RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 UNC13BO14795 1591 aa25.61■■□□□ 1.69
LETMD1-220ENST00000549686 NUP155O75694 1391 aa25.6■■□□□ 1.69
LETMD1-220ENST00000549686 KIF3BO15066 747 aa25.58■■□□□ 1.69
LETMD1-220ENST00000549686 MPHOSPH9Q99550 1183 aa25.57■■□□□ 1.68
LETMD1-220ENST00000549686 BCORL1Q5H9F3 1711 aa25.57■■□□□ 1.68
LETMD1-220ENST00000549686 AGLP35573 1532 aa25.56■■□□□ 1.68
LETMD1-220ENST00000549686 KANK1Q14678 1352 aa25.56■■□□□ 1.68
LETMD1-220ENST00000549686 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
LETMD1-220ENST00000549686 SLC4A1APQ9BWU0 796 aaKnown RBP25.54■■□□□ 1.68
LETMD1-220ENST00000549686 PZPP20742 1482 aa25.53■■□□□ 1.68
LETMD1-220ENST00000549686 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
LETMD1-220ENST00000549686 PRDM15P57071 1507 aaPredicted RBP25.52■■□□□ 1.68
LETMD1-220ENST00000549686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.5■■□□□ 1.673e-14■□□□□ 10.9
LETMD1-220ENST00000549686 FAM135AQ9P2D6 1515 aa25.5■■□□□ 1.67
LETMD1-220ENST00000549686 IQGAP3Q86VI3 1631 aa25.49■■□□□ 1.67
LETMD1-220ENST00000549686 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
LETMD1-220ENST00000549686 VWDEQ8N2E2 1590 aa25.47■■□□□ 1.67
LETMD1-220ENST00000549686 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
LETMD1-220ENST00000549686 MROH1Q8NDA8 1641 aa25.45■■□□□ 1.67
LETMD1-220ENST00000549686 LMTK2Q8IWU2 1503 aa25.43■■□□□ 1.66
LETMD1-220ENST00000549686 PKD2Q13563 968 aa25.43■■□□□ 1.66
LETMD1-220ENST00000549686 GGT6Q6P531 493 aa25.43■■□□□ 1.66
LETMD1-220ENST00000549686 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
LETMD1-220ENST00000549686 TET3O43151 1660 aa25.36■■□□□ 1.65
LETMD1-220ENST00000549686 ANKRD30BQ9BXX2 1392 aa25.36■■□□□ 1.65
LETMD1-220ENST00000549686 ABCC3O15438 1527 aa25.35■■□□□ 1.65
LETMD1-220ENST00000549686 ZC3H13Q5T200 1668 aaKnown RBP25.35■■□□□ 1.65
LETMD1-220ENST00000549686 ARID4BQ4LE39 1312 aaPredicted RBP25.35■■□□□ 1.65
LETMD1-220ENST00000549686 RPRD2Q5VT52 1461 aaKnown RBP25.32■■□□□ 1.64
LETMD1-220ENST00000549686 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
LETMD1-220ENST00000549686 ARHGAP31Q2M1Z3 1444 aa25.3■■□□□ 1.64
LETMD1-220ENST00000549686 SIGLEC1Q9BZZ2 1709 aa25.3■■□□□ 1.64
LETMD1-220ENST00000549686 FOXD1Q16676 465 aa25.3■■□□□ 1.64
LETMD1-220ENST00000549686 TIMELESSQ9UNS1 1208 aa25.29■■□□□ 1.64
LETMD1-220ENST00000549686 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
LETMD1-220ENST00000549686 CNTLNQ9NXG0 1405 aa25.26■■□□□ 1.63
LETMD1-220ENST00000549686 MLECQ14165 292 aa25.25■■□□□ 1.63
LETMD1-220ENST00000549686 PTPRTO14522 1441 aa25.25■■□□□ 1.63
LETMD1-220ENST00000549686 CEP152O94986 1710 aa25.25■■□□□ 1.63
LETMD1-220ENST00000549686 E9PCH4 1651 aa25.24■■□□□ 1.63
LETMD1-220ENST00000549686 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
LETMD1-220ENST00000549686 NPATQ14207 1427 aa25.23■■□□□ 1.63
LETMD1-220ENST00000549686 SIN3AQ96ST3 1273 aa25.23■■□□□ 1.63
LETMD1-220ENST00000549686 PLA2R1Q13018 1463 aa25.21■■□□□ 1.63
LETMD1-220ENST00000549686 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.63
LETMD1-220ENST00000549686 NEUROD1Q13562 356 aa25.2■■□□□ 1.62
LETMD1-220ENST00000549686 TRPM2O94759 1503 aa25.19■■□□□ 1.62
LETMD1-220ENST00000549686 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
LETMD1-220ENST00000549686 NOS1P29475 1434 aa25.15■■□□□ 1.62
LETMD1-220ENST00000549686 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
LETMD1-220ENST00000549686 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.61
LETMD1-220ENST00000549686 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
LETMD1-220ENST00000549686 MROH2AA6NES4 1674 aa25.11■■□□□ 1.61
LETMD1-220ENST00000549686 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
LETMD1-220ENST00000549686 SLC52A1Q9NWF4 448 aa25.08■■□□□ 1.61
LETMD1-220ENST00000549686 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
LETMD1-220ENST00000549686 FER1L4A9Z1Z3 1794 aa25.05■■□□□ 1.6
LETMD1-220ENST00000549686 NEURL4Q96JN8 1562 aa25.05■■□□□ 1.6
LETMD1-220ENST00000549686 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
LETMD1-220ENST00000549686 ADAMTSL3P82987 1691 aa25.03■■□□□ 1.6
LETMD1-220ENST00000549686 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
LETMD1-220ENST00000549686 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
LETMD1-220ENST00000549686 SPATA31E1Q6ZUB1 1445 aa25.01■■□□□ 1.59
LETMD1-220ENST00000549686 SYNMO15061 1565 aa25.01■■□□□ 1.59
LETMD1-220ENST00000549686 L3MBTL2Q969R5 705 aa25■■□□□ 1.59
LETMD1-220ENST00000549686 PIK3C2BO00750 1634 aa24.99■■□□□ 1.59
LETMD1-220ENST00000549686 MADDQ8WXG6 1647 aa24.98■■□□□ 1.59
LETMD1-220ENST00000549686 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
LETMD1-220ENST00000549686 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
LETMD1-220ENST00000549686 TNRQ92752 1358 aa24.97■■□□□ 1.59
LETMD1-220ENST00000549686 UGGT1Q9NYU2 1555 aa24.96■■□□□ 1.59
LETMD1-220ENST00000549686 IDI1Q13907 227 aa24.95■■□□□ 1.58
LETMD1-220ENST00000549686 ADGRB3O60242 1522 aa24.93■■□□□ 1.58
LETMD1-220ENST00000549686 C3P01024 1663 aa24.92■■□□□ 1.58
LETMD1-220ENST00000549686 RPGRIP1LQ68CZ1 1315 aa24.91■■□□□ 1.58
LETMD1-220ENST00000549686 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
LETMD1-220ENST00000549686 RGL3Q3MIN7 710 aa24.91■■□□□ 1.58
LETMD1-220ENST00000549686 RIMS1Q86UR5 1692 aaKnown RBP24.91■■□□□ 1.58
LETMD1-220ENST00000549686 KIF1BO60333 1816 aa24.91■■□□□ 1.58
LETMD1-220ENST00000549686 NLRP1Q9C000 1473 aa24.9■■□□□ 1.58
LETMD1-220ENST00000549686 CEBPAP49715 358 aaPredicted RBP24.89■■□□□ 1.58
LETMD1-220ENST00000549686 CHGAP10645 457 aaKnown RBP24.88■■□□□ 1.57
LETMD1-220ENST00000549686 DCAF11Q8TEB1 546 aa24.88■■□□□ 1.57
LETMD1-220ENST00000549686 UHRF1BP1Q6BDS2 1440 aa24.87■■□□□ 1.57
LETMD1-220ENST00000549686 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
LETMD1-220ENST00000549686 ZNF326Q5BKZ1 582 aaKnown RBP24.84■■□□□ 1.57
LETMD1-220ENST00000549686 PTPRMP28827 1452 aa24.83■■□□□ 1.57
LETMD1-220ENST00000549686 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.57
LETMD1-220ENST00000549686 MYOM2P54296 1465 aa24.82■■□□□ 1.56
LETMD1-220ENST00000549686 KDM2AQ9Y2K7 1162 aa24.81■■□□□ 1.56
LETMD1-220ENST00000549686 KDM5AP29375 1690 aaKnown RBP24.81■■□□□ 1.56
LETMD1-220ENST00000549686 A2ML1A8K2U0 1454 aa24.8■■□□□ 1.56
LETMD1-220ENST00000549686 PRAG1Q86YV5 1406 aa24.79■■□□□ 1.56
LETMD1-220ENST00000549686 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
LETMD1-220ENST00000549686 VGFO15240 615 aaPredicted RBP24.77■■□□□ 1.56
LETMD1-220ENST00000549686 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
LETMD1-220ENST00000549686 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
LETMD1-220ENST00000549686 NBPF8Q3BBV2 869 aa24.76■■□□□ 1.55
LETMD1-220ENST00000549686 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
LETMD1-220ENST00000549686 NRXN1Q9ULB1 1477 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms