48■■□□□ 1.35
PRPF40B-211ENST00000551063 TNRQ92752 1358 aa23.46■■□□□ 1.35
PRPF40B-211ENST00000551063 VWDEQ8N2E2 1590 aa23.45■■□□□ 1.34
PRPF40B-211ENST00000551063 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
PRPF40B-211ENST00000551063 ARHGAP31Q2M1Z3 1444 aa23.45■■□□□ 1.34
PRPF40B-211ENST00000551063 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
PRPF40B-211ENST00000551063 FBXO31Q5XUX0 539 aaPredicted RBP23.44■■□□□ 1.34
PRPF40B-211ENST00000551063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
PRPF40B-211ENST00000551063 CAMSAP1Q5T5Y3 1602 aa23.43■■□□□ 1.34
PRPF40B-211ENST00000551063 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
PRPF40B-211ENST00000551063 SPATA31D1Q6ZQQ2 1576 aa23.41■■□□□ 1.34
PRPF40B-211ENST00000551063 CEP170BQ9Y4F5 1589 aaPredicted RBP23.41■■□□□ 1.34
PRPF40B-211ENST00000551063 CEP152O94986 1710 aa23.41■■□□□ 1.34
PRPF40B-211ENST00000551063 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
PRPF40B-211ENST00000551063 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
PRPF40B-211ENST00000551063 NLRP1Q9C000 1473 aa23.39■■□□□ 1.34
PRPF40B-211ENST00000551063 UNC13BO14795 1591 aa23.38■■□□□ 1.33
PRPF40B-211ENST00000551063 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
PRPF40B-211ENST00000551063 PLA2R1Q13018 1463 aa23.35■■□□□ 1.33
PRPF40B-211ENST00000551063 PKD2Q13563 968 aa23.34■■□□□ 1.33
PRPF40B-211ENST00000551063 HFM1A2PYH4 1435 aa23.33■■□□□ 1.32
PRPF40B-211ENST00000551063 NAIPQ13075 1403 aa23.33■■□□□ 1.32
PRPF40B-211ENST00000551063 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
PRPF40B-211ENST00000551063 RPRD2Q5VT52 1461 aaKnown RBP23.31■■□□□ 1.32
PRPF40B-211ENST00000551063 TET3O43151 1660 aa23.28■■□□□ 1.32
PRPF40B-211ENST00000551063 NUP155O75694 1391 aa23.27■■□□□ 1.32
PRPF40B-211ENST00000551063 NOS1P29475 1434 aa23.27■■□□□ 1.32
PRPF40B-211ENST00000551063 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
PRPF40B-211ENST00000551063 GCC2Q8IWJ2 1684 aa23.27■■□□□ 1.32
PRPF40B-211ENST00000551063 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
PRPF40B-211ENST00000551063 LTBP4Q8N2S1 1624 aa23.26■■□□□ 1.31
PRPF40B-211ENST00000551063 THEMISQ8N1K5 641 aaPredicted RBP23.24■■□□□ 1.31
PRPF40B-211ENST00000551063 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
PRPF40B-211ENST00000551063 SYNMO15061 1565 aa23.2■■□□□ 1.3
PRPF40B-211ENST00000551063 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
PRPF40B-211ENST00000551063 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
PRPF40B-211ENST00000551063 IDI1Q13907 227 aa23.15■■□□□ 1.3
PRPF40B-211ENST00000551063 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
PRPF40B-211ENST00000551063 UBR1Q8IWV7 1749 aa23.15■■□□□ 1.3
PRPF40B-211ENST00000551063 CFAP65Q6ZU64 1925 aaKnown RBP23.15■■□□□ 1.3
PRPF40B-211ENST00000551063 E9PCH4 1651 aa23.14■■□□□ 1.29
PRPF40B-211ENST00000551063 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
PRPF40B-211ENST00000551063 PIK3C2BO00750 1634 aa23.13■■□□□ 1.29
PRPF40B-211ENST00000551063 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
PRPF40B-211ENST00000551063 SLIT1O75093 1534 aa23.13■■□□□ 1.29
PRPF40B-211ENST00000551063 KDM5AP29375 1690 aaKnown RBP23.12■■□□□ 1.29
PRPF40B-211ENST00000551063 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
PRPF40B-211ENST00000551063 MED14O60244 1454 aa23.11■■□□□ 1.29
PRPF40B-211ENST00000551063 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
PRPF40B-211ENST00000551063 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
PRPF40B-211ENST00000551063 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
PRPF40B-211ENST00000551063 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
PRPF40B-211ENST00000551063 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
PRPF40B-211ENST00000551063 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.29
PRPF40B-211ENST00000551063 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
PRPF40B-211ENST00000551063 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
PRPF40B-211ENST00000551063 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
PRPF40B-211ENST00000551063 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
PRPF40B-211ENST00000551063 TXNDC2Q86VQ3 553 aa23.03■■□□□ 1.28
PRPF40B-211ENST00000551063 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
PRPF40B-211ENST00000551063 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
PRPF40B-211ENST00000551063 LTKP29376 864 aa23.01■■□□□ 1.27
PRPF40B-211ENST00000551063 TRPM2O94759 1503 aa23.01■■□□□ 1.27
PRPF40B-211ENST00000551063 CPS1P31327 1500 aa23■■□□□ 1.27
PRPF40B-211ENST00000551063 IQGAP1P46940 1657 aa23■■□□□ 1.27
PRPF40B-211ENST00000551063 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
PRPF40B-211ENST00000551063 TMEM131LA2VDJ0 1609 aa22.99■■□□□ 1.27
PRPF40B-211ENST00000551063 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
PRPF40B-211ENST00000551063 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms