RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
PFDN5-211ENST00000550846 TNRQ92752 1358 aa12.8□□□□□ -0.36
PFDN5-211ENST00000550846 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
PFDN5-211ENST00000550846 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
PFDN5-211ENST00000550846 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
PFDN5-211ENST00000550846 WASHC2CQ9Y4E1 1318 aa12.79□□□□□ -0.36
PFDN5-211ENST00000550846 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
PFDN5-211ENST00000550846 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
PFDN5-211ENST00000550846 PIP4K2BP78356 416 aa12.76□□□□□ -0.37
PFDN5-211ENST00000550846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.76□□□□□ -0.37
PFDN5-211ENST00000550846 PZPP20742 1482 aa12.76□□□□□ -0.37
PFDN5-211ENST00000550846 SOCS7O14512 581 aa12.75□□□□□ -0.37
PFDN5-211ENST00000550846 NEURL4Q96JN8 1562 aa12.75□□□□□ -0.37
PFDN5-211ENST00000550846 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
PFDN5-211ENST00000550846 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
PFDN5-211ENST00000550846 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
PFDN5-211ENST00000550846 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-211ENST00000550846 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
PFDN5-211ENST00000550846 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
PFDN5-211ENST00000550846 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
PFDN5-211ENST00000550846 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
PFDN5-211ENST00000550846 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
PFDN5-211ENST00000550846 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
PFDN5-211ENST00000550846 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
PFDN5-211ENST00000550846 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
PFDN5-211ENST00000550846 HSPA1LP34931 641 aa12.7□□□□□ -0.38
PFDN5-211ENST00000550846 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
PFDN5-211ENST00000550846 ABCC3O15438 1527 aa12.69□□□□□ -0.38
PFDN5-211ENST00000550846 FAM135AQ9P2D6 1515 aa12.69□□□□□ -0.38
PFDN5-211ENST00000550846 THEMISQ8N1K5 641 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-211ENST00000550846 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-211ENST00000550846 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
PFDN5-211ENST00000550846 CPS1P31327 1500 aa12.67□□□□□ -0.38
PFDN5-211ENST00000550846 RNF17Q9BXT8 1623 aaKnown RBP12.67□□□□□ -0.38
PFDN5-211ENST00000550846 VWDEQ8N2E2 1590 aa12.67□□□□□ -0.38
PFDN5-211ENST00000550846 ERVK-7P63135 1459 aa12.66□□□□□ -0.38
PFDN5-211ENST00000550846 MYOM3Q5VTT5 1437 aa12.66□□□□□ -0.38
PFDN5-211ENST00000550846 TOM1O60784 492 aa12.66□□□□□ -0.38
PFDN5-211ENST00000550846 CEP152O94986 1710 aa12.65□□□□□ -0.38
PFDN5-211ENST00000550846 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
PFDN5-211ENST00000550846 MROH1Q8NDA8 1641 aa12.65□□□□□ -0.38
PFDN5-211ENST00000550846 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
PFDN5-211ENST00000550846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.397e-8■■□□□ 12.6
PFDN5-211ENST00000550846 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
PFDN5-211ENST00000550846 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
PFDN5-211ENST00000550846 KIF15Q9NS87 1388 aa12.63□□□□□ -0.39
PFDN5-211ENST00000550846 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
PFDN5-211ENST00000550846 DEPDC5O75140 1603 aa12.62□□□□□ -0.39
PFDN5-211ENST00000550846 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
PFDN5-211ENST00000550846 MED14O60244 1454 aa12.62□□□□□ -0.39
PFDN5-211ENST00000550846 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
PFDN5-211ENST00000550846 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
PFDN5-211ENST00000550846 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
PFDN5-211ENST00000550846 DUOX2Q9NRD8 1548 aa12.61□□□□□ -0.39
PFDN5-211ENST00000550846 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
PFDN5-211ENST00000550846 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
PFDN5-211ENST00000550846 LTKP29376 864 aa12.59□□□□□ -0.39
PFDN5-211ENST00000550846 ABCC5O15440 1437 aa12.59□□□□□ -0.39
PFDN5-211ENST00000550846 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
PFDN5-211ENST00000550846 SCAF11Q99590 1463 aaKnown RBP12.59□□□□□ -0.39
PFDN5-211ENST00000550846 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
PFDN5-211ENST00000550846 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
PFDN5-211ENST00000550846 APLP2Q06481 763 aa12.58□□□□□ -0.4
PFDN5-211ENST00000550846 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
PFDN5-211ENST00000550846 PHF23Q9BUL5 403 aaPredicted RBP12.58□□□□□ -0.4
PFDN5-211ENST00000550846 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
PFDN5-211ENST00000550846 PRDM15P57071 1507 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-211ENST00000550846 DAPK1P53355 1430 aa12.56□□□□□ -0.4
PFDN5-211ENST00000550846 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
PFDN5-211ENST00000550846 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
PFDN5-211ENST00000550846 SYNMO15061 1565 aa12.55□□□□□ -0.4
PFDN5-211ENST00000550846 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
PFDN5-211ENST00000550846 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
PFDN5-211ENST00000550846 EID1Q9Y6B2 187 aa12.54□□□□□ -0.4
PFDN5-211ENST00000550846 KANK1Q14678 1352 aa12.54□□□□□ -0.4
PFDN5-211ENST00000550846 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
PFDN5-211ENST00000550846 RBM33Q96EV2 1170 aaKnown RBP12.53□□□□□ -0.4
PFDN5-211ENST00000550846 ARHGAP31Q2M1Z3 1444 aa12.53□□□□□ -0.4
PFDN5-211ENST00000550846 SLIT1O75093 1534 aa12.52□□□□□ -0.4
PFDN5-211ENST00000550846 ANKRD30AQ9BXX3 1397 aa12.52□□□□□ -0.41
PFDN5-211ENST00000550846 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
PFDN5-211ENST00000550846 SLC26A8Q96RN1 970 aa12.51□□□□□ -0.41
PFDN5-211ENST00000550846 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
PFDN5-211ENST00000550846 IDI1Q13907 227 aa12.5□□□□□ -0.41
PFDN5-211ENST00000550846 BCANQ96GW7 911 aa12.5□□□□□ -0.41
PFDN5-211ENST00000550846 EFCAB6Q5THR3 1501 aa12.5□□□□□ -0.41
PFDN5-211ENST00000550846 TMEM94Q12767 1356 aa12.48□□□□□ -0.41
PFDN5-211ENST00000550846 XIRP1Q702N8 1843 aaKnown RBP12.48□□□□□ -0.41
PFDN5-211ENST00000550846 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-211ENST00000550846 ADGRB3O60242 1522 aa12.46□□□□□ -0.42
PFDN5-211ENST00000550846 LMTK2Q8IWU2 1503 aa12.46□□□□□ -0.42
PFDN5-211ENST00000550846 NOS1P29475 1434 aa12.44□□□□□ -0.42
PFDN5-211ENST00000550846 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-211ENST00000550846 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
PFDN5-211ENST00000550846 KCNA6P17658 529 aa12.43□□□□□ -0.42
PFDN5-211ENST00000550846 NUTM2DQ5VT03 806 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-211ENST00000550846 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-211ENST00000550846 ANKRD50Q9ULJ7 1429 aa12.43□□□□□ -0.42
PFDN5-211ENST00000550846 ADGRL2O95490 1459 aa12.42□□□□□ -0.42
PFDN5-211ENST00000550846 TET3O43151 1660 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms