RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TSPY4P0CV99 314 aa34.47■■■■□ 3.11
SMARCC2-210ENST00000550519 TSPY10P0CW01 314 aa34.47■■■■□ 3.11
SMARCC2-210ENST00000550519 FAM135AQ9P2D6 1515 aa34.45■■■■□ 3.11
SMARCC2-210ENST00000550519 A2ML1A8K2U0 1454 aa34.45■■■■□ 3.1
SMARCC2-210ENST00000550519 FBXO31Q5XUX0 539 aaPredicted RBP34.43■■■■□ 3.1
SMARCC2-210ENST00000550519 KDM5DQ9BY66 1539 aa34.43■■■■□ 3.1
SMARCC2-210ENST00000550519 ZNF335Q9H4Z2 1342 aaPredicted RBP34.42■■■■□ 3.1
SMARCC2-210ENST00000550519 PZPP20742 1482 aa34.41■■■■□ 3.1
SMARCC2-210ENST00000550519 WASHC2CQ9Y4E1 1318 aa34.41■■■■□ 3.1
SMARCC2-210ENST00000550519 KANK4Q5T7N3 995 aaPredicted RBP34.41■■■■□ 3.1
SMARCC2-210ENST00000550519 MAP3K1Q13233 1512 aa34.4■■■■□ 3.1
SMARCC2-210ENST00000550519 TNRQ92752 1358 aa34.39■■■■□ 3.1
SMARCC2-210ENST00000550519 DNMT1P26358 1616 aaKnown RBP34.38■■■■□ 3.09
SMARCC2-210ENST00000550519 MIA2Q96PC5 1412 aa34.33■■■■□ 3.09
SMARCC2-210ENST00000550519 MAST1Q9Y2H9 1570 aa34.32■■■■□ 3.09
SMARCC2-210ENST00000550519 MYOM3Q5VTT5 1437 aa34.31■■■■□ 3.08
SMARCC2-210ENST00000550519 RNF17Q9BXT8 1623 aaKnown RBP34.24■■■■□ 3.07
SMARCC2-210ENST00000550519 NLRP1Q9C000 1473 aa34.24■■■■□ 3.07
SMARCC2-210ENST00000550519 DISP3Q9P2K9 1392 aa34.22■■■■□ 3.07
SMARCC2-210ENST00000550519 THEMISQ8N1K5 641 aaPredicted RBP34.21■■■■□ 3.07
SMARCC2-210ENST00000550519 ABCC3O15438 1527 aa34.2■■■■□ 3.07
SMARCC2-210ENST00000550519 NEURL4Q96JN8 1562 aa34.2■■■■□ 3.07
SMARCC2-210ENST00000550519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.2■■■■□ 3.07
SMARCC2-210ENST00000550519 UBAP1LF5GYI3 381 aa34.19■■■■□ 3.06
SMARCC2-210ENST00000550519 ANKLE2Q86XL3 938 aa34.19■■■■□ 3.06
SMARCC2-210ENST00000550519 EIF2AK4Q9P2K8 1649 aaKnown RBP34.19■■■■□ 3.06
SMARCC2-210ENST00000550519 UGGT1Q9NYU2 1555 aa34.16■■■■□ 3.06
SMARCC2-210ENST00000550519 POLR1AO95602 1720 aaPredicted RBP34.16■■■■□ 3.06
SMARCC2-210ENST00000550519 ZC3H13Q5T200 1668 aaKnown RBP34.14■■■■□ 3.06
SMARCC2-210ENST00000550519 MROH1Q8NDA8 1641 aa34.13■■■■□ 3.05
SMARCC2-210ENST00000550519 SPATA31D1Q6ZQQ2 1576 aa34.13■■■■□ 3.05
SMARCC2-210ENST00000550519 DUOX2Q9NRD8 1548 aa34.13■■■■□ 3.05
SMARCC2-210ENST00000550519 MED14O60244 1454 aa34.1■■■■□ 3.05
SMARCC2-210ENST00000550519 ERVK-7P63135 1459 aa34.09■■■■□ 3.05
SMARCC2-210ENST00000550519 SHANK2Q9UPX8 1470 aa34.09■■■■□ 3.05
SMARCC2-210ENST00000550519 APLP2Q06481 763 aa34.09■■■■□ 3.05
SMARCC2-210ENST00000550519 ABCC5O15440 1437 aa34.09■■■■□ 3.05
SMARCC2-210ENST00000550519 ILDR2Q71H61 639 aa34.08■■■■□ 3.05
SMARCC2-210ENST00000550519 CPS1P31327 1500 aa34.08■■■■□ 3.05
SMARCC2-210ENST00000550519 KIF15Q9NS87 1388 aa34.07■■■■□ 3.04
SMARCC2-210ENST00000550519 NPHP4O75161 1426 aaPredicted RBP34.06■■■■□ 3.04
SMARCC2-210ENST00000550519 DEPDC5O75140 1603 aa34.06■■■■□ 3.04
SMARCC2-210ENST00000550519 PTPN23Q9H3S7 1636 aa34.03■■■■□ 3.04
SMARCC2-210ENST00000550519 RRP7BPQ9NSQ0 103 aa34.02■■■■□ 3.04
SMARCC2-210ENST00000550519 ERBINQ96RT1 1412 aa34.02■■■■□ 3.04
SMARCC2-210ENST00000550519 VWDEQ8N2E2 1590 aa34.02■■■■□ 3.04
SMARCC2-210ENST00000550519 CEP152O94986 1710 aa33.99■■■■□ 3.03
SMARCC2-210ENST00000550519 DAPK1P53355 1430 aa33.99■■■■□ 3.03
SMARCC2-210ENST00000550519 FGD6Q6ZV73 1430 aa33.99■■■■□ 3.03
SMARCC2-210ENST00000550519 PRDM15P57071 1507 aaPredicted RBP33.99■■■■□ 3.03
SMARCC2-210ENST00000550519 ARHGAP31Q2M1Z3 1444 aa33.98■■■■□ 3.03
SMARCC2-210ENST00000550519 CROCC2H7BZ55 1655 aa33.98■■■■□ 3.03
SMARCC2-210ENST00000550519 TOM1O60784 492 aa33.95■■■■□ 3.03
SMARCC2-210ENST00000550519 IQGAP1P46940 1657 aa33.93■■■■□ 3.02
SMARCC2-210ENST00000550519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.9■■■■□ 3.023e-7■■■■□ 23.4
SMARCC2-210ENST00000550519 SOCS7O14512 581 aa33.89■■■■□ 3.02
SMARCC2-210ENST00000550519 PIP4K2BP78356 416 aa33.89■■■■□ 3.02
SMARCC2-210ENST00000550519 UBR1Q8IWV7 1749 aa33.89■■■■□ 3.02
SMARCC2-210ENST00000550519 CFAP65Q6ZU64 1925 aaKnown RBP33.88■■■■□ 3.01
SMARCC2-210ENST00000550519 ANKRD30AQ9BXX3 1397 aa33.87■■■■□ 3.01
SMARCC2-210ENST00000550519 SCAF1Q9H7N4 1312 aaKnown RBP33.87■■■■□ 3.01
SMARCC2-210ENST00000550519 CHIC2Q9UKJ5 165 aa33.87■■■■□ 3.01
SMARCC2-210ENST00000550519 ARHGAP23Q9P227 1491 aa33.86■■■■□ 3.01
SMARCC2-210ENST00000550519 KANK1Q14678 1352 aa33.85■■■■□ 3.01
SMARCC2-210ENST00000550519 SCAF11Q99590 1463 aaKnown RBP33.85■■■■□ 3.01
SMARCC2-210ENST00000550519 HSPA1LP34931 641 aa33.85■■■■□ 3.01
SMARCC2-210ENST00000550519 LTKP29376 864 aa33.84■■■■□ 3.01
SMARCC2-210ENST00000550519 SLIT1O75093 1534 aa33.84■■■■□ 3.01
SMARCC2-210ENST00000550519 TXNDC2Q86VQ3 553 aa33.81■■■■□ 3
SMARCC2-210ENST00000550519 LMTK2Q8IWU2 1503 aa33.8■■■■□ 3
SMARCC2-210ENST00000550519 LRRC7Q96NW7 1537 aa33.8■■■■□ 3
SMARCC2-210ENST00000550519 STRCP1A6NGW2 1772 aa33.79■■■■□ 3
SMARCC2-210ENST00000550519 ALKQ9UM73 1620 aa33.79■■■■□ 3
SMARCC2-210ENST00000550519 ADGRL2O95490 1459 aa33.76■■■□□ 2.99
SMARCC2-210ENST00000550519 EID1Q9Y6B2 187 aa33.75■■■□□ 2.99
SMARCC2-210ENST00000550519 TMEM2Q9UHN6 1383 aa33.74■■■□□ 2.99
SMARCC2-210ENST00000550519 PIK3C2BO00750 1634 aa33.73■■■□□ 2.99
SMARCC2-210ENST00000550519 SYNMO15061 1565 aa33.72■■■□□ 2.99
SMARCC2-210ENST00000550519 IDI1Q13907 227 aa33.72■■■□□ 2.99
SMARCC2-210ENST00000550519 STAG3Q9UJ98 1225 aa33.7■■■□□ 2.99
SMARCC2-210ENST00000550519 FAM50AQ14320 339 aaKnown RBP33.69■■■□□ 2.98
SMARCC2-210ENST00000550519 NOS1P29475 1434 aa33.69■■■□□ 2.98
SMARCC2-210ENST00000550519 EFCAB6Q5THR3 1501 aa33.66■■■□□ 2.98
SMARCC2-210ENST00000550519 KDM5AP29375 1690 aaKnown RBP33.65■■■□□ 2.98
SMARCC2-210ENST00000550519 ANKRD50Q9ULJ7 1429 aa33.63■■■□□ 2.97
SMARCC2-210ENST00000550519 MED1Q15648 1581 aaPredicted RBP33.61■■■□□ 2.97
SMARCC2-210ENST00000550519 SLC52A1Q9NWF4 448 aa33.6■■■□□ 2.97
SMARCC2-210ENST00000550519 RPRD2Q5VT52 1461 aaKnown RBP33.56■■■□□ 2.96
SMARCC2-210ENST00000550519 ADGRB3O60242 1522 aa33.54■■■□□ 2.96
SMARCC2-210ENST00000550519 TET3O43151 1660 aa33.54■■■□□ 2.96
SMARCC2-210ENST00000550519 KCNA6P17658 529 aa33.52■■■□□ 2.96
SMARCC2-210ENST00000550519 SLC26A8Q96RN1 970 aa33.51■■■□□ 2.95
SMARCC2-210ENST00000550519 XIRP1Q702N8 1843 aaKnown RBP33.49■■■□□ 2.95
SMARCC2-210ENST00000550519 SENP3Q9H4L4 574 aaPredicted RBP33.48■■■□□ 2.95
SMARCC2-210ENST00000550519 TMEM94Q12767 1356 aa33.47■■■□□ 2.95
SMARCC2-210ENST00000550519 ROCK1Q13464 1354 aa33.44■■■□□ 2.94
SMARCC2-210ENST00000550519 ZFYVE9O95405 1425 aa33.42■■■□□ 2.94
SMARCC2-210ENST00000550519 UNC13BO14795 1591 aa33.42■■■□□ 2.94
SMARCC2-210ENST00000550519 PROSER2Q86WR7 435 aaPredicted RBP33.41■■■□□ 2.94
SMARCC2-210ENST00000550519 FAM135BQ49AJ0 1406 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms