RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 DAPK1P53355 1430 aa36.03■■■■□ 3.36
CACNB3-208ENST00000548279 RNF17Q9BXT8 1623 aaKnown RBP36.01■■■■□ 3.36
CACNB3-208ENST00000548279 MYO3AQ8NEV4 1616 aa36■■■■□ 3.35
CACNB3-208ENST00000548279 EIF2AK4Q9P2K8 1649 aaKnown RBP36■■■■□ 3.35
CACNB3-208ENST00000548279 FAM135AQ9P2D6 1515 aa35.99■■■■□ 3.35
CACNB3-208ENST00000548279 DUOX2Q9NRD8 1548 aa35.97■■■■□ 3.35
CACNB3-208ENST00000548279 MROH1Q8NDA8 1641 aa35.97■■■■□ 3.35
CACNB3-208ENST00000548279 ILDR1Q86SU0 546 aaPredicted RBP35.96■■■■□ 3.35
CACNB3-208ENST00000548279 ZNF142P52746 1687 aaPredicted RBP35.94■■■■□ 3.34
CACNB3-208ENST00000548279 KIF15Q9NS87 1388 aa35.93■■■■□ 3.34
CACNB3-208ENST00000548279 WASHC2CQ9Y4E1 1318 aa35.92■■■■□ 3.34
CACNB3-208ENST00000548279 PZPP20742 1482 aa35.9■■■■□ 3.34
CACNB3-208ENST00000548279 CEP170BQ9Y4F5 1589 aaPredicted RBP35.89■■■■□ 3.34
CACNB3-208ENST00000548279 FBXO31Q5XUX0 539 aaPredicted RBP35.89■■■■□ 3.34
CACNB3-208ENST00000548279 RRP7BPQ9NSQ0 103 aa35.89■■■■□ 3.34
CACNB3-208ENST00000548279 ABCC3O15438 1527 aa35.88■■■■□ 3.33
CACNB3-208ENST00000548279 CAMSAP1Q5T5Y3 1602 aa35.87■■■■□ 3.33
CACNB3-208ENST00000548279 NCOA1Q15788 1441 aa35.87■■■■□ 3.33
CACNB3-208ENST00000548279 CHIC2Q9UKJ5 165 aa35.86■■■■□ 3.33
CACNB3-208ENST00000548279 ZC3H13Q5T200 1668 aaKnown RBP35.86■■■■□ 3.33
CACNB3-208ENST00000548279 CEP152O94986 1710 aa35.84■■■■□ 3.33
CACNB3-208ENST00000548279 ERBINQ96RT1 1412 aa35.83■■■■□ 3.33
CACNB3-208ENST00000548279 FAM50AQ14320 339 aaKnown RBP35.83■■■■□ 3.33
CACNB3-208ENST00000548279 TNRQ92752 1358 aa35.8■■■■□ 3.32
CACNB3-208ENST00000548279 PRDM15P57071 1507 aaPredicted RBP35.79■■■■□ 3.32
CACNB3-208ENST00000548279 PPARGC1BQ86YN6 1023 aaKnown RBP35.79■■■■□ 3.32
CACNB3-208ENST00000548279 ANKRD30AQ9BXX3 1397 aa35.78■■■■□ 3.32
CACNB3-208ENST00000548279 A2ML1A8K2U0 1454 aa35.78■■■■□ 3.32
CACNB3-208ENST00000548279 ADGRL2O95490 1459 aa35.78■■■■□ 3.32
CACNB3-208ENST00000548279 PTPRTO14522 1441 aa35.77■■■■□ 3.32
CACNB3-208ENST00000548279 DEPDC5O75140 1603 aa35.76■■■■□ 3.32
CACNB3-208ENST00000548279 DMRT2Q9Y5R5 561 aa35.76■■■■□ 3.32
CACNB3-208ENST00000548279 PLA2R1Q13018 1463 aa35.73■■■■□ 3.31
CACNB3-208ENST00000548279 NCKAP5LQ9HCH0 1330 aa35.71■■■■□ 3.31
CACNB3-208ENST00000548279 SPATA31D1Q6ZQQ2 1576 aa35.7■■■■□ 3.31
CACNB3-208ENST00000548279 ERVK-7P63135 1459 aa35.67■■■■□ 3.3
CACNB3-208ENST00000548279 FBXO41Q8TF61 875 aa35.66■■■■□ 3.3
CACNB3-208ENST00000548279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.65■■■■□ 3.3
CACNB3-208ENST00000548279 CFAP65Q6ZU64 1925 aaKnown RBP35.64■■■■□ 3.3
CACNB3-208ENST00000548279 NLRP1Q9C000 1473 aa35.64■■■■□ 3.3
CACNB3-208ENST00000548279 CERKQ8TCT0 537 aa35.63■■■■□ 3.29
CACNB3-208ENST00000548279 VWDEQ8N2E2 1590 aa35.63■■■■□ 3.29
CACNB3-208ENST00000548279 ARHGAP31Q2M1Z3 1444 aa35.59■■■■□ 3.29
CACNB3-208ENST00000548279 PKD2Q13563 968 aa35.58■■■■□ 3.29
CACNB3-208ENST00000548279 UGGT1Q9NYU2 1555 aa35.58■■■■□ 3.29
CACNB3-208ENST00000548279 ANKRD50Q9ULJ7 1429 aa35.57■■■■□ 3.29
CACNB3-208ENST00000548279 LMTK2Q8IWU2 1503 aa35.57■■■■□ 3.28
CACNB3-208ENST00000548279 LTBP4Q8N2S1 1624 aa35.56■■■■□ 3.28
CACNB3-208ENST00000548279 POLR1AO95602 1720 aaPredicted RBP35.55■■■■□ 3.28
CACNB3-208ENST00000548279 KANK1Q14678 1352 aa35.55■■■■□ 3.28
CACNB3-208ENST00000548279 NEURL4Q96JN8 1562 aa35.55■■■■□ 3.28
CACNB3-208ENST00000548279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.53■■■■□ 3.28
CACNB3-208ENST00000548279 ROCK1Q13464 1354 aa35.49■■■■□ 3.27
CACNB3-208ENST00000548279 THEMISQ8N1K5 641 aaPredicted RBP35.47■■■■□ 3.27
CACNB3-208ENST00000548279 EFCAB6Q5THR3 1501 aa35.47■■■■□ 3.27
CACNB3-208ENST00000548279 UBR1Q8IWV7 1749 aa35.46■■■■□ 3.27
CACNB3-208ENST00000548279 ITGAEP38570 1179 aa35.46■■■■□ 3.27
CACNB3-208ENST00000548279 ZNF335Q9H4Z2 1342 aaPredicted RBP35.45■■■■□ 3.27
CACNB3-208ENST00000548279 UNC13BO14795 1591 aa35.43■■■■□ 3.26
CACNB3-208ENST00000548279 RRBP1Q9P2E9 1410 aaKnown RBP35.43■■■■□ 3.26
CACNB3-208ENST00000548279 SYNMO15061 1565 aa35.4■■■■□ 3.26
CACNB3-208ENST00000548279 PIK3C2BO00750 1634 aa35.39■■■■□ 3.26
CACNB3-208ENST00000548279 ANKLE2Q86XL3 938 aa35.39■■■■□ 3.26
CACNB3-208ENST00000548279 MED14O60244 1454 aa35.36■■■■□ 3.25
CACNB3-208ENST00000548279 NOS1P29475 1434 aa35.36■■■■□ 3.25
CACNB3-208ENST00000548279 TET3O43151 1660 aa35.36■■■■□ 3.25
CACNB3-208ENST00000548279 NPHP4O75161 1426 aaPredicted RBP35.33■■■■□ 3.25
CACNB3-208ENST00000548279 IQGAP1P46940 1657 aa35.3■■■■□ 3.24
CACNB3-208ENST00000548279 GCC2Q8IWJ2 1684 aa35.3■■■■□ 3.24
CACNB3-208ENST00000548279 ARHGAP23Q9P227 1491 aa35.3■■■■□ 3.24
CACNB3-208ENST00000548279 SLIT1O75093 1534 aa35.29■■■■□ 3.24
CACNB3-208ENST00000548279 IQSEC2Q5JU85 1478 aa35.29■■■■□ 3.24
CACNB3-208ENST00000548279 IQGAP3Q86VI3 1631 aa35.28■■■■□ 3.24
CACNB3-208ENST00000548279 IDI1Q13907 227 aa35.28■■■■□ 3.24
CACNB3-208ENST00000548279 RPRD2Q5VT52 1461 aaKnown RBP35.28■■■■□ 3.24
CACNB3-208ENST00000548279 KDM5AP29375 1690 aaKnown RBP35.25■■■■□ 3.23
CACNB3-208ENST00000548279 E9PCH4 1651 aa35.24■■■■□ 3.23
CACNB3-208ENST00000548279 SCAF11Q99590 1463 aaKnown RBP35.24■■■■□ 3.23
CACNB3-208ENST00000548279 LTKP29376 864 aa35.23■■■■□ 3.23
CACNB3-208ENST00000548279 ADGRB3O60242 1522 aa35.2■■■■□ 3.23
CACNB3-208ENST00000548279 TMEM2Q9UHN6 1383 aa35.19■■■■□ 3.22
CACNB3-208ENST00000548279 NUP155O75694 1391 aa35.18■■■■□ 3.22
CACNB3-208ENST00000548279 TXNDC2Q86VQ3 553 aa35.17■■■■□ 3.22
CACNB3-208ENST00000548279 STAG3Q9UJ98 1225 aa35.17■■■■□ 3.22
CACNB3-208ENST00000548279 NAIPQ13075 1403 aa35.15■■■■□ 3.22
CACNB3-208ENST00000548279 SLC52A1Q9NWF4 448 aa35.14■■■■□ 3.22
CACNB3-208ENST00000548279 CPS1P31327 1500 aa35.14■■■■□ 3.22
CACNB3-208ENST00000548279 STRCP1A6NGW2 1772 aa35.14■■■■□ 3.22
CACNB3-208ENST00000548279 MYO5BQ9ULV0 1848 aa35.12■■■■□ 3.21
CACNB3-208ENST00000548279 EID1Q9Y6B2 187 aa35.08■■■■□ 3.21
CACNB3-208ENST00000548279 TMEM131LA2VDJ0 1609 aa35.07■■■■□ 3.21
CACNB3-208ENST00000548279 HFM1A2PYH4 1435 aa35.02■■■■□ 3.2
CACNB3-208ENST00000548279 UBAP1LF5GYI3 381 aa35.01■■■■□ 3.2
CACNB3-208ENST00000548279 ZFYVE9O95405 1425 aa35■■■■□ 3.19
CACNB3-208ENST00000548279 SPHKAPQ2M3C7 1700 aa34.97■■■■□ 3.19
CACNB3-208ENST00000548279 LRRC7Q96NW7 1537 aa34.96■■■■□ 3.19
CACNB3-208ENST00000548279 RIMS2Q9UQ26 1411 aa34.95■■■■□ 3.19
CACNB3-208ENST00000548279 CHGAP10645 457 aaKnown RBP34.93■■■■□ 3.18
CACNB3-208ENST00000548279 ALKQ9UM73 1620 aa34.91■■■■□ 3.18
CACNB3-208ENST00000548279 SLC26A8Q96RN1 970 aa34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms