RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TSPY4P0CV99 314 aa18.66■□□□□ 0.58
HDAC7-226ENST00000547259 TSPY10P0CW01 314 aa18.66■□□□□ 0.58
HDAC7-226ENST00000547259 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
HDAC7-226ENST00000547259 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
HDAC7-226ENST00000547259 KIF3BO15066 747 aa18.64■□□□□ 0.57
HDAC7-226ENST00000547259 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
HDAC7-226ENST00000547259 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.57
HDAC7-226ENST00000547259 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
HDAC7-226ENST00000547259 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
HDAC7-226ENST00000547259 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-226ENST00000547259 KDM5DQ9BY66 1539 aa18.6■□□□□ 0.57
HDAC7-226ENST00000547259 DNMT1P26358 1616 aaKnown RBP18.6■□□□□ 0.57
HDAC7-226ENST00000547259 TNRQ92752 1358 aa18.59■□□□□ 0.57
HDAC7-226ENST00000547259 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
HDAC7-226ENST00000547259 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-226ENST00000547259 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
HDAC7-226ENST00000547259 PZPP20742 1482 aa18.58■□□□□ 0.57
HDAC7-226ENST00000547259 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
HDAC7-226ENST00000547259 POLR1AO95602 1720 aaPredicted RBP18.56■□□□□ 0.56
HDAC7-226ENST00000547259 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
HDAC7-226ENST00000547259 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
HDAC7-226ENST00000547259 SOCS7O14512 581 aa18.55■□□□□ 0.56
HDAC7-226ENST00000547259 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
HDAC7-226ENST00000547259 MIA2Q96PC5 1412 aa18.53■□□□□ 0.56
HDAC7-226ENST00000547259 CPS1P31327 1500 aa18.53■□□□□ 0.56
HDAC7-226ENST00000547259 MYOM3Q5VTT5 1437 aa18.52■□□□□ 0.56
HDAC7-226ENST00000547259 TOM1O60784 492 aa18.52■□□□□ 0.56
HDAC7-226ENST00000547259 ILDR2Q71H61 639 aa18.51■□□□□ 0.55
HDAC7-226ENST00000547259 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
HDAC7-226ENST00000547259 UGGT1Q9NYU2 1555 aa18.49■□□□□ 0.55
HDAC7-226ENST00000547259 MAST1Q9Y2H9 1570 aa18.49■□□□□ 0.55
HDAC7-226ENST00000547259 SHANK2Q9UPX8 1470 aa18.48■□□□□ 0.55
HDAC7-226ENST00000547259 PTPN23Q9H3S7 1636 aa18.48■□□□□ 0.55
HDAC7-226ENST00000547259 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
HDAC7-226ENST00000547259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.47■□□□□ 0.55
HDAC7-226ENST00000547259 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
HDAC7-226ENST00000547259 RNF17Q9BXT8 1623 aaKnown RBP18.47■□□□□ 0.55
HDAC7-226ENST00000547259 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
HDAC7-226ENST00000547259 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
HDAC7-226ENST00000547259 MED14O60244 1454 aa18.46■□□□□ 0.54
HDAC7-226ENST00000547259 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
HDAC7-226ENST00000547259 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
HDAC7-226ENST00000547259 ABCC3O15438 1527 aa18.42■□□□□ 0.54
HDAC7-226ENST00000547259 DUOX2Q9NRD8 1548 aa18.41■□□□□ 0.54
HDAC7-226ENST00000547259 CFAP65Q6ZU64 1925 aaKnown RBP18.41■□□□□ 0.54
HDAC7-226ENST00000547259 RRBP1Q9P2E9 1410 aaKnown RBP18.4■□□□□ 0.54
HDAC7-226ENST00000547259 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
HDAC7-226ENST00000547259 PIP4K2BP78356 416 aa18.39■□□□□ 0.53
HDAC7-226ENST00000547259 ERVK-7P63135 1459 aa18.38■□□□□ 0.53
HDAC7-226ENST00000547259 VWDEQ8N2E2 1590 aa18.38■□□□□ 0.53
HDAC7-226ENST00000547259 CROCC2H7BZ55 1655 aa18.36■□□□□ 0.53
HDAC7-226ENST00000547259 ARHGAP31Q2M1Z3 1444 aa18.35■□□□□ 0.53
HDAC7-226ENST00000547259 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
HDAC7-226ENST00000547259 HSPA1LP34931 641 aa18.35■□□□□ 0.53
HDAC7-226ENST00000547259 CEP152O94986 1710 aa18.35■□□□□ 0.53
HDAC7-226ENST00000547259 KANK1Q14678 1352 aa18.34■□□□□ 0.53
HDAC7-226ENST00000547259 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
HDAC7-226ENST00000547259 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
HDAC7-226ENST00000547259 EID1Q9Y6B2 187 aa18.34■□□□□ 0.53
HDAC7-226ENST00000547259 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
HDAC7-226ENST00000547259 UBR1Q8IWV7 1749 aa18.32■□□□□ 0.52
HDAC7-226ENST00000547259 SYNMO15061 1565 aa18.31■□□□□ 0.52
HDAC7-226ENST00000547259 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-226ENST00000547259 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
HDAC7-226ENST00000547259 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
HDAC7-226ENST00000547259 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
HDAC7-226ENST00000547259 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
HDAC7-226ENST00000547259 ABCC5O15440 1437 aa18.29■□□□□ 0.52
HDAC7-226ENST00000547259 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
HDAC7-226ENST00000547259 SLIT1O75093 1534 aa18.28■□□□□ 0.52
HDAC7-226ENST00000547259 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
HDAC7-226ENST00000547259 DAPK1P53355 1430 aa18.27■□□□□ 0.52
HDAC7-226ENST00000547259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.52
HDAC7-226ENST00000547259 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
HDAC7-226ENST00000547259 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-226ENST00000547259 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
HDAC7-226ENST00000547259 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-226ENST00000547259 STRCP1A6NGW2 1772 aa18.25■□□□□ 0.51
HDAC7-226ENST00000547259 LTKP29376 864 aa18.24■□□□□ 0.51
HDAC7-226ENST00000547259 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
HDAC7-226ENST00000547259 ITGAEP38570 1179 aa18.22■□□□□ 0.51
HDAC7-226ENST00000547259 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
HDAC7-226ENST00000547259 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-226ENST00000547259 PIK3C2BO00750 1634 aa18.2■□□□□ 0.5
HDAC7-226ENST00000547259 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
HDAC7-226ENST00000547259 SLC52A1Q9NWF4 448 aa18.2■□□□□ 0.5
HDAC7-226ENST00000547259 EFCAB6Q5THR3 1501 aa18.18■□□□□ 0.5
HDAC7-226ENST00000547259 IDI1Q13907 227 aa18.18■□□□□ 0.5
HDAC7-226ENST00000547259 CHIC2Q9UKJ5 165 aa18.18■□□□□ 0.5
HDAC7-226ENST00000547259 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
HDAC7-226ENST00000547259 ADGRL2O95490 1459 aa18.16■□□□□ 0.5
HDAC7-226ENST00000547259 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
HDAC7-226ENST00000547259 KCNA6P17658 529 aa18.15■□□□□ 0.5
HDAC7-226ENST00000547259 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.49
HDAC7-226ENST00000547259 XIRP1Q702N8 1843 aaKnown RBP18.13■□□□□ 0.49
HDAC7-226ENST00000547259 NOS1P29475 1434 aa18.13■□□□□ 0.49
HDAC7-226ENST00000547259 FAM135BQ49AJ0 1406 aa18.13■□□□□ 0.49
HDAC7-226ENST00000547259 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-226ENST00000547259 BCANQ96GW7 911 aa18.11■□□□□ 0.49
HDAC7-226ENST00000547259 ADGRB3O60242 1522 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms