RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 TRIM52Q96A61 297 aa17.17■□□□□ 0.34
CNOT2-223ENST00000550160 ABCA6Q8N139 1617 aa17.17■□□□□ 0.34
CNOT2-223ENST00000550160 DIP2CQ9Y2E4 1556 aa17.16■□□□□ 0.34
CNOT2-223ENST00000550160 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
CNOT2-223ENST00000550160 ATP10AO60312 1499 aa17.14■□□□□ 0.33
CNOT2-223ENST00000550160 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
CNOT2-223ENST00000550160 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
CNOT2-223ENST00000550160 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-223ENST00000550160 KIF3BO15066 747 aa17.11■□□□□ 0.33
CNOT2-223ENST00000550160 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
CNOT2-223ENST00000550160 NUP155O75694 1391 aa17.1■□□□□ 0.33
CNOT2-223ENST00000550160 KANK1Q14678 1352 aa17.1■□□□□ 0.33
CNOT2-223ENST00000550160 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
CNOT2-223ENST00000550160 UNC13BO14795 1591 aa17.09■□□□□ 0.33
CNOT2-223ENST00000550160 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
CNOT2-223ENST00000550160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.323e-7■■■□□ 18.6
CNOT2-223ENST00000550160 AGLP35573 1532 aa17.06■□□□□ 0.32
CNOT2-223ENST00000550160 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
CNOT2-223ENST00000550160 BCORL1Q5H9F3 1711 aa17.06■□□□□ 0.32
CNOT2-223ENST00000550160 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
CNOT2-223ENST00000550160 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
CNOT2-223ENST00000550160 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
CNOT2-223ENST00000550160 RNF17Q9BXT8 1623 aaKnown RBP17.04■□□□□ 0.32
CNOT2-223ENST00000550160 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
CNOT2-223ENST00000550160 GGT6Q6P531 493 aa17.03■□□□□ 0.32
CNOT2-223ENST00000550160 PZPP20742 1482 aa17.03■□□□□ 0.32
CNOT2-223ENST00000550160 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.32
CNOT2-223ENST00000550160 IQGAP3Q86VI3 1631 aa17.02■□□□□ 0.31
CNOT2-223ENST00000550160 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
CNOT2-223ENST00000550160 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
CNOT2-223ENST00000550160 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
CNOT2-223ENST00000550160 PKD2Q13563 968 aa16.98■□□□□ 0.31
CNOT2-223ENST00000550160 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
CNOT2-223ENST00000550160 WASHC2CQ9Y4E1 1318 aa16.97■□□□□ 0.31
CNOT2-223ENST00000550160 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.3
CNOT2-223ENST00000550160 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
CNOT2-223ENST00000550160 TET3O43151 1660 aa16.94■□□□□ 0.3
CNOT2-223ENST00000550160 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
CNOT2-223ENST00000550160 ABCC3O15438 1527 aa16.93■□□□□ 0.3
CNOT2-223ENST00000550160 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
CNOT2-223ENST00000550160 MLECQ14165 292 aa16.92■□□□□ 0.3
CNOT2-223ENST00000550160 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
CNOT2-223ENST00000550160 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
CNOT2-223ENST00000550160 SIGLEC1Q9BZZ2 1709 aa16.9■□□□□ 0.3
CNOT2-223ENST00000550160 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
CNOT2-223ENST00000550160 CEP152O94986 1710 aa16.9■□□□□ 0.3
CNOT2-223ENST00000550160 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
CNOT2-223ENST00000550160 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
CNOT2-223ENST00000550160 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
CNOT2-223ENST00000550160 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
CNOT2-223ENST00000550160 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
CNOT2-223ENST00000550160 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
CNOT2-223ENST00000550160 E9PCH4 1651 aa16.85■□□□□ 0.29
CNOT2-223ENST00000550160 NPATQ14207 1427 aa16.85■□□□□ 0.29
CNOT2-223ENST00000550160 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
CNOT2-223ENST00000550160 CCDC144AA2RUR9 1427 aa16.84■□□□□ 0.29
CNOT2-223ENST00000550160 CLTCQ00610 1675 aaKnown RBP16.82■□□□□ 0.28
CNOT2-223ENST00000550160 PTPRTO14522 1441 aa16.82■□□□□ 0.28
CNOT2-223ENST00000550160 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
CNOT2-223ENST00000550160 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
CNOT2-223ENST00000550160 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
CNOT2-223ENST00000550160 TRPM2O94759 1503 aa16.81■□□□□ 0.28
CNOT2-223ENST00000550160 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
CNOT2-223ENST00000550160 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
CNOT2-223ENST00000550160 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
CNOT2-223ENST00000550160 MROH2AA6NES4 1674 aa16.79■□□□□ 0.28
CNOT2-223ENST00000550160 PLA2R1Q13018 1463 aa16.79■□□□□ 0.28
CNOT2-223ENST00000550160 FER1L4A9Z1Z3 1794 aa16.78■□□□□ 0.28
CNOT2-223ENST00000550160 NOS1P29475 1434 aa16.77■□□□□ 0.27
CNOT2-223ENST00000550160 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
CNOT2-223ENST00000550160 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
CNOT2-223ENST00000550160 PREX1Q8TCU6 1659 aa16.74■□□□□ 0.27
CNOT2-223ENST00000550160 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
CNOT2-223ENST00000550160 MADDQ8WXG6 1647 aa16.73■□□□□ 0.27
CNOT2-223ENST00000550160 SPATA31D1Q6ZQQ2 1576 aa16.72■□□□□ 0.27
CNOT2-223ENST00000550160 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
CNOT2-223ENST00000550160 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
CNOT2-223ENST00000550160 RIMS1Q86UR5 1692 aaKnown RBP16.7■□□□□ 0.26
CNOT2-223ENST00000550160 SYNMO15061 1565 aa16.7■□□□□ 0.26
CNOT2-223ENST00000550160 TNRQ92752 1358 aa16.7■□□□□ 0.26
CNOT2-223ENST00000550160 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
CNOT2-223ENST00000550160 NEURL4Q96JN8 1562 aa16.68■□□□□ 0.26
CNOT2-223ENST00000550160 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
CNOT2-223ENST00000550160 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
CNOT2-223ENST00000550160 C3P01024 1663 aa16.67■□□□□ 0.26
CNOT2-223ENST00000550160 CHGAP10645 457 aaKnown RBP16.67■□□□□ 0.26
CNOT2-223ENST00000550160 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
CNOT2-223ENST00000550160 KIF1BO60333 1816 aa16.66■□□□□ 0.26
CNOT2-223ENST00000550160 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
CNOT2-223ENST00000550160 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
CNOT2-223ENST00000550160 SPATA31E1Q6ZUB1 1445 aa16.66■□□□□ 0.26
CNOT2-223ENST00000550160 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
CNOT2-223ENST00000550160 IDI1Q13907 227 aa16.65■□□□□ 0.26
CNOT2-223ENST00000550160 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
CNOT2-223ENST00000550160 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
CNOT2-223ENST00000550160 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
CNOT2-223ENST00000550160 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
CNOT2-223ENST00000550160 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
CNOT2-223ENST00000550160 PTPRMP28827 1452 aa16.62■□□□□ 0.25
CNOT2-223ENST00000550160 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms