RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 KANK1Q14678 1352 aa10.57□□□□□ -0.72
CALCOCO1-215ENST00000549688 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
CALCOCO1-215ENST00000549688 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
CALCOCO1-215ENST00000549688 YEATS2Q9ULM3 1422 aa10.56□□□□□ -0.72
CALCOCO1-215ENST00000549688 PRDM15P57071 1507 aaPredicted RBP10.55□□□□□ -0.72
CALCOCO1-215ENST00000549688 ZC3H13Q5T200 1668 aaKnown RBP10.55□□□□□ -0.72
CALCOCO1-215ENST00000549688 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
CALCOCO1-215ENST00000549688 IQGAP3Q86VI3 1631 aa10.54□□□□□ -0.72
CALCOCO1-215ENST00000549688 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
CALCOCO1-215ENST00000549688 NUP155O75694 1391 aa10.52□□□□□ -0.72
CALCOCO1-215ENST00000549688 KIF3BO15066 747 aa10.52□□□□□ -0.73
CALCOCO1-215ENST00000549688 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
CALCOCO1-215ENST00000549688 VWDEQ8N2E2 1590 aa10.51□□□□□ -0.73
CALCOCO1-215ENST00000549688 TET3O43151 1660 aa10.5□□□□□ -0.73
CALCOCO1-215ENST00000549688 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
CALCOCO1-215ENST00000549688 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
CALCOCO1-215ENST00000549688 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
CALCOCO1-215ENST00000549688 CNTLNQ9NXG0 1405 aa10.49□□□□□ -0.73
CALCOCO1-215ENST00000549688 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
CALCOCO1-215ENST00000549688 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
CALCOCO1-215ENST00000549688 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
CALCOCO1-215ENST00000549688 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-215ENST00000549688 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
CALCOCO1-215ENST00000549688 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
CALCOCO1-215ENST00000549688 PZPP20742 1482 aa10.47□□□□□ -0.73
CALCOCO1-215ENST00000549688 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
CALCOCO1-215ENST00000549688 GGT6Q6P531 493 aa10.46□□□□□ -0.73
CALCOCO1-215ENST00000549688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.733e-6■□□□□ 8.2
CALCOCO1-215ENST00000549688 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
CALCOCO1-215ENST00000549688 ABCC3O15438 1527 aa10.46□□□□□ -0.74
CALCOCO1-215ENST00000549688 CAMSAP1Q5T5Y3 1602 aa10.46□□□□□ -0.74
CALCOCO1-215ENST00000549688 MROH2AA6NES4 1674 aa10.46□□□□□ -0.74
CALCOCO1-215ENST00000549688 CEP152O94986 1710 aa10.45□□□□□ -0.74
CALCOCO1-215ENST00000549688 ARHGAP31Q2M1Z3 1444 aa10.45□□□□□ -0.74
CALCOCO1-215ENST00000549688 SIGLEC1Q9BZZ2 1709 aa10.44□□□□□ -0.74
CALCOCO1-215ENST00000549688 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
CALCOCO1-215ENST00000549688 E9PCH4 1651 aa10.43□□□□□ -0.74
CALCOCO1-215ENST00000549688 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
CALCOCO1-215ENST00000549688 CLTCQ00610 1675 aaKnown RBP10.42□□□□□ -0.74
CALCOCO1-215ENST00000549688 PKD2Q13563 968 aa10.42□□□□□ -0.74
CALCOCO1-215ENST00000549688 ZEB1P37275 1124 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO1-215ENST00000549688 TRPM2O94759 1503 aa10.4□□□□□ -0.74
CALCOCO1-215ENST00000549688 TIMELESSQ9UNS1 1208 aa10.4□□□□□ -0.74
CALCOCO1-215ENST00000549688 CCDC144AA2RUR9 1427 aa10.39□□□□□ -0.75
CALCOCO1-215ENST00000549688 NPATQ14207 1427 aa10.39□□□□□ -0.75
CALCOCO1-215ENST00000549688 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
CALCOCO1-215ENST00000549688 ADAMTSL3P82987 1691 aa10.38□□□□□ -0.75
CALCOCO1-215ENST00000549688 MLECQ14165 292 aa10.38□□□□□ -0.75
CALCOCO1-215ENST00000549688 PTPRTO14522 1441 aa10.38□□□□□ -0.75
CALCOCO1-215ENST00000549688 PREX1Q8TCU6 1659 aa10.38□□□□□ -0.75
CALCOCO1-215ENST00000549688 NEURL4Q96JN8 1562 aa10.37□□□□□ -0.75
CALCOCO1-215ENST00000549688 MADDQ8WXG6 1647 aa10.36□□□□□ -0.75
CALCOCO1-215ENST00000549688 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
CALCOCO1-215ENST00000549688 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
CALCOCO1-215ENST00000549688 KIF1BO60333 1816 aa10.35□□□□□ -0.75
CALCOCO1-215ENST00000549688 NOS1P29475 1434 aa10.35□□□□□ -0.75
CALCOCO1-215ENST00000549688 SLC52A1Q9NWF4 448 aa10.35□□□□□ -0.75
CALCOCO1-215ENST00000549688 ERVK-7P63135 1459 aa10.35□□□□□ -0.75
CALCOCO1-215ENST00000549688 C3P01024 1663 aa10.34□□□□□ -0.75
CALCOCO1-215ENST00000549688 RIMS1Q86UR5 1692 aaKnown RBP10.34□□□□□ -0.75
CALCOCO1-215ENST00000549688 PIK3C2BO00750 1634 aa10.34□□□□□ -0.75
CALCOCO1-215ENST00000549688 TONSLQ96HA7 1378 aa10.34□□□□□ -0.75
CALCOCO1-215ENST00000549688 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
CALCOCO1-215ENST00000549688 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
CALCOCO1-215ENST00000549688 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
CALCOCO1-215ENST00000549688 PLA2R1Q13018 1463 aa10.32□□□□□ -0.76
CALCOCO1-215ENST00000549688 NLRP1Q9C000 1473 aa10.32□□□□□ -0.76
CALCOCO1-215ENST00000549688 FOXD1Q16676 465 aa10.32□□□□□ -0.76
CALCOCO1-215ENST00000549688 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CALCOCO1-215ENST00000549688 SYNMO15061 1565 aa10.31□□□□□ -0.76
CALCOCO1-215ENST00000549688 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
CALCOCO1-215ENST00000549688 TNRQ92752 1358 aa10.3□□□□□ -0.76
CALCOCO1-215ENST00000549688 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
CALCOCO1-215ENST00000549688 PTPRMP28827 1452 aa10.29□□□□□ -0.76
CALCOCO1-215ENST00000549688 ADGRB3O60242 1522 aa10.28□□□□□ -0.76
CALCOCO1-215ENST00000549688 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
CALCOCO1-215ENST00000549688 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
CALCOCO1-215ENST00000549688 MYO3AQ8NEV4 1616 aa10.27□□□□□ -0.77
CALCOCO1-215ENST00000549688 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
CALCOCO1-215ENST00000549688 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
CALCOCO1-215ENST00000549688 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO1-215ENST00000549688 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CALCOCO1-215ENST00000549688 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
CALCOCO1-215ENST00000549688 UGGT1Q9NYU2 1555 aa10.26□□□□□ -0.77
CALCOCO1-215ENST00000549688 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO1-215ENST00000549688 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 MYOM2P54296 1465 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 IDI1Q13907 227 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 PPLO60437 1756 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
CALCOCO1-215ENST00000549688 ZNF326Q5BKZ1 582 aaKnown RBP10.23□□□□□ -0.77
CALCOCO1-215ENST00000549688 VGFO15240 615 aaPredicted RBP10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 CEBPAP49715 358 aaPredicted RBP10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 THEMISQ8N1K5 641 aaPredicted RBP10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.22□□□□□ -0.77
CALCOCO1-215ENST00000549688 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms