RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 NAIPQ13075 1403 aa14.58□□□□□ -0.07
SMARCD1-206ENST00000549274 FAM135AQ9P2D6 1515 aa14.58□□□□□ -0.08
SMARCD1-206ENST00000549274 HRCP23327 699 aa14.58□□□□□ -0.08
SMARCD1-206ENST00000549274 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
SMARCD1-206ENST00000549274 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
SMARCD1-206ENST00000549274 RNF17Q9BXT8 1623 aaKnown RBP14.55□□□□□ -0.08
SMARCD1-206ENST00000549274 DEPDC5O75140 1603 aa14.53□□□□□ -0.08
SMARCD1-206ENST00000549274 KANK1Q14678 1352 aa14.53□□□□□ -0.08
SMARCD1-206ENST00000549274 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.09
SMARCD1-206ENST00000549274 UNC13BO14795 1591 aa14.51□□□□□ -0.09
SMARCD1-206ENST00000549274 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-206ENST00000549274 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
SMARCD1-206ENST00000549274 KIF3BO15066 747 aa14.5□□□□□ -0.09
SMARCD1-206ENST00000549274 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
SMARCD1-206ENST00000549274 RAB3GAP2Q9H2M9 1393 aa14.49□□□□□ -0.09
SMARCD1-206ENST00000549274 ADRA2BP18089 450 aa14.49□□□□□ -0.09
SMARCD1-206ENST00000549274 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
SMARCD1-206ENST00000549274 CNTLNQ9NXG0 1405 aa14.48□□□□□ -0.09
SMARCD1-206ENST00000549274 ESF1Q9H501 851 aaKnown RBP14.47□□□□□ -0.09
SMARCD1-206ENST00000549274 IQGAP3Q86VI3 1631 aa14.46□□□□□ -0.09
SMARCD1-206ENST00000549274 GGT6Q6P531 493 aa14.44□□□□□ -0.1
SMARCD1-206ENST00000549274 MROH2AA6NES4 1674 aa14.44□□□□□ -0.1
SMARCD1-206ENST00000549274 LMTK2Q8IWU2 1503 aa14.44□□□□□ -0.1
SMARCD1-206ENST00000549274 VWDEQ8N2E2 1590 aa14.43□□□□□ -0.1
SMARCD1-206ENST00000549274 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
SMARCD1-206ENST00000549274 MROH1Q8NDA8 1641 aa14.43□□□□□ -0.1
SMARCD1-206ENST00000549274 NUP155O75694 1391 aa14.43□□□□□ -0.1
SMARCD1-206ENST00000549274 TET3O43151 1660 aa14.42□□□□□ -0.1
SMARCD1-206ENST00000549274 FER1L4A9Z1Z3 1794 aa14.42□□□□□ -0.1
SMARCD1-206ENST00000549274 SIGLEC1Q9BZZ2 1709 aa14.42□□□□□ -0.1
SMARCD1-206ENST00000549274 WASHC2CQ9Y4E1 1318 aa14.41□□□□□ -0.1
SMARCD1-206ENST00000549274 RPRD2Q5VT52 1461 aaKnown RBP14.4□□□□□ -0.1
SMARCD1-206ENST00000549274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.14e-7■■□□□ 13.9
SMARCD1-206ENST00000549274 ABCC3O15438 1527 aa14.4□□□□□ -0.1
SMARCD1-206ENST00000549274 CEP152O94986 1710 aa14.39□□□□□ -0.11
SMARCD1-206ENST00000549274 ARHGAP31Q2M1Z3 1444 aa14.39□□□□□ -0.11
SMARCD1-206ENST00000549274 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
SMARCD1-206ENST00000549274 CAMSAP1Q5T5Y3 1602 aa14.38□□□□□ -0.11
SMARCD1-206ENST00000549274 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
SMARCD1-206ENST00000549274 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
SMARCD1-206ENST00000549274 CLTCQ00610 1675 aaKnown RBP14.38□□□□□ -0.11
SMARCD1-206ENST00000549274 MLECQ14165 292 aa14.37□□□□□ -0.11
SMARCD1-206ENST00000549274 PZPP20742 1482 aa14.36□□□□□ -0.11
SMARCD1-206ENST00000549274 MADDQ8WXG6 1647 aa14.34□□□□□ -0.11
SMARCD1-206ENST00000549274 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
SMARCD1-206ENST00000549274 CLSPNQ9HAW4 1339 aa14.33□□□□□ -0.12
SMARCD1-206ENST00000549274 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.12
SMARCD1-206ENST00000549274 E9PCH4 1651 aa14.32□□□□□ -0.12
SMARCD1-206ENST00000549274 SETD1BQ9UPS6 1966 aaKnown RBP14.31□□□□□ -0.12
SMARCD1-206ENST00000549274 SPHKAPQ2M3C7 1700 aa14.31□□□□□ -0.12
SMARCD1-206ENST00000549274 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
SMARCD1-206ENST00000549274 C3P01024 1663 aa14.3□□□□□ -0.12
SMARCD1-206ENST00000549274 PKD2Q13563 968 aa14.3□□□□□ -0.12
SMARCD1-206ENST00000549274 NPATQ14207 1427 aa14.3□□□□□ -0.12
SMARCD1-206ENST00000549274 PREX1Q8TCU6 1659 aa14.29□□□□□ -0.12
SMARCD1-206ENST00000549274 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
SMARCD1-206ENST00000549274 SPATA31D1Q6ZQQ2 1576 aa14.27□□□□□ -0.12
SMARCD1-206ENST00000549274 CFAP65Q6ZU64 1925 aaKnown RBP14.27□□□□□ -0.13
SMARCD1-206ENST00000549274 TRPM2O94759 1503 aa14.26□□□□□ -0.13
SMARCD1-206ENST00000549274 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
SMARCD1-206ENST00000549274 PTPRTO14522 1441 aa14.26□□□□□ -0.13
SMARCD1-206ENST00000549274 PTPRMP28827 1452 aa14.25□□□□□ -0.13
SMARCD1-206ENST00000549274 NOS1P29475 1434 aa14.25□□□□□ -0.13
SMARCD1-206ENST00000549274 KCNA4P22459 653 aa14.25□□□□□ -0.13
SMARCD1-206ENST00000549274 SLC52A1Q9NWF4 448 aa14.25□□□□□ -0.13
SMARCD1-206ENST00000549274 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
SMARCD1-206ENST00000549274 CCER1Q8TC90 406 aaPredicted RBP14.24□□□□□ -0.13
SMARCD1-206ENST00000549274 NLRP1Q9C000 1473 aa14.24□□□□□ -0.13
SMARCD1-206ENST00000549274 KDM5AP29375 1690 aaKnown RBP14.23□□□□□ -0.13
SMARCD1-206ENST00000549274 TNRQ92752 1358 aa14.22□□□□□ -0.13
SMARCD1-206ENST00000549274 KIF1BO60333 1816 aa14.22□□□□□ -0.13
SMARCD1-206ENST00000549274 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
SMARCD1-206ENST00000549274 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
SMARCD1-206ENST00000549274 PIK3C2BO00750 1634 aa14.2□□□□□ -0.14
SMARCD1-206ENST00000549274 SYNMO15061 1565 aa14.19□□□□□ -0.14
SMARCD1-206ENST00000549274 KDM4FA0A1W2PPD8 638 aa14.19□□□□□ -0.14
SMARCD1-206ENST00000549274 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
SMARCD1-206ENST00000549274 MYO3AQ8NEV4 1616 aa14.18□□□□□ -0.14
SMARCD1-206ENST00000549274 UHRF1BP1Q6BDS2 1440 aa14.17□□□□□ -0.14
SMARCD1-206ENST00000549274 CLTCL1P53675 1640 aa14.17□□□□□ -0.14
SMARCD1-206ENST00000549274 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
SMARCD1-206ENST00000549274 STAC3Q96MF2 364 aa14.16□□□□□ -0.14
SMARCD1-206ENST00000549274 PLA2R1Q13018 1463 aa14.16□□□□□ -0.14
SMARCD1-206ENST00000549274 ADGRB3O60242 1522 aa14.15□□□□□ -0.14
SMARCD1-206ENST00000549274 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
SMARCD1-206ENST00000549274 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
SMARCD1-206ENST00000549274 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
SMARCD1-206ENST00000549274 CEP170BQ9Y4F5 1589 aaPredicted RBP14.14□□□□□ -0.15
SMARCD1-206ENST00000549274 CEBPAP49715 358 aaPredicted RBP14.14□□□□□ -0.15
SMARCD1-206ENST00000549274 HDGFP51858 240 aaKnown RBP14.14□□□□□ -0.15
SMARCD1-206ENST00000549274 UGGT1Q9NYU2 1555 aa14.13□□□□□ -0.15
SMARCD1-206ENST00000549274 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 IDI1Q13907 227 aa14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 RPGRIP1LQ68CZ1 1315 aa14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 TMEM131LA2VDJ0 1609 aa14.12□□□□□ -0.15
SMARCD1-206ENST00000549274 TONSLQ96HA7 1378 aa14.1□□□□□ -0.15
SMARCD1-206ENST00000549274 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-206ENST00000549274 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms