RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
SSH1-206ENST00000547381 DAPK1P53355 1430 aa19.2■□□□□ 0.66
SSH1-206ENST00000547381 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
SSH1-206ENST00000547381 DNMT1P26358 1616 aaKnown RBP19.19■□□□□ 0.66
SSH1-206ENST00000547381 CROCC2H7BZ55 1655 aa19.19■□□□□ 0.66
SSH1-206ENST00000547381 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
SSH1-206ENST00000547381 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
SSH1-206ENST00000547381 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
SSH1-206ENST00000547381 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
SSH1-206ENST00000547381 STRCQ7RTU9 1775 aa19.16■□□□□ 0.66
SSH1-206ENST00000547381 PZPP20742 1482 aa19.16■□□□□ 0.66
SSH1-206ENST00000547381 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
SSH1-206ENST00000547381 ERBINQ96RT1 1412 aa19.15■□□□□ 0.66
SSH1-206ENST00000547381 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.66
SSH1-206ENST00000547381 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
SSH1-206ENST00000547381 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
SSH1-206ENST00000547381 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
SSH1-206ENST00000547381 CEP170BQ9Y4F5 1589 aaPredicted RBP19.12■□□□□ 0.65
SSH1-206ENST00000547381 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
SSH1-206ENST00000547381 PTPRTO14522 1441 aa19.11■□□□□ 0.65
SSH1-206ENST00000547381 TNRQ92752 1358 aa19.11■□□□□ 0.65
SSH1-206ENST00000547381 FBXO31Q5XUX0 539 aaPredicted RBP19.11■□□□□ 0.65
SSH1-206ENST00000547381 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
SSH1-206ENST00000547381 CAMSAP1Q5T5Y3 1602 aa19.11■□□□□ 0.65
SSH1-206ENST00000547381 ABCC3O15438 1527 aa19.1■□□□□ 0.65
SSH1-206ENST00000547381 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
SSH1-206ENST00000547381 MROH1Q8NDA8 1641 aa19.08■□□□□ 0.65
SSH1-206ENST00000547381 FBXO41Q8TF61 875 aa19.08■□□□□ 0.64
SSH1-206ENST00000547381 ADGRL2O95490 1459 aa19.08■□□□□ 0.64
SSH1-206ENST00000547381 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
SSH1-206ENST00000547381 PKD2Q13563 968 aa19.07■□□□□ 0.64
SSH1-206ENST00000547381 PRDM15P57071 1507 aaPredicted RBP19.06■□□□□ 0.64
SSH1-206ENST00000547381 KANK1Q14678 1352 aa19.06■□□□□ 0.64
SSH1-206ENST00000547381 NLRP1Q9C000 1473 aa19.05■□□□□ 0.64
SSH1-206ENST00000547381 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
SSH1-206ENST00000547381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.64
SSH1-206ENST00000547381 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
SSH1-206ENST00000547381 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SSH1-206ENST00000547381 THEMISQ8N1K5 641 aaPredicted RBP19.02■□□□□ 0.64
SSH1-206ENST00000547381 CEP152O94986 1710 aa19.02■□□□□ 0.63
SSH1-206ENST00000547381 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.63
SSH1-206ENST00000547381 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
SSH1-206ENST00000547381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.01■□□□□ 0.63
SSH1-206ENST00000547381 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
SSH1-206ENST00000547381 ERVK-7P63135 1459 aa19■□□□□ 0.63
SSH1-206ENST00000547381 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
SSH1-206ENST00000547381 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
SSH1-206ENST00000547381 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
SSH1-206ENST00000547381 LMTK2Q8IWU2 1503 aa18.97■□□□□ 0.63
SSH1-206ENST00000547381 ANKLE2Q86XL3 938 aa18.96■□□□□ 0.63
SSH1-206ENST00000547381 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
SSH1-206ENST00000547381 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
SSH1-206ENST00000547381 POLR1AO95602 1720 aaPredicted RBP18.92■□□□□ 0.62
SSH1-206ENST00000547381 ITGAEP38570 1179 aa18.91■□□□□ 0.62
SSH1-206ENST00000547381 LTBP4Q8N2S1 1624 aa18.91■□□□□ 0.62
SSH1-206ENST00000547381 EFCAB6Q5THR3 1501 aa18.9■□□□□ 0.62
SSH1-206ENST00000547381 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
SSH1-206ENST00000547381 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
SSH1-206ENST00000547381 MED14O60244 1454 aa18.88■□□□□ 0.61
SSH1-206ENST00000547381 IQSEC2Q5JU85 1478 aa18.88■□□□□ 0.61
SSH1-206ENST00000547381 NEURL4Q96JN8 1562 aa18.88■□□□□ 0.61
SSH1-206ENST00000547381 RPRD2Q5VT52 1461 aaKnown RBP18.87■□□□□ 0.61
SSH1-206ENST00000547381 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
SSH1-206ENST00000547381 UNC13BO14795 1591 aa18.85■□□□□ 0.61
SSH1-206ENST00000547381 NPHP4O75161 1426 aaPredicted RBP18.85■□□□□ 0.61
SSH1-206ENST00000547381 STAG3Q9UJ98 1225 aa18.85■□□□□ 0.61
SSH1-206ENST00000547381 NOS1P29475 1434 aa18.84■□□□□ 0.61
SSH1-206ENST00000547381 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
SSH1-206ENST00000547381 TET3O43151 1660 aa18.83■□□□□ 0.61
SSH1-206ENST00000547381 IDI1Q13907 227 aa18.83■□□□□ 0.6
SSH1-206ENST00000547381 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
SSH1-206ENST00000547381 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
SSH1-206ENST00000547381 SLIT1O75093 1534 aa18.82■□□□□ 0.6
SSH1-206ENST00000547381 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
SSH1-206ENST00000547381 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
SSH1-206ENST00000547381 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
SSH1-206ENST00000547381 ARHGAP23Q9P227 1491 aa18.81■□□□□ 0.6
SSH1-206ENST00000547381 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
SSH1-206ENST00000547381 SYNMO15061 1565 aa18.81■□□□□ 0.6
SSH1-206ENST00000547381 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
SSH1-206ENST00000547381 NUP155O75694 1391 aa18.8■□□□□ 0.6
SSH1-206ENST00000547381 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
SSH1-206ENST00000547381 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
SSH1-206ENST00000547381 CPS1P31327 1500 aa18.79■□□□□ 0.6
SSH1-206ENST00000547381 LTKP29376 864 aa18.78■□□□□ 0.6
SSH1-206ENST00000547381 ADGRB3O60242 1522 aa18.75■□□□□ 0.59
SSH1-206ENST00000547381 E9PCH4 1651 aa18.73■□□□□ 0.59
SSH1-206ENST00000547381 NAIPQ13075 1403 aa18.73■□□□□ 0.59
SSH1-206ENST00000547381 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
SSH1-206ENST00000547381 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
SSH1-206ENST00000547381 HFM1A2PYH4 1435 aa18.69■□□□□ 0.58
SSH1-206ENST00000547381 TMEM131LA2VDJ0 1609 aa18.67■□□□□ 0.58
SSH1-206ENST00000547381 TOM1O60784 492 aa18.66■□□□□ 0.58
SSH1-206ENST00000547381 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
SSH1-206ENST00000547381 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
SSH1-206ENST00000547381 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
SSH1-206ENST00000547381 BCANQ96GW7 911 aa18.64■□□□□ 0.57
SSH1-206ENST00000547381 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
SSH1-206ENST00000547381 RIMS2Q9UQ26 1411 aa18.64■□□□□ 0.57
SSH1-206ENST00000547381 STRCP1A6NGW2 1772 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms