RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
R3HDM2-212ENST00000548161 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
R3HDM2-212ENST00000548161 TNRQ92752 1358 aa13.58□□□□□ -0.24
R3HDM2-212ENST00000548161 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
R3HDM2-212ENST00000548161 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
R3HDM2-212ENST00000548161 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
R3HDM2-212ENST00000548161 PZPP20742 1482 aa13.55□□□□□ -0.24
R3HDM2-212ENST00000548161 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
R3HDM2-212ENST00000548161 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
R3HDM2-212ENST00000548161 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
R3HDM2-212ENST00000548161 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
R3HDM2-212ENST00000548161 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
R3HDM2-212ENST00000548161 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
R3HDM2-212ENST00000548161 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
R3HDM2-212ENST00000548161 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
R3HDM2-212ENST00000548161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
R3HDM2-212ENST00000548161 SHANK2Q9UPX8 1470 aa13.52□□□□□ -0.25
R3HDM2-212ENST00000548161 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
R3HDM2-212ENST00000548161 ARHGEF5Q12774 1597 aa13.51□□□□□ -0.25
R3HDM2-212ENST00000548161 CPS1P31327 1500 aa13.51□□□□□ -0.25
R3HDM2-212ENST00000548161 TOM1O60784 492 aa13.51□□□□□ -0.25
R3HDM2-212ENST00000548161 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
R3HDM2-212ENST00000548161 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
R3HDM2-212ENST00000548161 MED14O60244 1454 aa13.48□□□□□ -0.25
R3HDM2-212ENST00000548161 HSPA1LP34931 641 aa13.48□□□□□ -0.25
R3HDM2-212ENST00000548161 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
R3HDM2-212ENST00000548161 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
R3HDM2-212ENST00000548161 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
R3HDM2-212ENST00000548161 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
R3HDM2-212ENST00000548161 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
R3HDM2-212ENST00000548161 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
R3HDM2-212ENST00000548161 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
R3HDM2-212ENST00000548161 RNF17Q9BXT8 1623 aaKnown RBP13.45□□□□□ -0.26
R3HDM2-212ENST00000548161 VPS8Q8N3P4 1428 aa13.45□□□□□ -0.26
R3HDM2-212ENST00000548161 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
R3HDM2-212ENST00000548161 ABCC3O15438 1527 aa13.44□□□□□ -0.26
R3HDM2-212ENST00000548161 KANK4Q5T7N3 995 aaPredicted RBP13.44□□□□□ -0.26
R3HDM2-212ENST00000548161 LOC105371045A0A1W2PR82 267 aa13.43□□□□□ -0.26
R3HDM2-212ENST00000548161 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
R3HDM2-212ENST00000548161 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
R3HDM2-212ENST00000548161 ZC3H13Q5T200 1668 aaKnown RBP13.41□□□□□ -0.26
R3HDM2-212ENST00000548161 MYOM3Q5VTT5 1437 aa13.41□□□□□ -0.26
R3HDM2-212ENST00000548161 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
R3HDM2-212ENST00000548161 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
R3HDM2-212ENST00000548161 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
R3HDM2-212ENST00000548161 MROH1Q8NDA8 1641 aa13.4□□□□□ -0.26
R3HDM2-212ENST00000548161 ALKQ9UM73 1620 aa13.4□□□□□ -0.26
R3HDM2-212ENST00000548161 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
R3HDM2-212ENST00000548161 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
R3HDM2-212ENST00000548161 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
R3HDM2-212ENST00000548161 STRCP1A6NGW2 1772 aa13.37□□□□□ -0.27
R3HDM2-212ENST00000548161 LTKP29376 864 aa13.37□□□□□ -0.27
R3HDM2-212ENST00000548161 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
R3HDM2-212ENST00000548161 UBR1Q8IWV7 1749 aa13.36□□□□□ -0.27
R3HDM2-212ENST00000548161 KIF15Q9NS87 1388 aa13.36□□□□□ -0.27
R3HDM2-212ENST00000548161 TXNDC2Q86VQ3 553 aa13.36□□□□□ -0.27
R3HDM2-212ENST00000548161 CEP152O94986 1710 aa13.36□□□□□ -0.27
R3HDM2-212ENST00000548161 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
R3HDM2-212ENST00000548161 RRP7BPQ9NSQ0 103 aa13.35□□□□□ -0.27
R3HDM2-212ENST00000548161 ARHGAP23Q9P227 1491 aa13.35□□□□□ -0.27
R3HDM2-212ENST00000548161 SLIT1O75093 1534 aa13.34□□□□□ -0.27
R3HDM2-212ENST00000548161 ABCC5O15440 1437 aa13.34□□□□□ -0.27
R3HDM2-212ENST00000548161 SYNMO15061 1565 aa13.33□□□□□ -0.28
R3HDM2-212ENST00000548161 ERBINQ96RT1 1412 aa13.33□□□□□ -0.28
R3HDM2-212ENST00000548161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
R3HDM2-212ENST00000548161 EID1Q9Y6B2 187 aa13.33□□□□□ -0.28
R3HDM2-212ENST00000548161 PRDM15P57071 1507 aaPredicted RBP13.33□□□□□ -0.28
R3HDM2-212ENST00000548161 PHF23Q9BUL5 403 aaPredicted RBP13.32□□□□□ -0.28
R3HDM2-212ENST00000548161 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
R3HDM2-212ENST00000548161 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-212ENST00000548161 KANK1Q14678 1352 aa13.3□□□□□ -0.28
R3HDM2-212ENST00000548161 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
R3HDM2-212ENST00000548161 APLP2Q06481 763 aa13.29□□□□□ -0.28
R3HDM2-212ENST00000548161 IDI1Q13907 227 aa13.29□□□□□ -0.28
R3HDM2-212ENST00000548161 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
R3HDM2-212ENST00000548161 DAPK1P53355 1430 aa13.29□□□□□ -0.28
R3HDM2-212ENST00000548161 CROCC2H7BZ55 1655 aa13.28□□□□□ -0.28
R3HDM2-212ENST00000548161 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
R3HDM2-212ENST00000548161 XIRP1Q702N8 1843 aaKnown RBP13.27□□□□□ -0.28
R3HDM2-212ENST00000548161 CHIC2Q9UKJ5 165 aa13.27□□□□□ -0.29
R3HDM2-212ENST00000548161 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
R3HDM2-212ENST00000548161 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.29
R3HDM2-212ENST00000548161 KCNA6P17658 529 aa13.26□□□□□ -0.29
R3HDM2-212ENST00000548161 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
R3HDM2-212ENST00000548161 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
R3HDM2-212ENST00000548161 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
R3HDM2-212ENST00000548161 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
R3HDM2-212ENST00000548161 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
R3HDM2-212ENST00000548161 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
R3HDM2-212ENST00000548161 RGS17Q9UGC6 210 aaPredicted RBP13.24□□□□□ -0.29
R3HDM2-212ENST00000548161 TET3O43151 1660 aa13.24□□□□□ -0.29
R3HDM2-212ENST00000548161 NOS1P29475 1434 aa13.23□□□□□ -0.29
R3HDM2-212ENST00000548161 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
R3HDM2-212ENST00000548161 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
R3HDM2-212ENST00000548161 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
R3HDM2-212ENST00000548161 ADGRL2O95490 1459 aa13.2□□□□□ -0.3
R3HDM2-212ENST00000548161 ADGRB3O60242 1522 aa13.18□□□□□ -0.3
R3HDM2-212ENST00000548161 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
R3HDM2-212ENST00000548161 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
R3HDM2-212ENST00000548161 BCANQ96GW7 911 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms