RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 TSPY4P0CV99 314 aa32.81■■■□□ 2.84
CACNB3-218ENST00000550771 TSPY10P0CW01 314 aa32.81■■■□□ 2.84
CACNB3-218ENST00000550771 TCOF1Q13428 1488 aaKnown RBP32.8■■■□□ 2.84
CACNB3-218ENST00000550771 A2ML1A8K2U0 1454 aa32.77■■■□□ 2.84
CACNB3-218ENST00000550771 KDM5DQ9BY66 1539 aa32.77■■■□□ 2.84
CACNB3-218ENST00000550771 MAP3K1Q13233 1512 aa32.76■■■□□ 2.83
CACNB3-218ENST00000550771 WASHC2CQ9Y4E1 1318 aa32.75■■■□□ 2.83
CACNB3-218ENST00000550771 PZPP20742 1482 aa32.74■■■□□ 2.83
CACNB3-218ENST00000550771 TNRQ92752 1358 aa32.73■■■□□ 2.83
CACNB3-218ENST00000550771 FBXO31Q5XUX0 539 aaPredicted RBP32.72■■■□□ 2.83
CACNB3-218ENST00000550771 ZNF335Q9H4Z2 1342 aaPredicted RBP32.72■■■□□ 2.83
CACNB3-218ENST00000550771 KANK4Q5T7N3 995 aaPredicted RBP32.7■■■□□ 2.83
CACNB3-218ENST00000550771 DNMT1P26358 1616 aaKnown RBP32.69■■■□□ 2.82
CACNB3-218ENST00000550771 MIA2Q96PC5 1412 aa32.68■■■□□ 2.82
CACNB3-218ENST00000550771 MAST1Q9Y2H9 1570 aa32.66■■■□□ 2.82
CACNB3-218ENST00000550771 MYOM3Q5VTT5 1437 aa32.64■■■□□ 2.82
CACNB3-218ENST00000550771 NLRP1Q9C000 1473 aa32.6■■■□□ 2.81
CACNB3-218ENST00000550771 RNF17Q9BXT8 1623 aaKnown RBP32.59■■■□□ 2.81
CACNB3-218ENST00000550771 THEMISQ8N1K5 641 aaPredicted RBP32.57■■■□□ 2.8
CACNB3-218ENST00000550771 DISP3Q9P2K9 1392 aa32.55■■■□□ 2.8
CACNB3-218ENST00000550771 ANKLE2Q86XL3 938 aa32.54■■■□□ 2.8
CACNB3-218ENST00000550771 ABCC3O15438 1527 aa32.54■■■□□ 2.8
CACNB3-218ENST00000550771 EIF2AK4Q9P2K8 1649 aaKnown RBP32.54■■■□□ 2.8
CACNB3-218ENST00000550771 UBAP1LF5GYI3 381 aa32.52■■■□□ 2.8
CACNB3-218ENST00000550771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.52■■■□□ 2.8
CACNB3-218ENST00000550771 NEURL4Q96JN8 1562 aa32.52■■■□□ 2.8
CACNB3-218ENST00000550771 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
CACNB3-218ENST00000550771 UGGT1Q9NYU2 1555 aa32.5■■■□□ 2.79
CACNB3-218ENST00000550771 POLR1AO95602 1720 aaPredicted RBP32.5■■■□□ 2.79
CACNB3-218ENST00000550771 DUOX2Q9NRD8 1548 aa32.48■■■□□ 2.79
CACNB3-218ENST00000550771 APLP2Q06481 763 aa32.48■■■□□ 2.79
CACNB3-218ENST00000550771 SPATA31D1Q6ZQQ2 1576 aa32.47■■■□□ 2.79
CACNB3-218ENST00000550771 MROH1Q8NDA8 1641 aa32.45■■■□□ 2.79
CACNB3-218ENST00000550771 MED14O60244 1454 aa32.44■■■□□ 2.78
CACNB3-218ENST00000550771 SHANK2Q9UPX8 1470 aa32.44■■■□□ 2.78
CACNB3-218ENST00000550771 CPS1P31327 1500 aa32.44■■■□□ 2.78
CACNB3-218ENST00000550771 ABCC5O15440 1437 aa32.43■■■□□ 2.78
CACNB3-218ENST00000550771 ERVK-7P63135 1459 aa32.43■■■□□ 2.78
CACNB3-218ENST00000550771 KIF15Q9NS87 1388 aa32.42■■■□□ 2.78
CACNB3-218ENST00000550771 DEPDC5O75140 1603 aa32.41■■■□□ 2.78
CACNB3-218ENST00000550771 NPHP4O75161 1426 aaPredicted RBP32.41■■■□□ 2.78
CACNB3-218ENST00000550771 ERBINQ96RT1 1412 aa32.39■■■□□ 2.78
CACNB3-218ENST00000550771 PTPN23Q9H3S7 1636 aa32.37■■■□□ 2.77
CACNB3-218ENST00000550771 ILDR2Q71H61 639 aa32.37■■■□□ 2.77
CACNB3-218ENST00000550771 RRP7BPQ9NSQ0 103 aa32.36■■■□□ 2.77
CACNB3-218ENST00000550771 VWDEQ8N2E2 1590 aa32.35■■■□□ 2.77
CACNB3-218ENST00000550771 DAPK1P53355 1430 aa32.34■■■□□ 2.77
CACNB3-218ENST00000550771 ARHGAP31Q2M1Z3 1444 aa32.34■■■□□ 2.77
CACNB3-218ENST00000550771 PRDM15P57071 1507 aaPredicted RBP32.34■■■□□ 2.77
CACNB3-218ENST00000550771 FGD6Q6ZV73 1430 aa32.34■■■□□ 2.77
CACNB3-218ENST00000550771 CROCC2H7BZ55 1655 aa32.33■■■□□ 2.77
CACNB3-218ENST00000550771 CEP152O94986 1710 aa32.32■■■□□ 2.76
CACNB3-218ENST00000550771 TOM1O60784 492 aa32.32■■■□□ 2.76
CACNB3-218ENST00000550771 IQGAP1P46940 1657 aa32.29■■■□□ 2.76
CACNB3-218ENST00000550771 ANKRD30AQ9BXX3 1397 aa32.25■■■□□ 2.75
CACNB3-218ENST00000550771 SOCS7O14512 581 aa32.24■■■□□ 2.75
CACNB3-218ENST00000550771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.24■■■□□ 2.75
CACNB3-218ENST00000550771 UBR1Q8IWV7 1749 aa32.23■■■□□ 2.75
CACNB3-218ENST00000550771 KANK1Q14678 1352 aa32.23■■■□□ 2.75
CACNB3-218ENST00000550771 PIP4K2BP78356 416 aa32.23■■■□□ 2.75
CACNB3-218ENST00000550771 SCAF1Q9H7N4 1312 aaKnown RBP32.22■■■□□ 2.75
CACNB3-218ENST00000550771 SCAF11Q99590 1463 aaKnown RBP32.22■■■□□ 2.75
CACNB3-218ENST00000550771 ARHGAP23Q9P227 1491 aa32.21■■■□□ 2.75
CACNB3-218ENST00000550771 SLIT1O75093 1534 aa32.2■■■□□ 2.74
CACNB3-218ENST00000550771 CFAP65Q6ZU64 1925 aaKnown RBP32.2■■■□□ 2.74
CACNB3-218ENST00000550771 HSPA1LP34931 641 aa32.19■■■□□ 2.74
CACNB3-218ENST00000550771 CHIC2Q9UKJ5 165 aa32.19■■■□□ 2.74
CACNB3-218ENST00000550771 TXNDC2Q86VQ3 553 aa32.18■■■□□ 2.74
CACNB3-218ENST00000550771 LTKP29376 864 aa32.17■■■□□ 2.74
CACNB3-218ENST00000550771 LMTK2Q8IWU2 1503 aa32.16■■■□□ 2.74
CACNB3-218ENST00000550771 LRRC7Q96NW7 1537 aa32.15■■■□□ 2.74
CACNB3-218ENST00000550771 EID1Q9Y6B2 187 aa32.14■■■□□ 2.74
CACNB3-218ENST00000550771 ADGRL2O95490 1459 aa32.11■■■□□ 2.73
CACNB3-218ENST00000550771 SYNMO15061 1565 aa32.11■■■□□ 2.73
CACNB3-218ENST00000550771 TMEM2Q9UHN6 1383 aa32.1■■■□□ 2.73
CACNB3-218ENST00000550771 STRCP1A6NGW2 1772 aa32.1■■■□□ 2.73
CACNB3-218ENST00000550771 ALKQ9UM73 1620 aa32.1■■■□□ 2.73
CACNB3-218ENST00000550771 STAG3Q9UJ98 1225 aa32.09■■■□□ 2.73
CACNB3-218ENST00000550771 PIK3C2BO00750 1634 aa32.08■■■□□ 2.73
CACNB3-218ENST00000550771 IDI1Q13907 227 aa32.07■■■□□ 2.72
CACNB3-218ENST00000550771 FAM50AQ14320 339 aaKnown RBP32.06■■■□□ 2.72
CACNB3-218ENST00000550771 NOS1P29475 1434 aa32.04■■■□□ 2.72
CACNB3-218ENST00000550771 KDM5AP29375 1690 aaKnown RBP32.04■■■□□ 2.72
CACNB3-218ENST00000550771 EFCAB6Q5THR3 1501 aa32.03■■■□□ 2.72
CACNB3-218ENST00000550771 ANKRD50Q9ULJ7 1429 aa32.01■■■□□ 2.72
CACNB3-218ENST00000550771 SLC52A1Q9NWF4 448 aa32■■■□□ 2.71
CACNB3-218ENST00000550771 MED1Q15648 1581 aaPredicted RBP31.97■■■□□ 2.71
CACNB3-218ENST00000550771 RPRD2Q5VT52 1461 aaKnown RBP31.96■■■□□ 2.71
CACNB3-218ENST00000550771 ADGRB3O60242 1522 aa31.92■■■□□ 2.7
CACNB3-218ENST00000550771 KCNA6P17658 529 aa31.89■■■□□ 2.7
CACNB3-218ENST00000550771 TET3O43151 1660 aa31.89■■■□□ 2.7
CACNB3-218ENST00000550771 SLC26A8Q96RN1 970 aa31.86■■■□□ 2.69
CACNB3-218ENST00000550771 TMEM94Q12767 1356 aa31.83■■■□□ 2.69
CACNB3-218ENST00000550771 ROCK1Q13464 1354 aa31.83■■■□□ 2.69
CACNB3-218ENST00000550771 XIRP1Q702N8 1843 aaKnown RBP31.83■■■□□ 2.69
CACNB3-218ENST00000550771 SENP3Q9H4L4 574 aaPredicted RBP31.81■■■□□ 2.68
CACNB3-218ENST00000550771 UNC13BO14795 1591 aa31.79■■■□□ 2.68
CACNB3-218ENST00000550771 ZFYVE9O95405 1425 aa31.79■■■□□ 2.68
CACNB3-218ENST00000550771 HDGFP51858 240 aaKnown RBP31.79■■■□□ 2.68
CACNB3-218ENST00000550771 FAM135BQ49AJ0 1406 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms