RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
TSPAN8-204ENST00000549421 DCBLD2Q96PD2 775 aa7.46□□□□□ -1.22
TSPAN8-204ENST00000549421 RBM27Q9P2N5 1060 aaKnown RBP7.46□□□□□ -1.22
TSPAN8-204ENST00000549421 MS4A1P11836 297 aa7.45□□□□□ -1.22
TSPAN8-204ENST00000549421 UBTFP17480 764 aaKnown RBP7.45□□□□□ -1.22
TSPAN8-204ENST00000549421 JPH4Q96JJ6 628 aa7.44□□□□□ -1.22
TSPAN8-204ENST00000549421 NPDC1Q9NQX5 325 aaPredicted RBP7.44□□□□□ -1.22
TSPAN8-204ENST00000549421 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
TSPAN8-204ENST00000549421 PRIM1P49642 420 aaKnown RBP7.43□□□□□ -1.22
TSPAN8-204ENST00000549421 APBB1O00213 710 aa7.42□□□□□ -1.22
TSPAN8-204ENST00000549421 RAD21O60216 631 aa7.42□□□□□ -1.22
TSPAN8-204ENST00000549421 MDM2Q00987 491 aaPredicted RBP7.42□□□□□ -1.22
TSPAN8-204ENST00000549421 MCM6Q14566 821 aa7.41□□□□□ -1.22
TSPAN8-204ENST00000549421 CDHR5Q9HBB8 845 aa7.41□□□□□ -1.22
TSPAN8-204ENST00000549421 PCDHGA10Q9Y5H3 936 aa7.41□□□□□ -1.22
TSPAN8-204ENST00000549421 TRAK2O60296 914 aa7.4□□□□□ -1.22
TSPAN8-204ENST00000549421 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.22
TSPAN8-204ENST00000549421 FAM217BQ9NTX9 383 aaPredicted RBP7.4□□□□□ -1.22
TSPAN8-204ENST00000549421 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.4□□□□□ -1.22
TSPAN8-204ENST00000549421 COLQQ9Y215 455 aaPredicted RBP7.4□□□□□ -1.22
TSPAN8-204ENST00000549421 GABBR2O75899 941 aa7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 BEGAINQ9BUH8 593 aa7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 PCDHGA4Q9Y5G9 962 aa7.39□□□□□ -1.23
TSPAN8-204ENST00000549421 SPDYE5A6NIY4 337 aa7.38□□□□□ -1.23
TSPAN8-204ENST00000549421 RBM46Q8TBY0 533 aaKnown RBP7.38□□□□□ -1.23
TSPAN8-204ENST00000549421 RBM33Q96EV2 1170 aaKnown RBP7.38□□□□□ -1.23
TSPAN8-204ENST00000549421 EVX2Q03828 476 aa7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 PROSER2Q86WR7 435 aaPredicted RBP7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 PXYLP1Q8TE99 480 aa7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 ARID3AQ99856 593 aa7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 C1orf115Q9H7X2 142 aa7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 METRNQ9UJH8 293 aa7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 ATP1B4Q9UN42 357 aaPredicted RBP7.37□□□□□ -1.23
TSPAN8-204ENST00000549421 SOCS7O14512 581 aa7.36□□□□□ -1.23
TSPAN8-204ENST00000549421 CLK2P49760 499 aaKnown RBP7.36□□□□□ -1.23
TSPAN8-204ENST00000549421 FOSBP53539 338 aa7.36□□□□□ -1.23
TSPAN8-204ENST00000549421 ZDHHC16Q969W1 377 aa7.36□□□□□ -1.23
TSPAN8-204ENST00000549421 ADGRG1Q9Y653 693 aa7.36□□□□□ -1.23
TSPAN8-204ENST00000549421 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 TUSC1Q2TAM9 212 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 TMEM259Q4ZIN3 620 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 WWC1Q8IX03 1113 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 TTC13Q8NBP0 860 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 SERPINA10Q9UK55 444 aa7.35□□□□□ -1.23
TSPAN8-204ENST00000549421 RIMBP2O15034 1052 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 PDIA4P13667 645 aaKnown RBP7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 PADI6Q6TGC4 694 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 PELP1Q8IZL8 1130 aaKnown RBP7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 CLUAP1Q96AJ1 413 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
TSPAN8-204ENST00000549421 KDM4FA0A1W2PPD8 638 aa7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 PSDA5PKW4 1024 aaPredicted RBP7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 ARID3CA6NKF2 412 aa7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 DOK7Q18PE1 504 aa7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 MYSM1Q5VVJ2 828 aa7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
TSPAN8-204ENST00000549421 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
TSPAN8-204ENST00000549421 POTEFA5A3E0 1075 aa7.32□□□□□ -1.24
TSPAN8-204ENST00000549421 PRSS12P56730 875 aa7.32□□□□□ -1.24
TSPAN8-204ENST00000549421 CCDC82Q8N4S0 544 aa7.32□□□□□ -1.24
TSPAN8-204ENST00000549421 GJA5P36382 358 aa7.31□□□□□ -1.24
TSPAN8-204ENST00000549421 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
TSPAN8-204ENST00000549421 PPP2R2DQ66LE6 453 aa7.31□□□□□ -1.24
TSPAN8-204ENST00000549421 ZNF454Q8N9F8 522 aa7.31□□□□□ -1.24
TSPAN8-204ENST00000549421 FNBP4Q8N3X1 1017 aaPredicted RBP7.3□□□□□ -1.24
TSPAN8-204ENST00000549421 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
TSPAN8-204ENST00000549421 POLR3EQ9NVU0 708 aa7.3□□□□□ -1.24
TSPAN8-204ENST00000549421 RFC5P40937 340 aa7.29□□□□□ -1.24
TSPAN8-204ENST00000549421 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
TSPAN8-204ENST00000549421 PDE4CQ08493 712 aa7.28□□□□□ -1.24
TSPAN8-204ENST00000549421 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
TSPAN8-204ENST00000549421 NBPF26B4DH59 902 aa7.27□□□□□ -1.25
TSPAN8-204ENST00000549421 TRIM26Q12899 539 aaPredicted RBP7.27□□□□□ -1.25
TSPAN8-204ENST00000549421 PPP4R3BQ5MIZ7 849 aa7.27□□□□□ -1.25
TSPAN8-204ENST00000549421 NUTM1Q86Y26 1132 aa7.27□□□□□ -1.25
TSPAN8-204ENST00000549421 RSPH4AQ5TD94 716 aa7.26□□□□□ -1.25
TSPAN8-204ENST00000549421 RIC3Q7Z5B4 369 aa7.26□□□□□ -1.25
TSPAN8-204ENST00000549421 COG6Q9Y2V7 657 aa7.26□□□□□ -1.25
TSPAN8-204ENST00000549421 SPTLC1O15269 473 aa7.25□□□□□ -1.25
TSPAN8-204ENST00000549421 CD46P15529 392 aa7.25□□□□□ -1.25
TSPAN8-204ENST00000549421 DNAJB2P25686 324 aa7.25□□□□□ -1.25
TSPAN8-204ENST00000549421 KCTD17Q8N5Z5 321 aa7.25□□□□□ -1.25
TSPAN8-204ENST00000549421 PPP1R3GB7ZBB8 358 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 FAM161AQ3B820 660 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 SPIRE2Q8WWL2 714 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 TRAIPQ9BWF2 469 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 ADAM33Q9BZ11 813 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 BCL2L12Q9HB09 334 aa7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 ZNF777Q9ULD5 760 aaPredicted RBP7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 ZNF330Q9Y3S2 320 aaPredicted RBP7.24□□□□□ -1.25
TSPAN8-204ENST00000549421 RCCD1A6NED2 376 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms