RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 RNF17Q9BXT8 1623 aaKnown RBP11.45□□□□□ -0.58
RNF41-208ENST00000550379 UNC13BO14795 1591 aa11.45□□□□□ -0.58
RNF41-208ENST00000550379 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
RNF41-208ENST00000550379 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
RNF41-208ENST00000550379 PRDM15P57071 1507 aaPredicted RBP11.43□□□□□ -0.58
RNF41-208ENST00000550379 LMTK2Q8IWU2 1503 aa11.42□□□□□ -0.58
RNF41-208ENST00000550379 IQGAP3Q86VI3 1631 aa11.4□□□□□ -0.58
RNF41-208ENST00000550379 MROH1Q8NDA8 1641 aa11.4□□□□□ -0.58
RNF41-208ENST00000550379 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.59
RNF41-208ENST00000550379 PZPP20742 1482 aa11.38□□□□□ -0.59
RNF41-208ENST00000550379 ARHGAP31Q2M1Z3 1444 aa11.38□□□□□ -0.59
RNF41-208ENST00000550379 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
RNF41-208ENST00000550379 ZC3H13Q5T200 1668 aaKnown RBP11.36□□□□□ -0.59
RNF41-208ENST00000550379 KIF3BO15066 747 aa11.36□□□□□ -0.59
RNF41-208ENST00000550379 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
RNF41-208ENST00000550379 NUP155O75694 1391 aa11.36□□□□□ -0.59
RNF41-208ENST00000550379 KANK1Q14678 1352 aa11.36□□□□□ -0.59
RNF41-208ENST00000550379 TET3O43151 1660 aa11.35□□□□□ -0.59
RNF41-208ENST00000550379 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
RNF41-208ENST00000550379 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
RNF41-208ENST00000550379 PTPRTO14522 1441 aa11.33□□□□□ -0.6
RNF41-208ENST00000550379 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
RNF41-208ENST00000550379 ABCC3O15438 1527 aa11.32□□□□□ -0.6
RNF41-208ENST00000550379 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
RNF41-208ENST00000550379 SIGLEC1Q9BZZ2 1709 aa11.32□□□□□ -0.6
RNF41-208ENST00000550379 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
RNF41-208ENST00000550379 NEURL4Q96JN8 1562 aa11.31□□□□□ -0.6
RNF41-208ENST00000550379 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
RNF41-208ENST00000550379 MROH2AA6NES4 1674 aa11.3□□□□□ -0.6
RNF41-208ENST00000550379 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
RNF41-208ENST00000550379 NOS1P29475 1434 aa11.28□□□□□ -0.6
RNF41-208ENST00000550379 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
RNF41-208ENST00000550379 NPATQ14207 1427 aa11.27□□□□□ -0.6
RNF41-208ENST00000550379 PLA2R1Q13018 1463 aa11.27□□□□□ -0.6
RNF41-208ENST00000550379 PKD2Q13563 968 aa11.27□□□□□ -0.61
RNF41-208ENST00000550379 E9PCH4 1651 aa11.27□□□□□ -0.61
RNF41-208ENST00000550379 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
RNF41-208ENST00000550379 GGT6Q6P531 493 aa11.26□□□□□ -0.61
RNF41-208ENST00000550379 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
RNF41-208ENST00000550379 CAMSAP1Q5T5Y3 1602 aa11.26□□□□□ -0.61
RNF41-208ENST00000550379 ADAMTSL3P82987 1691 aa11.26□□□□□ -0.61
RNF41-208ENST00000550379 TRPM2O94759 1503 aa11.25□□□□□ -0.61
RNF41-208ENST00000550379 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
RNF41-208ENST00000550379 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
RNF41-208ENST00000550379 SPATA31D1Q6ZQQ2 1576 aa11.24□□□□□ -0.61
RNF41-208ENST00000550379 CEP152O94986 1710 aa11.23□□□□□ -0.61
RNF41-208ENST00000550379 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
RNF41-208ENST00000550379 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
RNF41-208ENST00000550379 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
RNF41-208ENST00000550379 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
RNF41-208ENST00000550379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNF41-208ENST00000550379 KDM5AP29375 1690 aaKnown RBP11.21□□□□□ -0.61
RNF41-208ENST00000550379 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
RNF41-208ENST00000550379 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
RNF41-208ENST00000550379 SPATA31E1Q6ZUB1 1445 aa11.19□□□□□ -0.62
RNF41-208ENST00000550379 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
RNF41-208ENST00000550379 CLTCQ00610 1675 aaKnown RBP11.19□□□□□ -0.62
RNF41-208ENST00000550379 PREX1Q8TCU6 1659 aa11.19□□□□□ -0.62
RNF41-208ENST00000550379 FER1L4A9Z1Z3 1794 aa11.18□□□□□ -0.62
RNF41-208ENST00000550379 ESF1Q9H501 851 aaKnown RBP11.17□□□□□ -0.62
RNF41-208ENST00000550379 NLRP1Q9C000 1473 aa11.17□□□□□ -0.62
RNF41-208ENST00000550379 SYNMO15061 1565 aa11.16□□□□□ -0.62
RNF41-208ENST00000550379 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
RNF41-208ENST00000550379 C3P01024 1663 aa11.15□□□□□ -0.62
RNF41-208ENST00000550379 ZFYVE9O95405 1425 aa11.15□□□□□ -0.62
RNF41-208ENST00000550379 CLTCL1P53675 1640 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 MADDQ8WXG6 1647 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 FOXD1Q16676 465 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 KIF1BO60333 1816 aa11.14□□□□□ -0.63
RNF41-208ENST00000550379 IDI1Q13907 227 aa11.13□□□□□ -0.63
RNF41-208ENST00000550379 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
RNF41-208ENST00000550379 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
RNF41-208ENST00000550379 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
RNF41-208ENST00000550379 MLECQ14165 292 aa11.12□□□□□ -0.63
RNF41-208ENST00000550379 TNRQ92752 1358 aa11.12□□□□□ -0.63
RNF41-208ENST00000550379 PTPRMP28827 1452 aa11.12□□□□□ -0.63
RNF41-208ENST00000550379 TMEM131LA2VDJ0 1609 aa11.11□□□□□ -0.63
RNF41-208ENST00000550379 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
RNF41-208ENST00000550379 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
RNF41-208ENST00000550379 MYOM2P54296 1465 aa11.1□□□□□ -0.63
RNF41-208ENST00000550379 NRXN1Q9ULB1 1477 aa11.1□□□□□ -0.63
RNF41-208ENST00000550379 RIMS1Q86UR5 1692 aaKnown RBP11.09□□□□□ -0.63
RNF41-208ENST00000550379 L3MBTL2Q969R5 705 aa11.09□□□□□ -0.63
RNF41-208ENST00000550379 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
RNF41-208ENST00000550379 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
RNF41-208ENST00000550379 IFT172Q9UG01 1749 aa11.08□□□□□ -0.64
RNF41-208ENST00000550379 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
RNF41-208ENST00000550379 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
RNF41-208ENST00000550379 SLIT1O75093 1534 aa11.07□□□□□ -0.64
RNF41-208ENST00000550379 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
RNF41-208ENST00000550379 UGGT1Q9NYU2 1555 aa11.06□□□□□ -0.64
RNF41-208ENST00000550379 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
RNF41-208ENST00000550379 PPLO60437 1756 aa11.05□□□□□ -0.64
RNF41-208ENST00000550379 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
RNF41-208ENST00000550379 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
RNF41-208ENST00000550379 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNF41-208ENST00000550379 KIAA1210Q9ULL0 1709 aa11.05□□□□□ -0.64
RNF41-208ENST00000550379 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms