RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
BEST3-209ENST00000548658 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
BEST3-209ENST00000548658 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
BEST3-209ENST00000548658 KDM5DQ9BY66 1539 aa17.65■□□□□ 0.42
BEST3-209ENST00000548658 SHANK2Q9UPX8 1470 aa17.64■□□□□ 0.41
BEST3-209ENST00000548658 ABCC5O15440 1437 aa17.64■□□□□ 0.41
BEST3-209ENST00000548658 MSH5O43196 834 aa17.63■□□□□ 0.41
BEST3-209ENST00000548658 STRCQ7RTU9 1775 aa17.63■□□□□ 0.41
BEST3-209ENST00000548658 PTPRTO14522 1441 aa17.63■□□□□ 0.41
BEST3-209ENST00000548658 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
BEST3-209ENST00000548658 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
BEST3-209ENST00000548658 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
BEST3-209ENST00000548658 DAPK1P53355 1430 aa17.61■□□□□ 0.41
BEST3-209ENST00000548658 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
BEST3-209ENST00000548658 PZPP20742 1482 aa17.61■□□□□ 0.41
BEST3-209ENST00000548658 PKD2Q13563 968 aa17.6■□□□□ 0.41
BEST3-209ENST00000548658 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
BEST3-209ENST00000548658 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
BEST3-209ENST00000548658 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
BEST3-209ENST00000548658 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
BEST3-209ENST00000548658 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
BEST3-209ENST00000548658 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
BEST3-209ENST00000548658 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.41
BEST3-209ENST00000548658 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
BEST3-209ENST00000548658 RNF17Q9BXT8 1623 aaKnown RBP17.58■□□□□ 0.41
BEST3-209ENST00000548658 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.41
BEST3-209ENST00000548658 TNRQ92752 1358 aa17.58■□□□□ 0.4
BEST3-209ENST00000548658 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
BEST3-209ENST00000548658 ERBINQ96RT1 1412 aa17.57■□□□□ 0.4
BEST3-209ENST00000548658 FAM50AQ14320 339 aaKnown RBP17.57■□□□□ 0.4
BEST3-209ENST00000548658 CROCC2H7BZ55 1655 aa17.57■□□□□ 0.4
BEST3-209ENST00000548658 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
BEST3-209ENST00000548658 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
BEST3-209ENST00000548658 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
BEST3-209ENST00000548658 CHIC2Q9UKJ5 165 aa17.55■□□□□ 0.4
BEST3-209ENST00000548658 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
BEST3-209ENST00000548658 NCKAP5LQ9HCH0 1330 aa17.53■□□□□ 0.4
BEST3-209ENST00000548658 ABCC3O15438 1527 aa17.53■□□□□ 0.4
BEST3-209ENST00000548658 NLRP1Q9C000 1473 aa17.53■□□□□ 0.4
BEST3-209ENST00000548658 KANK1Q14678 1352 aa17.53■□□□□ 0.4
BEST3-209ENST00000548658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.39
BEST3-209ENST00000548658 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
BEST3-209ENST00000548658 MROH1Q8NDA8 1641 aa17.49■□□□□ 0.39
BEST3-209ENST00000548658 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
BEST3-209ENST00000548658 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
BEST3-209ENST00000548658 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
BEST3-209ENST00000548658 SPATA31D1Q6ZQQ2 1576 aa17.47■□□□□ 0.39
BEST3-209ENST00000548658 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
BEST3-209ENST00000548658 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
BEST3-209ENST00000548658 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
BEST3-209ENST00000548658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.44■□□□□ 0.38
BEST3-209ENST00000548658 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
BEST3-209ENST00000548658 CEP152O94986 1710 aa17.44■□□□□ 0.38
BEST3-209ENST00000548658 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
BEST3-209ENST00000548658 IQSEC2Q5JU85 1478 aa17.42■□□□□ 0.38
BEST3-209ENST00000548658 LMTK2Q8IWU2 1503 aa17.41■□□□□ 0.38
BEST3-209ENST00000548658 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
BEST3-209ENST00000548658 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
BEST3-209ENST00000548658 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
BEST3-209ENST00000548658 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
BEST3-209ENST00000548658 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
BEST3-209ENST00000548658 VWDEQ8N2E2 1590 aa17.38■□□□□ 0.37
BEST3-209ENST00000548658 MED14O60244 1454 aa17.37■□□□□ 0.37
BEST3-209ENST00000548658 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
BEST3-209ENST00000548658 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
BEST3-209ENST00000548658 ITGAEP38570 1179 aa17.35■□□□□ 0.37
BEST3-209ENST00000548658 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
BEST3-209ENST00000548658 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
BEST3-209ENST00000548658 NEURL4Q96JN8 1562 aa17.35■□□□□ 0.37
BEST3-209ENST00000548658 RPRD2Q5VT52 1461 aaKnown RBP17.34■□□□□ 0.37
BEST3-209ENST00000548658 IDI1Q13907 227 aa17.33■□□□□ 0.36
BEST3-209ENST00000548658 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
BEST3-209ENST00000548658 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
BEST3-209ENST00000548658 EFCAB6Q5THR3 1501 aa17.32■□□□□ 0.36
BEST3-209ENST00000548658 NOS1P29475 1434 aa17.31■□□□□ 0.36
BEST3-209ENST00000548658 CPS1P31327 1500 aa17.31■□□□□ 0.36
BEST3-209ENST00000548658 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
BEST3-209ENST00000548658 SLIT1O75093 1534 aa17.3■□□□□ 0.36
BEST3-209ENST00000548658 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
BEST3-209ENST00000548658 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
BEST3-209ENST00000548658 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
BEST3-209ENST00000548658 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
BEST3-209ENST00000548658 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
BEST3-209ENST00000548658 UBAP1LF5GYI3 381 aa17.28■□□□□ 0.36
BEST3-209ENST00000548658 LTKP29376 864 aa17.28■□□□□ 0.36
BEST3-209ENST00000548658 UNC13BO14795 1591 aa17.28■□□□□ 0.36
BEST3-209ENST00000548658 TET3O43151 1660 aa17.27■□□□□ 0.36
BEST3-209ENST00000548658 PIK3C2BO00750 1634 aa17.27■□□□□ 0.36
BEST3-209ENST00000548658 NUP155O75694 1391 aa17.27■□□□□ 0.35
BEST3-209ENST00000548658 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
BEST3-209ENST00000548658 SYNMO15061 1565 aa17.24■□□□□ 0.35
BEST3-209ENST00000548658 TOM1O60784 492 aa17.24■□□□□ 0.35
BEST3-209ENST00000548658 GCC2Q8IWJ2 1684 aa17.23■□□□□ 0.35
BEST3-209ENST00000548658 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
BEST3-209ENST00000548658 ADGRB3O60242 1522 aa17.21■□□□□ 0.34
BEST3-209ENST00000548658 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
BEST3-209ENST00000548658 BCANQ96GW7 911 aa17.17■□□□□ 0.34
BEST3-209ENST00000548658 E9PCH4 1651 aa17.16■□□□□ 0.34
BEST3-209ENST00000548658 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
BEST3-209ENST00000548658 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms