RNA–Protein interactions for RNA: ENST00000548481.1

CNTN1-206, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-206ENST00000548481 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
CNTN1-206ENST00000548481 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
CNTN1-206ENST00000548481 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
CNTN1-206ENST00000548481 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
CNTN1-206ENST00000548481 EFCAB2Q5VUJ9 269 aa11.45□□□□□ -0.58
CNTN1-206ENST00000548481 AKNAQ7Z591 1439 aa11.44□□□□□ -0.58
CNTN1-206ENST00000548481 KDM6BO15054 1643 aa11.44□□□□□ -0.58
CNTN1-206ENST00000548481 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
CNTN1-206ENST00000548481 FRMPD1Q5SYB0 1578 aa11.42□□□□□ -0.58
CNTN1-206ENST00000548481 ZNF644Q9H582 1327 aaPredicted RBP11.42□□□□□ -0.58
CNTN1-206ENST00000548481 CCDC141Q6ZP82 1450 aa11.42□□□□□ -0.58
CNTN1-206ENST00000548481 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
CNTN1-206ENST00000548481 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
CNTN1-206ENST00000548481 MAST1Q9Y2H9 1570 aa11.41□□□□□ -0.58
CNTN1-206ENST00000548481 ARHGEF12Q9NZN5 1544 aa11.41□□□□□ -0.58
CNTN1-206ENST00000548481 DAPK1P53355 1430 aa11.41□□□□□ -0.58
CNTN1-206ENST00000548481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
CNTN1-206ENST00000548481 KIDINS220Q9ULH0 1771 aa11.4□□□□□ -0.58
CNTN1-206ENST00000548481 SCAPERQ9BY12 1400 aa11.4□□□□□ -0.58
CNTN1-206ENST00000548481 KDM5CP41229 1560 aa11.4□□□□□ -0.58
CNTN1-206ENST00000548481 MBD5Q9P267 1494 aa11.39□□□□□ -0.59
CNTN1-206ENST00000548481 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
CNTN1-206ENST00000548481 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
CNTN1-206ENST00000548481 KIAA1107Q9UPP5 1409 aa11.39□□□□□ -0.59
CNTN1-206ENST00000548481 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
CNTN1-206ENST00000548481 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 SHANK2Q9UPX8 1470 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 PLXNC1O60486 1568 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 POGZQ7Z3K3 1410 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 ITGAEP38570 1179 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNTN1-206ENST00000548481 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 ZFYVE16Q7Z3T8 1539 aa11.38□□□□□ -0.59
CNTN1-206ENST00000548481 ABCC5O15440 1437 aa11.37□□□□□ -0.59
CNTN1-206ENST00000548481 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
CNTN1-206ENST00000548481 ZMYM4Q5VZL5 1548 aa11.37□□□□□ -0.59
CNTN1-206ENST00000548481 ABCA6Q8N139 1617 aa11.37□□□□□ -0.59
CNTN1-206ENST00000548481 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
CNTN1-206ENST00000548481 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
CNTN1-206ENST00000548481 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
CNTN1-206ENST00000548481 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
CNTN1-206ENST00000548481 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
CNTN1-206ENST00000548481 ADGRL2O95490 1459 aa11.33□□□□□ -0.6
CNTN1-206ENST00000548481 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
CNTN1-206ENST00000548481 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
CNTN1-206ENST00000548481 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
CNTN1-206ENST00000548481 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
CNTN1-206ENST00000548481 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
CNTN1-206ENST00000548481 TSPY4P0CV99 314 aa11.31□□□□□ -0.6
CNTN1-206ENST00000548481 TSPY10P0CW01 314 aa11.31□□□□□ -0.6
CNTN1-206ENST00000548481 PROM2Q8N271 834 aa11.31□□□□□ -0.6
CNTN1-206ENST00000548481 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
CNTN1-206ENST00000548481 SPAG9O60271 1321 aaKnown RBP11.31□□□□□ -0.6
CNTN1-206ENST00000548481 MLH3Q9UHC1 1453 aa11.31□□□□□ -0.6
CNTN1-206ENST00000548481 EIF2AK4Q9P2K8 1649 aaKnown RBP11.31□□□□□ -0.6
CNTN1-206ENST00000548481 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
CNTN1-206ENST00000548481 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
CNTN1-206ENST00000548481 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
CNTN1-206ENST00000548481 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
CNTN1-206ENST00000548481 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
CNTN1-206ENST00000548481 DUOX2Q9NRD8 1548 aa11.29□□□□□ -0.6
CNTN1-206ENST00000548481 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
CNTN1-206ENST00000548481 MAGI2Q86UL8 1455 aa11.28□□□□□ -0.6
CNTN1-206ENST00000548481 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
CNTN1-206ENST00000548481 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
CNTN1-206ENST00000548481 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 REREQ9P2R6 1566 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 CEP152O94986 1710 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
CNTN1-206ENST00000548481 UNC13BO14795 1591 aa11.25□□□□□ -0.61
CNTN1-206ENST00000548481 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
CNTN1-206ENST00000548481 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
CNTN1-206ENST00000548481 NAIPQ13075 1403 aa11.25□□□□□ -0.61
CNTN1-206ENST00000548481 A2MP01023 1474 aa11.25□□□□□ -0.61
CNTN1-206ENST00000548481 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
CNTN1-206ENST00000548481 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
CNTN1-206ENST00000548481 ERBINQ96RT1 1412 aa11.23□□□□□ -0.61
CNTN1-206ENST00000548481 SETD5Q9C0A6 1442 aa11.23□□□□□ -0.61
CNTN1-206ENST00000548481 ATP10AO60312 1499 aa11.23□□□□□ -0.61
CNTN1-206ENST00000548481 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
CNTN1-206ENST00000548481 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
CNTN1-206ENST00000548481 MS4A3Q96HJ5 214 aa11.22□□□□□ -0.61
CNTN1-206ENST00000548481 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.61
CNTN1-206ENST00000548481 ZC3H13Q5T200 1668 aaKnown RBP11.21□□□□□ -0.61
CNTN1-206ENST00000548481 ANKRD50Q9ULJ7 1429 aa11.21□□□□□ -0.61
CNTN1-206ENST00000548481 IQGAP3Q86VI3 1631 aa11.2□□□□□ -0.62
CNTN1-206ENST00000548481 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
CNTN1-206ENST00000548481 RAB3GAP2Q9H2M9 1393 aa11.2□□□□□ -0.62
CNTN1-206ENST00000548481 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
CNTN1-206ENST00000548481 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
CNTN1-206ENST00000548481 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
CNTN1-206ENST00000548481 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
CNTN1-206ENST00000548481 AGLP35573 1532 aa11.19□□□□□ -0.62
CNTN1-206ENST00000548481 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
CNTN1-206ENST00000548481 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
CNTN1-206ENST00000548481 TET3O43151 1660 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms