RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 EHBP1L1Q8N3D4 1523 aa15.84■□□□□ 0.13
TRAFD1-207ENST00000550051 UBAP1LF5GYI3 381 aa15.84■□□□□ 0.13
TRAFD1-207ENST00000550051 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
TRAFD1-207ENST00000550051 DNMT1P26358 1616 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-207ENST00000550051 KIF3BO15066 747 aa15.82■□□□□ 0.12
TRAFD1-207ENST00000550051 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
TRAFD1-207ENST00000550051 FBXO31Q5XUX0 539 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-207ENST00000550051 FAM135AQ9P2D6 1515 aa15.8■□□□□ 0.12
TRAFD1-207ENST00000550051 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
TRAFD1-207ENST00000550051 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
TRAFD1-207ENST00000550051 TNRQ92752 1358 aa15.78■□□□□ 0.12
TRAFD1-207ENST00000550051 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
TRAFD1-207ENST00000550051 PZPP20742 1482 aa15.78■□□□□ 0.12
TRAFD1-207ENST00000550051 NCOA2Q15596 1464 aa15.77■□□□□ 0.11
TRAFD1-207ENST00000550051 TSPY4P0CV99 314 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 TSPY10P0CW01 314 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 ANKLE2Q86XL3 938 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 KDM5DQ9BY66 1539 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 CAMSAP2Q08AD1 1489 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 MIA2Q96PC5 1412 aa15.76■□□□□ 0.11
TRAFD1-207ENST00000550051 POLR1AO95602 1720 aaPredicted RBP15.75■□□□□ 0.11
TRAFD1-207ENST00000550051 ARHGEF5Q12774 1597 aa15.74■□□□□ 0.11
TRAFD1-207ENST00000550051 NEURL4Q96JN8 1562 aa15.74■□□□□ 0.11
TRAFD1-207ENST00000550051 CPS1P31327 1500 aa15.73■□□□□ 0.11
TRAFD1-207ENST00000550051 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
TRAFD1-207ENST00000550051 TOM1O60784 492 aa15.73■□□□□ 0.11
TRAFD1-207ENST00000550051 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
TRAFD1-207ENST00000550051 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAFD1-207ENST00000550051 MED14O60244 1454 aa15.71■□□□□ 0.11
TRAFD1-207ENST00000550051 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
TRAFD1-207ENST00000550051 HSPA1LP34931 641 aa15.69■□□□□ 0.1
TRAFD1-207ENST00000550051 UGGT1Q9NYU2 1555 aa15.69■□□□□ 0.1
TRAFD1-207ENST00000550051 VWDEQ8N2E2 1590 aa15.67■□□□□ 0.1
TRAFD1-207ENST00000550051 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
TRAFD1-207ENST00000550051 NPHP4O75161 1426 aaPredicted RBP15.67■□□□□ 0.1
TRAFD1-207ENST00000550051 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
TRAFD1-207ENST00000550051 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
TRAFD1-207ENST00000550051 RNF17Q9BXT8 1623 aaKnown RBP15.66■□□□□ 0.1
TRAFD1-207ENST00000550051 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-207ENST00000550051 ABCC3O15438 1527 aa15.64■□□□□ 0.09
TRAFD1-207ENST00000550051 ZC3H13Q5T200 1668 aaKnown RBP15.64■□□□□ 0.09
TRAFD1-207ENST00000550051 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
TRAFD1-207ENST00000550051 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
TRAFD1-207ENST00000550051 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-207ENST00000550051 IQGAP1P46940 1657 aa15.62■□□□□ 0.09
TRAFD1-207ENST00000550051 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
TRAFD1-207ENST00000550051 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
TRAFD1-207ENST00000550051 CFAP65Q6ZU64 1925 aaKnown RBP15.6■□□□□ 0.09
TRAFD1-207ENST00000550051 ERVK-7P63135 1459 aa15.6■□□□□ 0.09
TRAFD1-207ENST00000550051 MSH5O43196 834 aa15.6■□□□□ 0.09
TRAFD1-207ENST00000550051 KCNA4P22459 653 aa15.6■□□□□ 0.09
TRAFD1-207ENST00000550051 MYOM3Q5VTT5 1437 aa15.6■□□□□ 0.09
TRAFD1-207ENST00000550051 MROH1Q8NDA8 1641 aa15.59■□□□□ 0.09
TRAFD1-207ENST00000550051 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
TRAFD1-207ENST00000550051 STRCP1A6NGW2 1772 aa15.59■□□□□ 0.09
TRAFD1-207ENST00000550051 LRRC7Q96NW7 1537 aa15.58■□□□□ 0.09
TRAFD1-207ENST00000550051 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.09
TRAFD1-207ENST00000550051 MED1Q15648 1581 aaPredicted RBP15.58■□□□□ 0.09
TRAFD1-207ENST00000550051 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
TRAFD1-207ENST00000550051 ARHGAP31Q2M1Z3 1444 aa15.57■□□□□ 0.08
TRAFD1-207ENST00000550051 UBR1Q8IWV7 1749 aa15.57■□□□□ 0.08
TRAFD1-207ENST00000550051 CEP152O94986 1710 aa15.55■□□□□ 0.08
TRAFD1-207ENST00000550051 LTKP29376 864 aa15.55■□□□□ 0.08
TRAFD1-207ENST00000550051 TXNDC2Q86VQ3 553 aa15.55■□□□□ 0.08
TRAFD1-207ENST00000550051 ARHGAP23Q9P227 1491 aa15.54■□□□□ 0.08
TRAFD1-207ENST00000550051 SLIT1O75093 1534 aa15.53■□□□□ 0.08
TRAFD1-207ENST00000550051 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
TRAFD1-207ENST00000550051 SYNMO15061 1565 aa15.53■□□□□ 0.08
TRAFD1-207ENST00000550051 ABCC5O15440 1437 aa15.52■□□□□ 0.08
TRAFD1-207ENST00000550051 KIF15Q9NS87 1388 aa15.52■□□□□ 0.08
TRAFD1-207ENST00000550051 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.08
TRAFD1-207ENST00000550051 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
TRAFD1-207ENST00000550051 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
TRAFD1-207ENST00000550051 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-207ENST00000550051 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.075e-6■■■□□ 14.8
TRAFD1-207ENST00000550051 TMEM2Q9UHN6 1383 aa15.48■□□□□ 0.07
TRAFD1-207ENST00000550051 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-207ENST00000550051 IDI1Q13907 227 aa15.47■□□□□ 0.07
TRAFD1-207ENST00000550051 CROCC2H7BZ55 1655 aa15.47■□□□□ 0.07
TRAFD1-207ENST00000550051 KDM5AP29375 1690 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-207ENST00000550051 KANK1Q14678 1352 aa15.47■□□□□ 0.07
TRAFD1-207ENST00000550051 PTPN23Q9H3S7 1636 aa15.46■□□□□ 0.07
TRAFD1-207ENST00000550051 DAPK1P53355 1430 aa15.45■□□□□ 0.06
TRAFD1-207ENST00000550051 APLP2Q06481 763 aa15.45■□□□□ 0.06
TRAFD1-207ENST00000550051 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
TRAFD1-207ENST00000550051 PIK3C2BO00750 1634 aa15.45■□□□□ 0.06
TRAFD1-207ENST00000550051 FAM135BQ49AJ0 1406 aa15.44■□□□□ 0.06
TRAFD1-207ENST00000550051 LMTK2Q8IWU2 1503 aa15.44■□□□□ 0.06
TRAFD1-207ENST00000550051 KCNA6P17658 529 aa15.44■□□□□ 0.06
TRAFD1-207ENST00000550051 ANKRD30AQ9BXX3 1397 aa15.44■□□□□ 0.06
TRAFD1-207ENST00000550051 TET3O43151 1660 aa15.42■□□□□ 0.06
TRAFD1-207ENST00000550051 RGS17Q9UGC6 210 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-207ENST00000550051 EFCAB6Q5THR3 1501 aa15.42■□□□□ 0.06
TRAFD1-207ENST00000550051 FGD6Q6ZV73 1430 aa15.42■□□□□ 0.06
TRAFD1-207ENST00000550051 SLC52A1Q9NWF4 448 aa15.41■□□□□ 0.06
TRAFD1-207ENST00000550051 NOS1P29475 1434 aa15.41■□□□□ 0.06
TRAFD1-207ENST00000550051 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
TRAFD1-207ENST00000550051 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
TRAFD1-207ENST00000550051 PROSER2Q86WR7 435 aaPredicted RBP15.39■□□□□ 0.05
TRAFD1-207ENST00000550051 SLC26A8Q96RN1 970 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms