RNA–Protein interactions for RNA: ENST00000549457.1

NOP56P3-201, Transcript of NOP56 ribonucleoprotein pseudogene 3, humanhuman

BASIC

Gene NOP56P3, Length 385 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56P3-201ENST00000549457 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
NOP56P3-201ENST00000549457 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
NOP56P3-201ENST00000549457 PLEKHG3A1L390 1219 aa10.29□□□□□ -0.76
NOP56P3-201ENST00000549457 CLCN1P35523 988 aa10.29□□□□□ -0.76
NOP56P3-201ENST00000549457 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
NOP56P3-201ENST00000549457 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
NOP56P3-201ENST00000549457 RIMBP2O15034 1052 aa10.26□□□□□ -0.77
NOP56P3-201ENST00000549457 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
NOP56P3-201ENST00000549457 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
NOP56P3-201ENST00000549457 OATP04181 439 aa10.25□□□□□ -0.77
NOP56P3-201ENST00000549457 FOSBP53539 338 aa10.25□□□□□ -0.77
NOP56P3-201ENST00000549457 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
NOP56P3-201ENST00000549457 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
NOP56P3-201ENST00000549457 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
NOP56P3-201ENST00000549457 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
NOP56P3-201ENST00000549457 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
NOP56P3-201ENST00000549457 MS4A1P11836 297 aa10.21□□□□□ -0.77
NOP56P3-201ENST00000549457 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.77
NOP56P3-201ENST00000549457 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
NOP56P3-201ENST00000549457 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
NOP56P3-201ENST00000549457 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
NOP56P3-201ENST00000549457 FLIIQ13045 1269 aa10.2□□□□□ -0.78
NOP56P3-201ENST00000549457 ZMYND15Q9H091 742 aa10.2□□□□□ -0.78
NOP56P3-201ENST00000549457 METTL3Q86U44 580 aaKnown RBP10.19□□□□□ -0.78
NOP56P3-201ENST00000549457 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
NOP56P3-201ENST00000549457 RSPH6AQ9H0K4 717 aa10.19□□□□□ -0.78
NOP56P3-201ENST00000549457 NUDT7P0C024 238 aa10.18□□□□□ -0.78
NOP56P3-201ENST00000549457 PADI6Q6TGC4 694 aa10.18□□□□□ -0.78
NOP56P3-201ENST00000549457 PSDA5PKW4 1024 aaPredicted RBP10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 SUPT5HO00267 1087 aaKnown RBP10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 SSTR3P32745 418 aaPredicted RBP10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 SCUBE2Q9NQ36 999 aa10.17□□□□□ -0.78
NOP56P3-201ENST00000549457 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
NOP56P3-201ENST00000549457 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
NOP56P3-201ENST00000549457 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
NOP56P3-201ENST00000549457 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
NOP56P3-201ENST00000549457 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
NOP56P3-201ENST00000549457 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
NOP56P3-201ENST00000549457 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
NOP56P3-201ENST00000549457 ADAM33Q9BZ11 813 aa10.15□□□□□ -0.78
NOP56P3-201ENST00000549457 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
NOP56P3-201ENST00000549457 PRSS12P56730 875 aa10.14□□□□□ -0.79
NOP56P3-201ENST00000549457 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
NOP56P3-201ENST00000549457 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
NOP56P3-201ENST00000549457 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
NOP56P3-201ENST00000549457 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
NOP56P3-201ENST00000549457 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
NOP56P3-201ENST00000549457 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
NOP56P3-201ENST00000549457 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
NOP56P3-201ENST00000549457 FAM161AQ3B820 660 aa10.11□□□□□ -0.79
NOP56P3-201ENST00000549457 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.79
NOP56P3-201ENST00000549457 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
NOP56P3-201ENST00000549457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
NOP56P3-201ENST00000549457 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
NOP56P3-201ENST00000549457 SNPHO15079 494 aa10.08□□□□□ -0.8
NOP56P3-201ENST00000549457 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
NOP56P3-201ENST00000549457 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
NOP56P3-201ENST00000549457 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
NOP56P3-201ENST00000549457 PTPREP23469 700 aa10.07□□□□□ -0.8
NOP56P3-201ENST00000549457 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
NOP56P3-201ENST00000549457 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
NOP56P3-201ENST00000549457 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
NOP56P3-201ENST00000549457 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
NOP56P3-201ENST00000549457 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
NOP56P3-201ENST00000549457 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
NOP56P3-201ENST00000549457 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
NOP56P3-201ENST00000549457 COL9A1P20849 921 aa10.02□□□□□ -0.81
NOP56P3-201ENST00000549457 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
NOP56P3-201ENST00000549457 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
NOP56P3-201ENST00000549457 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
NOP56P3-201ENST00000549457 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 DNAJB2P25686 324 aa10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 PACS2Q86VP3 889 aa10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 EYA1Q99502 592 aa10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 POLR3EQ9NVU0 708 aa10.01□□□□□ -0.81
NOP56P3-201ENST00000549457 A6NJR5 290 aa10□□□□□ -0.81
NOP56P3-201ENST00000549457 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
NOP56P3-201ENST00000549457 MCM6Q14566 821 aa10□□□□□ -0.81
NOP56P3-201ENST00000549457 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 NUDT18Q6ZVK8 323 aa9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 PROCA1Q8NCQ7 364 aaPredicted RBP9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 FAM198AQ9UFP1 575 aa9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
NOP56P3-201ENST00000549457 CD46P15529 392 aa9.97□□□□□ -0.81
NOP56P3-201ENST00000549457 TATDN2Q93075 761 aa9.97□□□□□ -0.81
NOP56P3-201ENST00000549457 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
NOP56P3-201ENST00000549457 TMEM134Q9H6X4 195 aa9.96□□□□□ -0.82
NOP56P3-201ENST00000549457 NUTM1Q86Y26 1132 aa9.95□□□□□ -0.82
NOP56P3-201ENST00000549457 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
NOP56P3-201ENST00000549457 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
NOP56P3-201ENST00000549457 RAD21O60216 631 aa9.94□□□□□ -0.82
NOP56P3-201ENST00000549457 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
NOP56P3-201ENST00000549457 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
NOP56P3-201ENST00000549457 SPDYE5A6NIY4 337 aa9.93□□□□□ -0.82
NOP56P3-201ENST00000549457 TMEM259Q4ZIN3 620 aa9.93□□□□□ -0.82
NOP56P3-201ENST00000549457 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms