RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
TCHP-208ENST00000549550 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
TCHP-208ENST00000549550 TNRQ92752 1358 aa24.94■■□□□ 1.58
TCHP-208ENST00000549550 PZPP20742 1482 aa24.94■■□□□ 1.58
TCHP-208ENST00000549550 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
TCHP-208ENST00000549550 FBXO31Q5XUX0 539 aaPredicted RBP24.93■■□□□ 1.58
TCHP-208ENST00000549550 CPS1P31327 1500 aa24.92■■□□□ 1.58
TCHP-208ENST00000549550 CCDC141Q6ZP82 1450 aa24.92■■□□□ 1.58
TCHP-208ENST00000549550 KIF3BO15066 747 aa24.92■■□□□ 1.58
TCHP-208ENST00000549550 CAMSAP2Q08AD1 1489 aa24.9■■□□□ 1.58
TCHP-208ENST00000549550 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
TCHP-208ENST00000549550 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
TCHP-208ENST00000549550 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
TCHP-208ENST00000549550 MED1Q15648 1581 aaPredicted RBP24.88■■□□□ 1.57
TCHP-208ENST00000549550 HSPA1LP34931 641 aa24.87■■□□□ 1.57
TCHP-208ENST00000549550 VWDEQ8N2E2 1590 aa24.86■■□□□ 1.57
TCHP-208ENST00000549550 WASHC2CQ9Y4E1 1318 aa24.86■■□□□ 1.57
TCHP-208ENST00000549550 NCOA2Q15596 1464 aa24.85■■□□□ 1.57
TCHP-208ENST00000549550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.85■■□□□ 1.57
TCHP-208ENST00000549550 DEPDC5O75140 1603 aa24.85■■□□□ 1.57
TCHP-208ENST00000549550 UGGT1Q9NYU2 1555 aa24.84■■□□□ 1.57
TCHP-208ENST00000549550 TOM1O60784 492 aa24.84■■□□□ 1.57
TCHP-208ENST00000549550 NLRP1Q9C000 1473 aa24.83■■□□□ 1.57
TCHP-208ENST00000549550 ANKLE2Q86XL3 938 aa24.83■■□□□ 1.57
TCHP-208ENST00000549550 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
TCHP-208ENST00000549550 MIA2Q96PC5 1412 aa24.82■■□□□ 1.56
TCHP-208ENST00000549550 IQGAP1P46940 1657 aa24.81■■□□□ 1.56
TCHP-208ENST00000549550 THEMISQ8N1K5 641 aaPredicted RBP24.81■■□□□ 1.56
TCHP-208ENST00000549550 RSPH4AQ5TD94 716 aa24.8■■□□□ 1.56
TCHP-208ENST00000549550 MED14O60244 1454 aa24.8■■□□□ 1.56
TCHP-208ENST00000549550 NPHP4O75161 1426 aaPredicted RBP24.79■■□□□ 1.56
TCHP-208ENST00000549550 RNF17Q9BXT8 1623 aaKnown RBP24.79■■□□□ 1.56
TCHP-208ENST00000549550 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
TCHP-208ENST00000549550 ZC3H13Q5T200 1668 aaKnown RBP24.78■■□□□ 1.56
TCHP-208ENST00000549550 STRCP1A6NGW2 1772 aa24.77■■□□□ 1.56
TCHP-208ENST00000549550 CFAP65Q6ZU64 1925 aaKnown RBP24.74■■□□□ 1.55
TCHP-208ENST00000549550 ABCC3O15438 1527 aa24.73■■□□□ 1.55
TCHP-208ENST00000549550 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
TCHP-208ENST00000549550 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
TCHP-208ENST00000549550 EIF2AK4Q9P2K8 1649 aaKnown RBP24.72■■□□□ 1.55
TCHP-208ENST00000549550 MAST1Q9Y2H9 1570 aa24.71■■□□□ 1.55
TCHP-208ENST00000549550 CEP152O94986 1710 aa24.71■■□□□ 1.55
TCHP-208ENST00000549550 SYNMO15061 1565 aa24.7■■□□□ 1.54
TCHP-208ENST00000549550 UBR1Q8IWV7 1749 aa24.69■■□□□ 1.54
TCHP-208ENST00000549550 ERVK-7P63135 1459 aa24.68■■□□□ 1.54
TCHP-208ENST00000549550 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
TCHP-208ENST00000549550 LRRC7Q96NW7 1537 aa24.67■■□□□ 1.54
TCHP-208ENST00000549550 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.53
TCHP-208ENST00000549550 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
TCHP-208ENST00000549550 SENP3Q9H4L4 574 aaPredicted RBP24.61■■□□□ 1.53
TCHP-208ENST00000549550 XIRP1Q702N8 1843 aaKnown RBP24.59■■□□□ 1.53
TCHP-208ENST00000549550 SCAF11Q99590 1463 aaKnown RBP24.58■■□□□ 1.53
TCHP-208ENST00000549550 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
TCHP-208ENST00000549550 VPS8Q8N3P4 1428 aa24.55■■□□□ 1.52
TCHP-208ENST00000549550 SLIT1O75093 1534 aa24.54■■□□□ 1.52
TCHP-208ENST00000549550 MYOM3Q5VTT5 1437 aa24.53■■□□□ 1.52
TCHP-208ENST00000549550 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
TCHP-208ENST00000549550 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
TCHP-208ENST00000549550 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
TCHP-208ENST00000549550 LTKP29376 864 aa24.51■■□□□ 1.51
TCHP-208ENST00000549550 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
TCHP-208ENST00000549550 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
TCHP-208ENST00000549550 TXNDC2Q86VQ3 553 aa24.49■■□□□ 1.51
TCHP-208ENST00000549550 ARHGAP31Q2M1Z3 1444 aa24.49■■□□□ 1.51
TCHP-208ENST00000549550 MAP3K1Q13233 1512 aa24.49■■□□□ 1.51
TCHP-208ENST00000549550 KIF15Q9NS87 1388 aa24.46■■□□□ 1.51
TCHP-208ENST00000549550 ERBINQ96RT1 1412 aa24.45■■□□□ 1.51
TCHP-208ENST00000549550 EID1Q9Y6B2 187 aa24.44■■□□□ 1.5
TCHP-208ENST00000549550 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
TCHP-208ENST00000549550 PTPN23Q9H3S7 1636 aa24.42■■□□□ 1.5
TCHP-208ENST00000549550 RRP7BPQ9NSQ0 103 aa24.41■■□□□ 1.5
TCHP-208ENST00000549550 ABCC5O15440 1437 aa24.41■■□□□ 1.5
TCHP-208ENST00000549550 TMEM2Q9UHN6 1383 aa24.41■■□□□ 1.5
TCHP-208ENST00000549550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
TCHP-208ENST00000549550 RGS17Q9UGC6 210 aaPredicted RBP24.4■■□□□ 1.5
TCHP-208ENST00000549550 EFCAB6Q5THR3 1501 aa24.39■■□□□ 1.49
TCHP-208ENST00000549550 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
TCHP-208ENST00000549550 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
TCHP-208ENST00000549550 FAM135BQ49AJ0 1406 aa24.36■■□□□ 1.49
TCHP-208ENST00000549550 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
TCHP-208ENST00000549550 KANK1Q14678 1352 aa24.36■■□□□ 1.49
TCHP-208ENST00000549550 DAPK1P53355 1430 aa24.35■■□□□ 1.49
TCHP-208ENST00000549550 TMEM94Q12767 1356 aa24.34■■□□□ 1.49
TCHP-208ENST00000549550 TET3O43151 1660 aa24.34■■□□□ 1.49
TCHP-208ENST00000549550 LMTK2Q8IWU2 1503 aa24.33■■□□□ 1.49
TCHP-208ENST00000549550 IDI1Q13907 227 aa24.31■■□□□ 1.48
TCHP-208ENST00000549550 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
TCHP-208ENST00000549550 KCNA6P17658 529 aa24.29■■□□□ 1.48
TCHP-208ENST00000549550 SLC26A8Q96RN1 970 aa24.29■■□□□ 1.48
TCHP-208ENST00000549550 NWD1Q149M9 1564 aa24.29■■□□□ 1.48
TCHP-208ENST00000549550 MYO5BQ9ULV0 1848 aa24.27■■□□□ 1.48
TCHP-208ENST00000549550 PROSER2Q86WR7 435 aaPredicted RBP24.27■■□□□ 1.48
TCHP-208ENST00000549550 RBM33Q96EV2 1170 aaKnown RBP24.27■■□□□ 1.48
TCHP-208ENST00000549550 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
TCHP-208ENST00000549550 ANKRD30AQ9BXX3 1397 aa24.26■■□□□ 1.47
TCHP-208ENST00000549550 NOS1P29475 1434 aa24.26■■□□□ 1.47
TCHP-208ENST00000549550 NKTRP30414 1462 aaKnown RBP24.26■■□□□ 1.47
TCHP-208ENST00000549550 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
TCHP-208ENST00000549550 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
TCHP-208ENST00000549550 POTEAQ6S8J7 498 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms