RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.65
CBX5-204ENST00000550411 NPATQ14207 1427 aa11.01□□□□□ -0.65
CBX5-204ENST00000550411 A2MP01023 1474 aa11.01□□□□□ -0.65
CBX5-204ENST00000550411 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
CBX5-204ENST00000550411 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
CBX5-204ENST00000550411 DNMT1P26358 1616 aaKnown RBP11.01□□□□□ -0.65
CBX5-204ENST00000550411 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
CBX5-204ENST00000550411 MAP3K1Q13233 1512 aa11□□□□□ -0.65
CBX5-204ENST00000550411 ZMYM3Q14202 1370 aa11□□□□□ -0.65
CBX5-204ENST00000550411 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
CBX5-204ENST00000550411 NCOA2Q15596 1464 aa11□□□□□ -0.65
CBX5-204ENST00000550411 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
CBX5-204ENST00000550411 CEP152O94986 1710 aa10.99□□□□□ -0.65
CBX5-204ENST00000550411 CFDP1Q9UEE9 299 aaPredicted RBP10.98□□□□□ -0.65
CBX5-204ENST00000550411 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
CBX5-204ENST00000550411 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
CBX5-204ENST00000550411 MBD5Q9P267 1494 aa10.96□□□□□ -0.65
CBX5-204ENST00000550411 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
CBX5-204ENST00000550411 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
CBX5-204ENST00000550411 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
CBX5-204ENST00000550411 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
CBX5-204ENST00000550411 GGT6Q6P531 493 aa10.94□□□□□ -0.66
CBX5-204ENST00000550411 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
CBX5-204ENST00000550411 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
CBX5-204ENST00000550411 TCOF1Q13428 1488 aaKnown RBP10.93□□□□□ -0.66
CBX5-204ENST00000550411 RTEL1-TNFRSF6BF6WH68 1400 aa10.93□□□□□ -0.66
CBX5-204ENST00000550411 ZNF644Q9H582 1327 aaPredicted RBP10.93□□□□□ -0.66
CBX5-204ENST00000550411 CROCC2H7BZ55 1655 aa10.93□□□□□ -0.66
CBX5-204ENST00000550411 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
CBX5-204ENST00000550411 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
CBX5-204ENST00000550411 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
CBX5-204ENST00000550411 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
CBX5-204ENST00000550411 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
CBX5-204ENST00000550411 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
CBX5-204ENST00000550411 IQGAP1P46940 1657 aa10.92□□□□□ -0.66
CBX5-204ENST00000550411 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
CBX5-204ENST00000550411 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
CBX5-204ENST00000550411 CCDC141Q6ZP82 1450 aa10.92□□□□□ -0.66
CBX5-204ENST00000550411 UBR1Q8IWV7 1749 aa10.91□□□□□ -0.66
CBX5-204ENST00000550411 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
CBX5-204ENST00000550411 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
CBX5-204ENST00000550411 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
CBX5-204ENST00000550411 PKD2Q13563 968 aa10.9□□□□□ -0.66
CBX5-204ENST00000550411 ZNF335Q9H4Z2 1342 aaPredicted RBP10.89□□□□□ -0.67
CBX5-204ENST00000550411 MYO5BQ9ULV0 1848 aa10.89□□□□□ -0.67
CBX5-204ENST00000550411 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CBX5-204ENST00000550411 ILDR2Q71H61 639 aa10.89□□□□□ -0.67
CBX5-204ENST00000550411 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
CBX5-204ENST00000550411 PZPP20742 1482 aa10.88□□□□□ -0.67
CBX5-204ENST00000550411 MYOM3Q5VTT5 1437 aa10.88□□□□□ -0.67
CBX5-204ENST00000550411 FKBP8Q14318 412 aa10.87□□□□□ -0.67
CBX5-204ENST00000550411 UGGT1Q9NYU2 1555 aa10.86□□□□□ -0.67
CBX5-204ENST00000550411 CPS1P31327 1500 aa10.86□□□□□ -0.67
CBX5-204ENST00000550411 MROH1Q8NDA8 1641 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 UBAP1LF5GYI3 381 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 SOCS7O14512 581 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 KIF3BO15066 747 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 VWDEQ8N2E2 1590 aa10.85□□□□□ -0.67
CBX5-204ENST00000550411 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
CBX5-204ENST00000550411 TNRQ92752 1358 aa10.84□□□□□ -0.67
CBX5-204ENST00000550411 SYNMO15061 1565 aa10.84□□□□□ -0.67
CBX5-204ENST00000550411 NLRP1Q9C000 1473 aa10.83□□□□□ -0.68
CBX5-204ENST00000550411 FGD6Q6ZV73 1430 aa10.83□□□□□ -0.68
CBX5-204ENST00000550411 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
CBX5-204ENST00000550411 SHANK2Q9UPX8 1470 aa10.82□□□□□ -0.68
CBX5-204ENST00000550411 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
CBX5-204ENST00000550411 ABCC3O15438 1527 aa10.82□□□□□ -0.68
CBX5-204ENST00000550411 WASHC2CQ9Y4E1 1318 aa10.82□□□□□ -0.68
CBX5-204ENST00000550411 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
CBX5-204ENST00000550411 MED14O60244 1454 aa10.81□□□□□ -0.68
CBX5-204ENST00000550411 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
CBX5-204ENST00000550411 ALKQ9UM73 1620 aa10.8□□□□□ -0.68
CBX5-204ENST00000550411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
CBX5-204ENST00000550411 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
CBX5-204ENST00000550411 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
CBX5-204ENST00000550411 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
CBX5-204ENST00000550411 ABCC5O15440 1437 aa10.78□□□□□ -0.68
CBX5-204ENST00000550411 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
CBX5-204ENST00000550411 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
CBX5-204ENST00000550411 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
CBX5-204ENST00000550411 PRDM15P57071 1507 aaPredicted RBP10.78□□□□□ -0.68
CBX5-204ENST00000550411 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.68
CBX5-204ENST00000550411 ERVK-7P63135 1459 aa10.77□□□□□ -0.69
CBX5-204ENST00000550411 DAPK1P53355 1430 aa10.76□□□□□ -0.69
CBX5-204ENST00000550411 TOM1O60784 492 aa10.76□□□□□ -0.69
CBX5-204ENST00000550411 GCC2Q8IWJ2 1684 aa10.76□□□□□ -0.69
CBX5-204ENST00000550411 PIP4K2BP78356 416 aa10.75□□□□□ -0.69
CBX5-204ENST00000550411 LRRC7Q96NW7 1537 aa10.74□□□□□ -0.69
CBX5-204ENST00000550411 HSPA1LP34931 641 aa10.73□□□□□ -0.69
CBX5-204ENST00000550411 APLP2Q06481 763 aa10.73□□□□□ -0.69
CBX5-204ENST00000550411 ADGRL2O95490 1459 aa10.73□□□□□ -0.69
CBX5-204ENST00000550411 SLIT1O75093 1534 aa10.73□□□□□ -0.69
CBX5-204ENST00000550411 SCAF11Q99590 1463 aaKnown RBP10.71□□□□□ -0.69
CBX5-204ENST00000550411 KIF15Q9NS87 1388 aa10.71□□□□□ -0.69
CBX5-204ENST00000550411 ARHGAP23Q9P227 1491 aa10.71□□□□□ -0.69
CBX5-204ENST00000550411 SETD1AO15047 1707 aaKnown RBP10.7□□□□□ -0.7
CBX5-204ENST00000550411 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
CBX5-204ENST00000550411 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms