RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
RNF41-205ENST00000548225 NPATQ14207 1427 aa23.42■■□□□ 1.34
RNF41-205ENST00000548225 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
RNF41-205ENST00000548225 ERBINQ96RT1 1412 aa23.41■■□□□ 1.34
RNF41-205ENST00000548225 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
RNF41-205ENST00000548225 UHRF1BP1Q6BDS2 1440 aa23.4■■□□□ 1.34
RNF41-205ENST00000548225 ADGRL2O95490 1459 aa23.39■■□□□ 1.34
RNF41-205ENST00000548225 ZC3H13Q5T200 1668 aaKnown RBP23.38■■□□□ 1.33
RNF41-205ENST00000548225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.37■■□□□ 1.33
RNF41-205ENST00000548225 NCOA1Q15788 1441 aa23.36■■□□□ 1.33
RNF41-205ENST00000548225 WASHC2CQ9Y4E1 1318 aa23.35■■□□□ 1.33
RNF41-205ENST00000548225 RRP7BPQ9NSQ0 103 aa23.35■■□□□ 1.33
RNF41-205ENST00000548225 PTPRKQ15262 1439 aa23.34■■□□□ 1.33
RNF41-205ENST00000548225 MROH1Q8NDA8 1641 aa23.34■■□□□ 1.33
RNF41-205ENST00000548225 PPARGC1BQ86YN6 1023 aaKnown RBP23.33■■□□□ 1.33
RNF41-205ENST00000548225 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
RNF41-205ENST00000548225 PRDM15P57071 1507 aaPredicted RBP23.32■■□□□ 1.32
RNF41-205ENST00000548225 PZPP20742 1482 aa23.31■■□□□ 1.32
RNF41-205ENST00000548225 DEPDC5O75140 1603 aa23.31■■□□□ 1.32
RNF41-205ENST00000548225 ABCC3O15438 1527 aa23.31■■□□□ 1.32
RNF41-205ENST00000548225 HSPA2P54652 639 aa23.3■■□□□ 1.32
RNF41-205ENST00000548225 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
RNF41-205ENST00000548225 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
RNF41-205ENST00000548225 ZNF142P52746 1687 aaPredicted RBP23.27■■□□□ 1.32
RNF41-205ENST00000548225 ROCK1Q13464 1354 aa23.27■■□□□ 1.31
RNF41-205ENST00000548225 CEP152O94986 1710 aa23.25■■□□□ 1.31
RNF41-205ENST00000548225 CAMSAP1Q5T5Y3 1602 aa23.24■■□□□ 1.31
RNF41-205ENST00000548225 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
RNF41-205ENST00000548225 CEP170BQ9Y4F5 1589 aaPredicted RBP23.23■■□□□ 1.31
RNF41-205ENST00000548225 KANK1Q14678 1352 aa23.22■■□□□ 1.31
RNF41-205ENST00000548225 TNRQ92752 1358 aa23.21■■□□□ 1.31
RNF41-205ENST00000548225 VWDEQ8N2E2 1590 aa23.2■■□□□ 1.3
RNF41-205ENST00000548225 ARHGAP31Q2M1Z3 1444 aa23.19■■□□□ 1.3
RNF41-205ENST00000548225 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
RNF41-205ENST00000548225 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
RNF41-205ENST00000548225 A2ML1A8K2U0 1454 aa23.18■■□□□ 1.3
RNF41-205ENST00000548225 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
RNF41-205ENST00000548225 STRCQ7RTU9 1775 aa23.18■■□□□ 1.3
RNF41-205ENST00000548225 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
RNF41-205ENST00000548225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
RNF41-205ENST00000548225 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
RNF41-205ENST00000548225 PLA2R1Q13018 1463 aa23.14■■□□□ 1.29
RNF41-205ENST00000548225 ITGAEP38570 1179 aa23.14■■□□□ 1.29
RNF41-205ENST00000548225 DMRT2Q9Y5R5 561 aa23.14■■□□□ 1.29
RNF41-205ENST00000548225 UNC13BO14795 1591 aa23.14■■□□□ 1.29
RNF41-205ENST00000548225 EFCAB6Q5THR3 1501 aa23.11■■□□□ 1.29
RNF41-205ENST00000548225 PTPRTO14522 1441 aa23.09■■□□□ 1.29
RNF41-205ENST00000548225 TET3O43151 1660 aa23.06■■□□□ 1.28
RNF41-205ENST00000548225 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
RNF41-205ENST00000548225 RPRD2Q5VT52 1461 aaKnown RBP23.06■■□□□ 1.28
RNF41-205ENST00000548225 PKD2Q13563 968 aa23.05■■□□□ 1.28
RNF41-205ENST00000548225 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
RNF41-205ENST00000548225 GCC2Q8IWJ2 1684 aa23.04■■□□□ 1.28
RNF41-205ENST00000548225 IQGAP3Q86VI3 1631 aa23.04■■□□□ 1.28
RNF41-205ENST00000548225 THEMISQ8N1K5 641 aaPredicted RBP23.02■■□□□ 1.28
RNF41-205ENST00000548225 POLR1AO95602 1720 aaPredicted RBP23.01■■□□□ 1.27
RNF41-205ENST00000548225 NOS1P29475 1434 aa22.99■■□□□ 1.27
RNF41-205ENST00000548225 NAIPQ13075 1403 aa22.99■■□□□ 1.27
RNF41-205ENST00000548225 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
RNF41-205ENST00000548225 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
RNF41-205ENST00000548225 NCKAP5LQ9HCH0 1330 aa22.98■■□□□ 1.27
RNF41-205ENST00000548225 KDM5AP29375 1690 aaKnown RBP22.97■■□□□ 1.27
RNF41-205ENST00000548225 NUP155O75694 1391 aa22.97■■□□□ 1.27
RNF41-205ENST00000548225 SYNMO15061 1565 aa22.97■■□□□ 1.27
RNF41-205ENST00000548225 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
RNF41-205ENST00000548225 E9PCH4 1651 aa22.93■■□□□ 1.26
RNF41-205ENST00000548225 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
RNF41-205ENST00000548225 ANKLE2Q86XL3 938 aa22.93■■□□□ 1.26
RNF41-205ENST00000548225 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
RNF41-205ENST00000548225 SLIT1O75093 1534 aa22.91■■□□□ 1.26
RNF41-205ENST00000548225 MED14O60244 1454 aa22.91■■□□□ 1.26
RNF41-205ENST00000548225 ARHGAP23Q9P227 1491 aa22.89■■□□□ 1.25
RNF41-205ENST00000548225 ADGRB3O60242 1522 aa22.88■■□□□ 1.25
RNF41-205ENST00000548225 IDI1Q13907 227 aa22.88■■□□□ 1.25
RNF41-205ENST00000548225 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
RNF41-205ENST00000548225 NPHP4O75161 1426 aaPredicted RBP22.86■■□□□ 1.25
RNF41-205ENST00000548225 SCAF11Q99590 1463 aaKnown RBP22.85■■□□□ 1.25
RNF41-205ENST00000548225 IQGAP1P46940 1657 aa22.85■■□□□ 1.25
RNF41-205ENST00000548225 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
RNF41-205ENST00000548225 LTBP4Q8N2S1 1624 aa22.85■■□□□ 1.25
RNF41-205ENST00000548225 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
RNF41-205ENST00000548225 FBXO41Q8TF61 875 aa22.81■■□□□ 1.24
RNF41-205ENST00000548225 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
RNF41-205ENST00000548225 SPHKAPQ2M3C7 1700 aa22.81■■□□□ 1.24
RNF41-205ENST00000548225 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
RNF41-205ENST00000548225 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
RNF41-205ENST00000548225 ILDR1Q86SU0 546 aaPredicted RBP22.79■■□□□ 1.24
RNF41-205ENST00000548225 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
RNF41-205ENST00000548225 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
RNF41-205ENST00000548225 ACIN1Q9UKV3 1341 aaKnown RBP22.78■■□□□ 1.24
RNF41-205ENST00000548225 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
RNF41-205ENST00000548225 LTKP29376 864 aa22.76■■□□□ 1.23
RNF41-205ENST00000548225 MYO5BQ9ULV0 1848 aa22.75■■□□□ 1.23
RNF41-205ENST00000548225 TRPM2O94759 1503 aa22.74■■□□□ 1.23
RNF41-205ENST00000548225 CPS1P31327 1500 aa22.74■■□□□ 1.23
RNF41-205ENST00000548225 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
RNF41-205ENST00000548225 SETD5Q9C0A6 1442 aa22.72■■□□□ 1.23
RNF41-205ENST00000548225 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
RNF41-205ENST00000548225 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
RNF41-205ENST00000548225 RIMS2Q9UQ26 1411 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 384 ms