RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 KDM4FA0A1W2PPD8 638 aa19.45■□□□□ 0.7
TROAP-212ENST00000550346 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
TROAP-212ENST00000550346 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
TROAP-212ENST00000550346 NAIPQ13075 1403 aa19.43■□□□□ 0.7
TROAP-212ENST00000550346 SIGLEC1Q9BZZ2 1709 aa19.43■□□□□ 0.7
TROAP-212ENST00000550346 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
TROAP-212ENST00000550346 EIF2AK4Q9P2K8 1649 aaKnown RBP19.43■□□□□ 0.7
TROAP-212ENST00000550346 HFM1A2PYH4 1435 aa19.42■□□□□ 0.7
TROAP-212ENST00000550346 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
TROAP-212ENST00000550346 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
TROAP-212ENST00000550346 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
TROAP-212ENST00000550346 NUP155O75694 1391 aa19.37■□□□□ 0.69
TROAP-212ENST00000550346 FER1L4A9Z1Z3 1794 aa19.37■□□□□ 0.69
TROAP-212ENST00000550346 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
TROAP-212ENST00000550346 ZMYM3Q14202 1370 aa19.35■□□□□ 0.69
TROAP-212ENST00000550346 MADDQ8WXG6 1647 aa19.35■□□□□ 0.69
TROAP-212ENST00000550346 RNF17Q9BXT8 1623 aaKnown RBP19.34■□□□□ 0.69
TROAP-212ENST00000550346 HRCP23327 699 aa19.34■□□□□ 0.69
TROAP-212ENST00000550346 CEBPAP49715 358 aaPredicted RBP19.34■□□□□ 0.69
TROAP-212ENST00000550346 RIMS1Q86UR5 1692 aaKnown RBP19.33■□□□□ 0.68
TROAP-212ENST00000550346 FAM135AQ9P2D6 1515 aa19.31■□□□□ 0.68
TROAP-212ENST00000550346 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
TROAP-212ENST00000550346 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
TROAP-212ENST00000550346 PTPRMP28827 1452 aa19.3■□□□□ 0.68
TROAP-212ENST00000550346 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
TROAP-212ENST00000550346 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
TROAP-212ENST00000550346 PRDM15P57071 1507 aaPredicted RBP19.27■□□□□ 0.68
TROAP-212ENST00000550346 ABCC3O15438 1527 aa19.26■□□□□ 0.67
TROAP-212ENST00000550346 CFAP65Q6ZU64 1925 aaKnown RBP19.26■□□□□ 0.67
TROAP-212ENST00000550346 UNC13BO14795 1591 aa19.26■□□□□ 0.67
TROAP-212ENST00000550346 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
TROAP-212ENST00000550346 ZC3H13Q5T200 1668 aaKnown RBP19.26■□□□□ 0.67
TROAP-212ENST00000550346 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
TROAP-212ENST00000550346 FBXO31Q5XUX0 539 aaPredicted RBP19.25■□□□□ 0.67
TROAP-212ENST00000550346 SETD1BQ9UPS6 1966 aaKnown RBP19.24■□□□□ 0.67
TROAP-212ENST00000550346 MPHOSPH9Q99550 1183 aa19.24■□□□□ 0.67
TROAP-212ENST00000550346 CEP152O94986 1710 aa19.24■□□□□ 0.67
TROAP-212ENST00000550346 PKD2Q13563 968 aa19.22■□□□□ 0.67
TROAP-212ENST00000550346 LMTK2Q8IWU2 1503 aa19.21■□□□□ 0.67
TROAP-212ENST00000550346 C3P01024 1663 aa19.21■□□□□ 0.67
TROAP-212ENST00000550346 ARHGAP31Q2M1Z3 1444 aa19.21■□□□□ 0.67
TROAP-212ENST00000550346 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
TROAP-212ENST00000550346 CAMSAP1Q5T5Y3 1602 aa19.2■□□□□ 0.66
TROAP-212ENST00000550346 IQGAP3Q86VI3 1631 aa19.2■□□□□ 0.66
TROAP-212ENST00000550346 PZPP20742 1482 aa19.2■□□□□ 0.66
TROAP-212ENST00000550346 NPATQ14207 1427 aa19.18■□□□□ 0.66
TROAP-212ENST00000550346 TET3O43151 1660 aa19.18■□□□□ 0.66
TROAP-212ENST00000550346 TNRQ92752 1358 aa19.17■□□□□ 0.66
TROAP-212ENST00000550346 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
TROAP-212ENST00000550346 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
TROAP-212ENST00000550346 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
TROAP-212ENST00000550346 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
TROAP-212ENST00000550346 DHX57Q6P158 1386 aaKnown RBP19.13■□□□□ 0.65
TROAP-212ENST00000550346 FOXD1Q16676 465 aa19.12■□□□□ 0.65
TROAP-212ENST00000550346 ERVK-7P63135 1459 aa19.11■□□□□ 0.65
TROAP-212ENST00000550346 UHRF1BP1Q6BDS2 1440 aa19.11■□□□□ 0.65
TROAP-212ENST00000550346 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
TROAP-212ENST00000550346 THEMISQ8N1K5 641 aaPredicted RBP19.1■□□□□ 0.65
TROAP-212ENST00000550346 E9PCH4 1651 aa19.1■□□□□ 0.65
TROAP-212ENST00000550346 PREX1Q8TCU6 1659 aa19.09■□□□□ 0.65
TROAP-212ENST00000550346 IDI1Q13907 227 aa19.09■□□□□ 0.65
TROAP-212ENST00000550346 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
TROAP-212ENST00000550346 NOS1P29475 1434 aa19.07■□□□□ 0.64
TROAP-212ENST00000550346 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
TROAP-212ENST00000550346 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
TROAP-212ENST00000550346 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
TROAP-212ENST00000550346 PTPRTO14522 1441 aa19.03■□□□□ 0.64
TROAP-212ENST00000550346 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
TROAP-212ENST00000550346 SPHKAPQ2M3C7 1700 aa19.02■□□□□ 0.63
TROAP-212ENST00000550346 HSPA2P54652 639 aa19.01■□□□□ 0.63
TROAP-212ENST00000550346 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
TROAP-212ENST00000550346 EID1Q9Y6B2 187 aa19■□□□□ 0.63
TROAP-212ENST00000550346 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
TROAP-212ENST00000550346 ANKLE2Q86XL3 938 aa18.99■□□□□ 0.63
TROAP-212ENST00000550346 MYO3AQ8NEV4 1616 aa18.99■□□□□ 0.63
TROAP-212ENST00000550346 SYNMO15061 1565 aa18.98■□□□□ 0.63
TROAP-212ENST00000550346 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
TROAP-212ENST00000550346 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
TROAP-212ENST00000550346 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
TROAP-212ENST00000550346 ANKRD30BQ9BXX2 1392 aa18.96■□□□□ 0.63
TROAP-212ENST00000550346 TRPM2O94759 1503 aa18.96■□□□□ 0.63
TROAP-212ENST00000550346 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
TROAP-212ENST00000550346 RGL3Q3MIN7 710 aa18.95■□□□□ 0.62
TROAP-212ENST00000550346 TXNDC2Q86VQ3 553 aa18.95■□□□□ 0.62
TROAP-212ENST00000550346 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
TROAP-212ENST00000550346 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
TROAP-212ENST00000550346 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
TROAP-212ENST00000550346 BCANQ96GW7 911 aa18.94■□□□□ 0.62
TROAP-212ENST00000550346 KIF1BO60333 1816 aa18.93■□□□□ 0.62
TROAP-212ENST00000550346 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
TROAP-212ENST00000550346 SIN3AQ96ST3 1273 aa18.93■□□□□ 0.62
TROAP-212ENST00000550346 ZNF142P52746 1687 aaPredicted RBP18.92■□□□□ 0.62
TROAP-212ENST00000550346 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
TROAP-212ENST00000550346 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
TROAP-212ENST00000550346 RPGRIP1LQ68CZ1 1315 aa18.91■□□□□ 0.62
TROAP-212ENST00000550346 NCKAP5LQ9HCH0 1330 aa18.91■□□□□ 0.62
TROAP-212ENST00000550346 UBR1Q8IWV7 1749 aa18.9■□□□□ 0.62
TROAP-212ENST00000550346 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
TROAP-212ENST00000550346 CLTCL1P53675 1640 aa18.89■□□□□ 0.62
TROAP-212ENST00000550346 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms