RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
PRIM1-204ENST00000549549 COLQQ9Y215 455 aaPredicted RBP16.56■□□□□ 0.24
PRIM1-204ENST00000549549 TRAK2O60296 914 aa16.55■□□□□ 0.24
PRIM1-204ENST00000549549 SKIV2LQ15477 1246 aaKnown RBP16.55■□□□□ 0.24
PRIM1-204ENST00000549549 PHOX2BQ99453 314 aa16.54■□□□□ 0.24
PRIM1-204ENST00000549549 SEC24BO95487 1268 aa16.52■□□□□ 0.24
PRIM1-204ENST00000549549 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.24
PRIM1-204ENST00000549549 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
PRIM1-204ENST00000549549 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
PRIM1-204ENST00000549549 MCM6Q14566 821 aa16.52■□□□□ 0.24
PRIM1-204ENST00000549549 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.24
PRIM1-204ENST00000549549 MAP3K7O43318 606 aa16.51■□□□□ 0.23
PRIM1-204ENST00000549549 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
PRIM1-204ENST00000549549 PCDHGA10Q9Y5H3 936 aa16.49■□□□□ 0.23
PRIM1-204ENST00000549549 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
PRIM1-204ENST00000549549 HRCP23327 699 aa16.47■□□□□ 0.23
PRIM1-204ENST00000549549 TYW1BQ6NUM6 668 aa16.45■□□□□ 0.22
PRIM1-204ENST00000549549 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
PRIM1-204ENST00000549549 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
PRIM1-204ENST00000549549 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
PRIM1-204ENST00000549549 BEGAINQ9BUH8 593 aa16.44■□□□□ 0.22
PRIM1-204ENST00000549549 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
PRIM1-204ENST00000549549 OATP04181 439 aa16.42■□□□□ 0.22
PRIM1-204ENST00000549549 METTL3Q86U44 580 aaKnown RBP16.41■□□□□ 0.22
PRIM1-204ENST00000549549 SLC39A7Q92504 469 aa16.41■□□□□ 0.22
PRIM1-204ENST00000549549 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
PRIM1-204ENST00000549549 CCDC82Q8N4S0 544 aa16.4■□□□□ 0.22
PRIM1-204ENST00000549549 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
PRIM1-204ENST00000549549 KDM4FA0A1W2PPD8 638 aa16.39■□□□□ 0.21
PRIM1-204ENST00000549549 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
PRIM1-204ENST00000549549 FNBP4Q8N3X1 1017 aaPredicted RBP16.38■□□□□ 0.21
PRIM1-204ENST00000549549 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
PRIM1-204ENST00000549549 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRIM1-204ENST00000549549 GABBR2O75899 941 aa16.37■□□□□ 0.21
PRIM1-204ENST00000549549 C7P10643 843 aa16.37■□□□□ 0.21
PRIM1-204ENST00000549549 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
PRIM1-204ENST00000549549 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
PRIM1-204ENST00000549549 PXYLP1Q8TE99 480 aa16.36■□□□□ 0.21
PRIM1-204ENST00000549549 PCDHGA4Q9Y5G9 962 aa16.36■□□□□ 0.21
PRIM1-204ENST00000549549 ADGRG1Q9Y653 693 aa16.35■□□□□ 0.21
PRIM1-204ENST00000549549 TTC13Q8NBP0 860 aa16.34■□□□□ 0.21
PRIM1-204ENST00000549549 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
PRIM1-204ENST00000549549 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
PRIM1-204ENST00000549549 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
PRIM1-204ENST00000549549 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
PRIM1-204ENST00000549549 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
PRIM1-204ENST00000549549 PADI6Q6TGC4 694 aa16.31■□□□□ 0.2
PRIM1-204ENST00000549549 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
PRIM1-204ENST00000549549 FOSBP53539 338 aa16.3■□□□□ 0.2
PRIM1-204ENST00000549549 POM121Q96HA1 1249 aa16.3■□□□□ 0.2
PRIM1-204ENST00000549549 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
PRIM1-204ENST00000549549 C6orf132Q5T0Z8 1188 aa16.29■□□□□ 0.2
PRIM1-204ENST00000549549 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
PRIM1-204ENST00000549549 RAD21O60216 631 aa16.28■□□□□ 0.2
PRIM1-204ENST00000549549 NLRP7Q8WX94 980 aa16.28■□□□□ 0.2
PRIM1-204ENST00000549549 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
PRIM1-204ENST00000549549 CLK2P49760 499 aaKnown RBP16.26■□□□□ 0.19
PRIM1-204ENST00000549549 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
PRIM1-204ENST00000549549 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
PRIM1-204ENST00000549549 METRNQ9UJH8 293 aa16.24■□□□□ 0.19
PRIM1-204ENST00000549549 SERPINA10Q9UK55 444 aa16.23■□□□□ 0.19
PRIM1-204ENST00000549549 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
PRIM1-204ENST00000549549 COG6Q9Y2V7 657 aa16.22■□□□□ 0.19
PRIM1-204ENST00000549549 RFC5P40937 340 aa16.21■□□□□ 0.19
PRIM1-204ENST00000549549 ZDHHC16Q969W1 377 aa16.21■□□□□ 0.19
PRIM1-204ENST00000549549 PPP2R2DQ66LE6 453 aa16.2■□□□□ 0.18
PRIM1-204ENST00000549549 TMEM259Q4ZIN3 620 aa16.19■□□□□ 0.18
PRIM1-204ENST00000549549 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.19■□□□□ 0.18
PRIM1-204ENST00000549549 PRSS12P56730 875 aa16.18■□□□□ 0.18
PRIM1-204ENST00000549549 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
PRIM1-204ENST00000549549 SNRKQ9NRH2 765 aa16.18■□□□□ 0.18
PRIM1-204ENST00000549549 TUSC1Q2TAM9 212 aa16.17■□□□□ 0.18
PRIM1-204ENST00000549549 FBXO31Q5XUX0 539 aaPredicted RBP16.17■□□□□ 0.18
PRIM1-204ENST00000549549 ZBTB7CA1YPR0 619 aa16.14■□□□□ 0.17
PRIM1-204ENST00000549549 ZNF454Q8N9F8 522 aa16.14■□□□□ 0.17
PRIM1-204ENST00000549549 CCDC97Q96F63 343 aaPredicted RBP16.14■□□□□ 0.17
PRIM1-204ENST00000549549 PLSCR2Q9NRY7 297 aa16.14■□□□□ 0.17
PRIM1-204ENST00000549549 LIMD1Q9UGP4 676 aa16.14■□□□□ 0.17
PRIM1-204ENST00000549549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
PRIM1-204ENST00000549549 CDCA7LQ96GN5 454 aa16.13■□□□□ 0.17
PRIM1-204ENST00000549549 ADAM33Q9BZ11 813 aa16.13■□□□□ 0.17
PRIM1-204ENST00000549549 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
PRIM1-204ENST00000549549 SPIRE2Q8WWL2 714 aa16.12■□□□□ 0.17
PRIM1-204ENST00000549549 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
PRIM1-204ENST00000549549 TRAIPQ9BWF2 469 aa16.1■□□□□ 0.17
PRIM1-204ENST00000549549 SOCS7O14512 581 aa16.09■□□□□ 0.17
PRIM1-204ENST00000549549 SPTLC1O15269 473 aa16.09■□□□□ 0.17
PRIM1-204ENST00000549549 EYA1Q99502 592 aa16.09■□□□□ 0.17
PRIM1-204ENST00000549549 CD46P15529 392 aa16.08■□□□□ 0.16
PRIM1-204ENST00000549549 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.16
PRIM1-204ENST00000549549 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
PRIM1-204ENST00000549549 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
PRIM1-204ENST00000549549 FAM198AQ9UFP1 575 aa16.07■□□□□ 0.16
PRIM1-204ENST00000549549 RCCD1A6NED2 376 aa16.06■□□□□ 0.16
PRIM1-204ENST00000549549 GJA5P36382 358 aa16.05■□□□□ 0.16
PRIM1-204ENST00000549549 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
PRIM1-204ENST00000549549 NUDT7P0C024 238 aa16.03■□□□□ 0.16
PRIM1-204ENST00000549549 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
PRIM1-204ENST00000549549 SULF1Q8IWU6 871 aa16.01■□□□□ 0.15
PRIM1-204ENST00000549549 GDPD2Q9HCC8 539 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms