RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 ILDR1Q86SU0 546 aaPredicted RBP28.65■■■□□ 2.18
BRF1-214ENST00000549044 NCOA1Q15788 1441 aa28.64■■■□□ 2.18
BRF1-214ENST00000549044 ANKRD30AQ9BXX3 1397 aa28.63■■■□□ 2.17
BRF1-214ENST00000549044 ADGRL2O95490 1459 aa28.62■■■□□ 2.17
BRF1-214ENST00000549044 HSPA2P54652 639 aa28.62■■■□□ 2.17
BRF1-214ENST00000549044 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
BRF1-214ENST00000549044 EIF2AK4Q9P2K8 1649 aaKnown RBP28.61■■■□□ 2.17
BRF1-214ENST00000549044 MROH1Q8NDA8 1641 aa28.6■■■□□ 2.17
BRF1-214ENST00000549044 ERBINQ96RT1 1412 aa28.59■■■□□ 2.17
BRF1-214ENST00000549044 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
BRF1-214ENST00000549044 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.17
BRF1-214ENST00000549044 ITGAEP38570 1179 aa28.56■■■□□ 2.16
BRF1-214ENST00000549044 PREX1Q8TCU6 1659 aa28.56■■■□□ 2.16
BRF1-214ENST00000549044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.56■■■□□ 2.165e-6■■■■■ 46.2
BRF1-214ENST00000549044 RRBP1Q9P2E9 1410 aaKnown RBP28.55■■■□□ 2.16
BRF1-214ENST00000549044 NPATQ14207 1427 aa28.54■■■□□ 2.16
BRF1-214ENST00000549044 UHRF1BP1Q6BDS2 1440 aa28.53■■■□□ 2.16
BRF1-214ENST00000549044 ABCC3O15438 1527 aa28.53■■■□□ 2.16
BRF1-214ENST00000549044 FAM135AQ9P2D6 1515 aa28.53■■■□□ 2.16
BRF1-214ENST00000549044 FBXO31Q5XUX0 539 aaPredicted RBP28.52■■■□□ 2.16
BRF1-214ENST00000549044 SETD1BQ9UPS6 1966 aaKnown RBP28.5■■■□□ 2.15
BRF1-214ENST00000549044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.49■■■□□ 2.151e-6■□□□□ 10.4
BRF1-214ENST00000549044 PRDM15P57071 1507 aaPredicted RBP28.48■■■□□ 2.15
BRF1-214ENST00000549044 PZPP20742 1482 aa28.47■■■□□ 2.15
BRF1-214ENST00000549044 ROCK1Q13464 1354 aa28.47■■■□□ 2.15
BRF1-214ENST00000549044 ANKRD50Q9ULJ7 1429 aa28.46■■■□□ 2.15
BRF1-214ENST00000549044 DEPDC5O75140 1603 aa28.46■■■□□ 2.15
BRF1-214ENST00000549044 CEP152O94986 1710 aa28.44■■■□□ 2.14
BRF1-214ENST00000549044 ZC3H13Q5T200 1668 aaKnown RBP28.43■■■□□ 2.14
BRF1-214ENST00000549044 MYO3AQ8NEV4 1616 aa28.4■■■□□ 2.14
BRF1-214ENST00000549044 TNRQ92752 1358 aa28.39■■■□□ 2.14
BRF1-214ENST00000549044 CAMSAP1Q5T5Y3 1602 aa28.39■■■□□ 2.13
BRF1-214ENST00000549044 VWDEQ8N2E2 1590 aa28.38■■■□□ 2.13
BRF1-214ENST00000549044 KANK1Q14678 1352 aa28.36■■■□□ 2.13
BRF1-214ENST00000549044 CEP170BQ9Y4F5 1589 aaPredicted RBP28.34■■■□□ 2.13
BRF1-214ENST00000549044 ERVK-7P63135 1459 aa28.34■■■□□ 2.13
BRF1-214ENST00000549044 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
BRF1-214ENST00000549044 ARHGAP31Q2M1Z3 1444 aa28.32■■■□□ 2.12
BRF1-214ENST00000549044 LMTK2Q8IWU2 1503 aa28.32■■■□□ 2.12
BRF1-214ENST00000549044 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
BRF1-214ENST00000549044 SPATA31D1Q6ZQQ2 1576 aa28.31■■■□□ 2.12
BRF1-214ENST00000549044 STRCQ7RTU9 1775 aa28.31■■■□□ 2.12
BRF1-214ENST00000549044 UNC13BO14795 1591 aa28.28■■■□□ 2.12
BRF1-214ENST00000549044 NAIPQ13075 1403 aa28.26■■■□□ 2.11
BRF1-214ENST00000549044 CFAP65Q6ZU64 1925 aaKnown RBP28.26■■■□□ 2.11
BRF1-214ENST00000549044 NLRP1Q9C000 1473 aa28.24■■■□□ 2.11
BRF1-214ENST00000549044 EFCAB6Q5THR3 1501 aa28.23■■■□□ 2.11
BRF1-214ENST00000549044 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
BRF1-214ENST00000549044 NUP155O75694 1391 aa28.18■■■□□ 2.1
BRF1-214ENST00000549044 PLA2R1Q13018 1463 aa28.18■■■□□ 2.1
BRF1-214ENST00000549044 UGGT1Q9NYU2 1555 aa28.17■■■□□ 2.1
BRF1-214ENST00000549044 HFM1A2PYH4 1435 aa28.17■■■□□ 2.1
BRF1-214ENST00000549044 TET3O43151 1660 aa28.16■■■□□ 2.1
BRF1-214ENST00000549044 GCC2Q8IWJ2 1684 aa28.16■■■□□ 2.1
BRF1-214ENST00000549044 NOS1P29475 1434 aa28.16■■■□□ 2.1
BRF1-214ENST00000549044 IQGAP3Q86VI3 1631 aa28.15■■■□□ 2.1
BRF1-214ENST00000549044 SYNMO15061 1565 aa28.15■■■□□ 2.1
BRF1-214ENST00000549044 PTPRTO14522 1441 aa28.14■■■□□ 2.1
BRF1-214ENST00000549044 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
BRF1-214ENST00000549044 THEMISQ8N1K5 641 aaPredicted RBP28.12■■■□□ 2.09
BRF1-214ENST00000549044 RPRD2Q5VT52 1461 aaKnown RBP28.11■■■□□ 2.09
BRF1-214ENST00000549044 PKD2Q13563 968 aa28.1■■■□□ 2.09
BRF1-214ENST00000549044 IDI1Q13907 227 aa28.1■■■□□ 2.09
BRF1-214ENST00000549044 E9PCH4 1651 aa28.09■■■□□ 2.09
BRF1-214ENST00000549044 PIK3C2BO00750 1634 aa28.07■■■□□ 2.08
BRF1-214ENST00000549044 UBR1Q8IWV7 1749 aa28.07■■■□□ 2.08
BRF1-214ENST00000549044 NEURL4Q96JN8 1562 aa28.05■■■□□ 2.08
BRF1-214ENST00000549044 ANKLE2Q86XL3 938 aa28.03■■■□□ 2.08
BRF1-214ENST00000549044 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
BRF1-214ENST00000549044 TRIM52Q96A61 297 aa28■■■□□ 2.07
BRF1-214ENST00000549044 SLC52A1Q9NWF4 448 aa27.99■■■□□ 2.07
BRF1-214ENST00000549044 ARHGAP23Q9P227 1491 aa27.98■■■□□ 2.07
BRF1-214ENST00000549044 LTKP29376 864 aa27.97■■■□□ 2.07
BRF1-214ENST00000549044 STAG3Q9UJ98 1225 aa27.97■■■□□ 2.07
BRF1-214ENST00000549044 SLIT1O75093 1534 aa27.96■■■□□ 2.07
BRF1-214ENST00000549044 ADGRB3O60242 1522 aa27.95■■■□□ 2.06
BRF1-214ENST00000549044 MED14O60244 1454 aa27.95■■■□□ 2.06
BRF1-214ENST00000549044 ZNF335Q9H4Z2 1342 aaPredicted RBP27.94■■■□□ 2.06
BRF1-214ENST00000549044 NPHP4O75161 1426 aaPredicted RBP27.94■■■□□ 2.06
BRF1-214ENST00000549044 TMEM2Q9UHN6 1383 aa27.94■■■□□ 2.06
BRF1-214ENST00000549044 LTBP4Q8N2S1 1624 aa27.92■■■□□ 2.06
BRF1-214ENST00000549044 SCAF11Q99590 1463 aaKnown RBP27.92■■■□□ 2.06
BRF1-214ENST00000549044 TXNDC2Q86VQ3 553 aa27.92■■■□□ 2.06
BRF1-214ENST00000549044 CERKQ8TCT0 537 aa27.92■■■□□ 2.06
BRF1-214ENST00000549044 KDM5AP29375 1690 aaKnown RBP27.91■■■□□ 2.06
BRF1-214ENST00000549044 SETD5Q9C0A6 1442 aa27.9■■■□□ 2.06
BRF1-214ENST00000549044 SLC4A1APQ9BWU0 796 aaKnown RBP27.89■■■□□ 2.06
BRF1-214ENST00000549044 TMEM131LA2VDJ0 1609 aa27.88■■■□□ 2.05
BRF1-214ENST00000549044 CHGAP10645 457 aaKnown RBP27.87■■■□□ 2.05
BRF1-214ENST00000549044 SPHKAPQ2M3C7 1700 aa27.87■■■□□ 2.05
BRF1-214ENST00000549044 IQGAP1P46940 1657 aa27.86■■■□□ 2.05
BRF1-214ENST00000549044 EID1Q9Y6B2 187 aa27.85■■■□□ 2.05
BRF1-214ENST00000549044 MYO5BQ9ULV0 1848 aa27.85■■■□□ 2.05
BRF1-214ENST00000549044 RAB3GAP2Q9H2M9 1393 aa27.84■■■□□ 2.05
BRF1-214ENST00000549044 FOXD1Q16676 465 aa27.83■■■□□ 2.05
BRF1-214ENST00000549044 ZFYVE9O95405 1425 aa27.82■■■□□ 2.04
BRF1-214ENST00000549044 FBXO41Q8TF61 875 aa27.8■■■□□ 2.04
BRF1-214ENST00000549044 RIMS2Q9UQ26 1411 aa27.8■■■□□ 2.04
BRF1-214ENST00000549044 TRPM2O94759 1503 aa27.8■■■□□ 2.04
BRF1-214ENST00000549044 CLTCL1P53675 1640 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms