RNA–Protein interactions for RNA: ENST00000548284.1

RARG-208, Transcript of retinoic acid receptor gamma, human

TSL 1 (best)

Gene RARG, Length 556 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARG-208	ENST00000548284	A2ML1	A8K2U0	1454 aa		32.77	■■■□□ 2.84
RARG-208	ENST00000548284	NCOA2	Q15596	1464 aa		32.75	■■■□□ 2.83
RARG-208	ENST00000548284	CAMSAP2	Q08AD1	1489 aa		32.74	■■■□□ 2.83
RARG-208	ENST00000548284	WASHC2C	Q9Y4E1	1318 aa		32.73	■■■□□ 2.83
RARG-208	ENST00000548284	TNR	Q92752	1358 aa		32.72	■■■□□ 2.83
RARG-208	ENST00000548284	TSPY4	P0CV99	314 aa		32.7	■■■□□ 2.83
RARG-208	ENST00000548284	TSPY10	P0CW01	314 aa		32.7	■■■□□ 2.83
RARG-208	ENST00000548284	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.7	■■■□□ 2.83
RARG-208	ENST00000548284	KDM5D	Q9BY66	1539 aa		32.7	■■■□□ 2.83
RARG-208	ENST00000548284	DNMT1	P26358	1616 aa	Known RBP	32.69	■■■□□ 2.82
RARG-208	ENST00000548284	FAM135A	Q9P2D6	1515 aa		32.67	■■■□□ 2.82
RARG-208	ENST00000548284	PZP	P20742	1482 aa		32.66	■■■□□ 2.82
RARG-208	ENST00000548284	ARHGEF5	Q12774	1597 aa		32.59	■■■□□ 2.81
RARG-208	ENST00000548284	ANKLE2	Q86XL3	938 aa		32.59	■■■□□ 2.81
RARG-208	ENST00000548284	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.59	■■■□□ 2.81
RARG-208	ENST00000548284	SCAF1	Q9H7N4	1312 aa	Known RBP	32.58	■■■□□ 2.81
RARG-208	ENST00000548284	POLR1A	O95602	1720 aa	Predicted RBP	32.57	■■■□□ 2.8
RARG-208	ENST00000548284	MIA2	Q96PC5	1412 aa		32.56	■■■□□ 2.8
RARG-208	ENST00000548284	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
RARG-208	ENST00000548284	NLRP1	Q9C000	1473 aa		32.54	■■■□□ 2.8
RARG-208	ENST00000548284	CPS1	P31327	1500 aa		32.53	■■■□□ 2.8
RARG-208	ENST00000548284	TOM1	O60784	492 aa		32.52	■■■□□ 2.8
RARG-208	ENST00000548284	HSPA1L	P34931	641 aa		32.52	■■■□□ 2.8
RARG-208	ENST00000548284	LRRC9	Q6ZRR7	1453 aa		32.52	■■■□□ 2.8
RARG-208	ENST00000548284	NEURL4	Q96JN8	1562 aa		32.52	■■■□□ 2.8
RARG-208	ENST00000548284	SHANK2	Q9UPX8	1470 aa		32.51	■■■□□ 2.79
RARG-208	ENST00000548284	PIP4K2B	P78356	416 aa		32.51	■■■□□ 2.79
RARG-208	ENST00000548284	VPS8	Q8N3P4	1428 aa		32.51	■■■□□ 2.79
RARG-208	ENST00000548284	UGGT1	Q9NYU2	1555 aa		32.5	■■■□□ 2.79
RARG-208	ENST00000548284	MED1	Q15648	1581 aa	Predicted RBP	32.47	■■■□□ 2.79
RARG-208	ENST00000548284	NPHP4	O75161	1426 aa	Predicted RBP	32.45	■■■□□ 2.79
RARG-208	ENST00000548284	MAST1	Q9Y2H9	1570 aa		32.43	■■■□□ 2.78
RARG-208	ENST00000548284	RNF17	Q9BXT8	1623 aa	Known RBP	32.42	■■■□□ 2.78
RARG-208	ENST00000548284	ABCC3	O15438	1527 aa		32.41	■■■□□ 2.78
RARG-208	ENST00000548284	LOC105371045	A0A1W2PR82	267 aa		32.4	■■■□□ 2.78
RARG-208	ENST00000548284	ZC3H13	Q5T200	1668 aa	Known RBP	32.4	■■■□□ 2.78
RARG-208	ENST00000548284	MED14	O60244	1454 aa		32.39	■■■□□ 2.78
RARG-208	ENST00000548284	DEPDC5	O75140	1603 aa		32.38	■■■□□ 2.77
RARG-208	ENST00000548284	KANK4	Q5T7N3	995 aa	Predicted RBP	32.38	■■■□□ 2.77
RARG-208	ENST00000548284	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.37	■■■□□ 2.77
RARG-208	ENST00000548284	VWDE	Q8N2E2	1590 aa		32.37	■■■□□ 2.77
RARG-208	ENST00000548284	MYOM3	Q5VTT5	1437 aa		32.37	■■■□□ 2.77
RARG-208	ENST00000548284	ERVK-7	P63135	1459 aa		32.35	■■■□□ 2.77
RARG-208	ENST00000548284	MAP3K1	Q13233	1512 aa		32.34	■■■□□ 2.77
RARG-208	ENST00000548284	IQGAP1	P46940	1657 aa		32.32	■■■□□ 2.76
RARG-208	ENST00000548284	DUOX2	Q9NRD8	1548 aa		32.31	■■■□□ 2.76
RARG-208	ENST00000548284	ALK	Q9UM73	1620 aa		32.29	■■■□□ 2.76
RARG-208	ENST00000548284	APLP2	Q06481	763 aa		32.27	■■■□□ 2.76
RARG-208	ENST00000548284	MROH1	Q8NDA8	1641 aa		32.26	■■■□□ 2.76
RARG-208	ENST00000548284	CEP152	O94986	1710 aa		32.25	■■■□□ 2.75
RARG-208	ENST00000548284	KIF15	Q9NS87	1388 aa		32.24	■■■□□ 2.75
RARG-208	ENST00000548284	RRP7BP	Q9NSQ0	103 aa		32.23	■■■□□ 2.75
RARG-208	ENST00000548284	PHF23	Q9BUL5	403 aa	Predicted RBP	32.22	■■■□□ 2.75
RARG-208	ENST00000548284	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.21	■■■□□ 2.75
RARG-208	ENST00000548284	ERBIN	Q96RT1	1412 aa		32.19	■■■□□ 2.74
RARG-208	ENST00000548284	SCAF11	Q99590	1463 aa	Known RBP	32.19	■■■□□ 2.74
RARG-208	ENST00000548284	TXNDC2	Q86VQ3	553 aa		32.19	■■■□□ 2.74
RARG-208	ENST00000548284	SENP3	Q9H4L4	574 aa	Predicted RBP	32.19	■■■□□ 2.74
RARG-208	ENST00000548284	LRRC7	Q96NW7	1537 aa		32.19	■■■□□ 2.74
RARG-208	ENST00000548284	CFAP65	Q6ZU64	1925 aa	Known RBP	32.18	■■■□□ 2.74
RARG-208	ENST00000548284	UBR1	Q8IWV7	1749 aa		32.17	■■■□□ 2.74
RARG-208	ENST00000548284	EID1	Q9Y6B2	187 aa		32.17	■■■□□ 2.74
RARG-208	ENST00000548284	ABCC5	O15440	1437 aa		32.17	■■■□□ 2.74
RARG-208	ENST00000548284	SYNM	O15061	1565 aa		32.16	■■■□□ 2.74
RARG-208	ENST00000548284	KANK1	Q14678	1352 aa		32.16	■■■□□ 2.74
RARG-208	ENST00000548284	ARHGAP31	Q2M1Z3	1444 aa		32.16	■■■□□ 2.74
RARG-208	ENST00000548284	PRDM15	P57071	1507 aa	Predicted RBP	32.16	■■■□□ 2.74
RARG-208	ENST00000548284	STAG3	Q9UJ98	1225 aa		32.15	■■■□□ 2.74
RARG-208	ENST00000548284	STRCP1	A6NGW2	1772 aa		32.14	■■■□□ 2.74
RARG-208	ENST00000548284	PTPN23	Q9H3S7	1636 aa		32.13	■■■□□ 2.73
RARG-208	ENST00000548284	LTK	P29376	864 aa		32.12	■■■□□ 2.73
RARG-208	ENST00000548284	CROCC2	H7BZ55	1655 aa		32.11	■■■□□ 2.73
RARG-208	ENST00000548284	DAPK1	P53355	1430 aa		32.1	■■■□□ 2.73
RARG-208	ENST00000548284	SLIT1	O75093	1534 aa		32.1	■■■□□ 2.73
RARG-208	ENST00000548284	ARHGAP23	Q9P227	1491 aa		32.1	■■■□□ 2.73
RARG-208	ENST00000548284	CHIC2	Q9UKJ5	165 aa		32.06	■■■□□ 2.72
RARG-208	ENST00000548284	ANKRD30A	Q9BXX3	1397 aa		32.06	■■■□□ 2.72
RARG-208	ENST00000548284	FGD6	Q6ZV73	1430 aa		32.04	■■■□□ 2.72
RARG-208	ENST00000548284	TMEM2	Q9UHN6	1383 aa		32.03	■■■□□ 2.72
RARG-208	ENST00000548284	PIK3C2B	O00750	1634 aa		32.02	■■■□□ 2.72
RARG-208	ENST00000548284	EFCAB6	Q5THR3	1501 aa		31.97	■■■□□ 2.71
RARG-208	ENST00000548284	IDI1	Q13907	227 aa		31.97	■■■□□ 2.71
RARG-208	ENST00000548284	RGS17	Q9UGC6	210 aa	Predicted RBP	31.96	■■■□□ 2.71
RARG-208	ENST00000548284	LMTK2	Q8IWU2	1503 aa		31.95	■■■□□ 2.7
RARG-208	ENST00000548284	BCAN	Q96GW7	911 aa		31.91	■■■□□ 2.7
RARG-208	ENST00000548284	SLC26A8	Q96RN1	970 aa		31.9	■■■□□ 2.7
RARG-208	ENST00000548284	KDM5A	P29375	1690 aa	Known RBP	31.89	■■■□□ 2.7
RARG-208	ENST00000548284	KCNA6	P17658	529 aa		31.89	■■■□□ 2.7
RARG-208	ENST00000548284	FAM50A	Q14320	339 aa	Known RBP	31.88	■■■□□ 2.69
RARG-208	ENST00000548284	TMEM94	Q12767	1356 aa		31.88	■■■□□ 2.69
RARG-208	ENST00000548284	XIRP1	Q702N8	1843 aa	Known RBP	31.87	■■■□□ 2.69
RARG-208	ENST00000548284	PROSER2	Q86WR7	435 aa	Predicted RBP	31.87	■■■□□ 2.69
RARG-208	ENST00000548284	SLC52A1	Q9NWF4	448 aa		31.86	■■■□□ 2.69
RARG-208	ENST00000548284	NOS1	P29475	1434 aa		31.84	■■■□□ 2.69
RARG-208	ENST00000548284	FAM135B	Q49AJ0	1406 aa		31.83	■■■□□ 2.69
RARG-208	ENST00000548284	ADGRB3	O60242	1522 aa		31.83	■■■□□ 2.69
RARG-208	ENST00000548284	ADGRL2	O95490	1459 aa		31.81	■■■□□ 2.68
RARG-208	ENST00000548284	RBM33	Q96EV2	1170 aa	Known RBP	31.79	■■■□□ 2.68
RARG-208	ENST00000548284	TET3	O43151	1660 aa		31.79	■■■□□ 2.68
RARG-208	ENST00000548284	ANKRD50	Q9ULJ7	1429 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms