RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 NUP155O75694 1391 aa16.92■□□□□ 0.3
CTDSP2-206ENST00000550144 KDM5DQ9BY66 1539 aa16.92■□□□□ 0.3
CTDSP2-206ENST00000550144 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
CTDSP2-206ENST00000550144 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
CTDSP2-206ENST00000550144 PZPP20742 1482 aa16.91■□□□□ 0.3
CTDSP2-206ENST00000550144 YEATS2Q9ULM3 1422 aa16.9■□□□□ 0.3
CTDSP2-206ENST00000550144 KIF3BO15066 747 aa16.88■□□□□ 0.29
CTDSP2-206ENST00000550144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTDSP2-206ENST00000550144 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
CTDSP2-206ENST00000550144 ATP10AO60312 1499 aa16.86■□□□□ 0.29
CTDSP2-206ENST00000550144 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
CTDSP2-206ENST00000550144 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
CTDSP2-206ENST00000550144 KANK1Q14678 1352 aa16.85■□□□□ 0.29
CTDSP2-206ENST00000550144 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
CTDSP2-206ENST00000550144 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
CTDSP2-206ENST00000550144 PKD2Q13563 968 aa16.83■□□□□ 0.28
CTDSP2-206ENST00000550144 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
CTDSP2-206ENST00000550144 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
CTDSP2-206ENST00000550144 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
CTDSP2-206ENST00000550144 FOXD1Q16676 465 aa16.81■□□□□ 0.28
CTDSP2-206ENST00000550144 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
CTDSP2-206ENST00000550144 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
CTDSP2-206ENST00000550144 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
CTDSP2-206ENST00000550144 ANKRD30BQ9BXX2 1392 aa16.78■□□□□ 0.28
CTDSP2-206ENST00000550144 NEUROD1Q13562 356 aa16.78■□□□□ 0.28
CTDSP2-206ENST00000550144 GGT6Q6P531 493 aa16.78■□□□□ 0.28
CTDSP2-206ENST00000550144 AGLP35573 1532 aa16.78■□□□□ 0.28
CTDSP2-206ENST00000550144 TET3O43151 1660 aa16.75■□□□□ 0.27
CTDSP2-206ENST00000550144 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
CTDSP2-206ENST00000550144 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
CTDSP2-206ENST00000550144 WASHC2CQ9Y4E1 1318 aa16.72■□□□□ 0.27
CTDSP2-206ENST00000550144 CEP152O94986 1710 aa16.72■□□□□ 0.27
CTDSP2-206ENST00000550144 ABCC3O15438 1527 aa16.71■□□□□ 0.27
CTDSP2-206ENST00000550144 E9PCH4 1651 aa16.71■□□□□ 0.27
CTDSP2-206ENST00000550144 ZC3H13Q5T200 1668 aaKnown RBP16.71■□□□□ 0.27
CTDSP2-206ENST00000550144 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
CTDSP2-206ENST00000550144 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
CTDSP2-206ENST00000550144 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
CTDSP2-206ENST00000550144 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
CTDSP2-206ENST00000550144 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
CTDSP2-206ENST00000550144 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
CTDSP2-206ENST00000550144 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
CTDSP2-206ENST00000550144 CCDC144AA2RUR9 1427 aa16.66■□□□□ 0.26
CTDSP2-206ENST00000550144 MLECQ14165 292 aa16.66■□□□□ 0.26
CTDSP2-206ENST00000550144 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
CTDSP2-206ENST00000550144 PTPRTO14522 1441 aa16.65■□□□□ 0.26
CTDSP2-206ENST00000550144 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
CTDSP2-206ENST00000550144 TRPM2O94759 1503 aa16.64■□□□□ 0.25
CTDSP2-206ENST00000550144 NPATQ14207 1427 aa16.63■□□□□ 0.25
CTDSP2-206ENST00000550144 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
CTDSP2-206ENST00000550144 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
CTDSP2-206ENST00000550144 FBXO41Q8TF61 875 aa16.61■□□□□ 0.25
CTDSP2-206ENST00000550144 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
CTDSP2-206ENST00000550144 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
CTDSP2-206ENST00000550144 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
CTDSP2-206ENST00000550144 CNTLNQ9NXG0 1405 aa16.58■□□□□ 0.24
CTDSP2-206ENST00000550144 CLTCL1P53675 1640 aa16.57■□□□□ 0.24
CTDSP2-206ENST00000550144 NOS1P29475 1434 aa16.56■□□□□ 0.24
CTDSP2-206ENST00000550144 PREX1Q8TCU6 1659 aa16.54■□□□□ 0.24
CTDSP2-206ENST00000550144 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
CTDSP2-206ENST00000550144 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
CTDSP2-206ENST00000550144 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
CTDSP2-206ENST00000550144 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
CTDSP2-206ENST00000550144 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.24
CTDSP2-206ENST00000550144 ERVK-7P63135 1459 aa16.52■□□□□ 0.23
CTDSP2-206ENST00000550144 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
CTDSP2-206ENST00000550144 SYNMO15061 1565 aa16.51■□□□□ 0.23
CTDSP2-206ENST00000550144 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
CTDSP2-206ENST00000550144 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
CTDSP2-206ENST00000550144 KIF1BO60333 1816 aa16.5■□□□□ 0.23
CTDSP2-206ENST00000550144 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
CTDSP2-206ENST00000550144 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
CTDSP2-206ENST00000550144 FER1L4A9Z1Z3 1794 aa16.5■□□□□ 0.23
CTDSP2-206ENST00000550144 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
CTDSP2-206ENST00000550144 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
CTDSP2-206ENST00000550144 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
CTDSP2-206ENST00000550144 ADGRB3O60242 1522 aa16.46■□□□□ 0.23
CTDSP2-206ENST00000550144 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
CTDSP2-206ENST00000550144 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
CTDSP2-206ENST00000550144 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
CTDSP2-206ENST00000550144 IDI1Q13907 227 aa16.45■□□□□ 0.22
CTDSP2-206ENST00000550144 UHRF1BP1Q6BDS2 1440 aa16.45■□□□□ 0.22
CTDSP2-206ENST00000550144 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
CTDSP2-206ENST00000550144 ZNF326Q5BKZ1 582 aaKnown RBP16.44■□□□□ 0.22
CTDSP2-206ENST00000550144 STAC3Q96MF2 364 aa16.44■□□□□ 0.22
CTDSP2-206ENST00000550144 C3P01024 1663 aa16.43■□□□□ 0.22
CTDSP2-206ENST00000550144 PTPRMP28827 1452 aa16.42■□□□□ 0.22
CTDSP2-206ENST00000550144 TNRQ92752 1358 aa16.42■□□□□ 0.22
CTDSP2-206ENST00000550144 RIMS1Q86UR5 1692 aaKnown RBP16.41■□□□□ 0.22
CTDSP2-206ENST00000550144 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
CTDSP2-206ENST00000550144 LMTK3Q96Q04 1460 aa16.41■□□□□ 0.22
CTDSP2-206ENST00000550144 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
CTDSP2-206ENST00000550144 CEBPAP49715 358 aaPredicted RBP16.4■□□□□ 0.22
CTDSP2-206ENST00000550144 TMEM131LA2VDJ0 1609 aa16.39■□□□□ 0.21
CTDSP2-206ENST00000550144 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
CTDSP2-206ENST00000550144 MYOM2P54296 1465 aa16.38■□□□□ 0.21
CTDSP2-206ENST00000550144 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
CTDSP2-206ENST00000550144 IFT172Q9UG01 1749 aa16.38■□□□□ 0.21
CTDSP2-206ENST00000550144 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
CTDSP2-206ENST00000550144 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms