RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 ADGBQ8N7X0 1667 aa38.98■■■■□ 3.83
PRDM4-202ENST00000547188 ANKLE2Q86XL3 938 aa38.98■■■■□ 3.83
PRDM4-202ENST00000547188 STRCP1A6NGW2 1772 aa38.95■■■■□ 3.83
PRDM4-202ENST00000547188 CASKIN1Q8WXD9 1431 aa38.95■■■■□ 3.83
PRDM4-202ENST00000547188 KIAA1107Q9UPP5 1409 aa38.92■■■■□ 3.82
PRDM4-202ENST00000547188 NPHP4O75161 1426 aaPredicted RBP38.91■■■■□ 3.82
PRDM4-202ENST00000547188 CFDP1Q9UEE9 299 aaPredicted RBP38.87■■■■□ 3.81
PRDM4-202ENST00000547188 LRRC7Q96NW7 1537 aa38.87■■■■□ 3.81
PRDM4-202ENST00000547188 PLEKHH2Q8IVE3 1493 aa38.86■■■■□ 3.81
PRDM4-202ENST00000547188 RNF17Q9BXT8 1623 aaKnown RBP38.86■■■■□ 3.81
PRDM4-202ENST00000547188 MED14O60244 1454 aa38.85■■■■□ 3.81
PRDM4-202ENST00000547188 IQGAP1P46940 1657 aa38.84■■■■□ 3.81
PRDM4-202ENST00000547188 THEMISQ8N1K5 641 aaPredicted RBP38.84■■■■□ 3.81
PRDM4-202ENST00000547188 DEPDC5O75140 1603 aa38.84■■■■□ 3.81
PRDM4-202ENST00000547188 PZPP20742 1482 aa38.82■■■■□ 3.81
PRDM4-202ENST00000547188 UGGT1Q9NYU2 1555 aa38.8■■■■□ 3.8
PRDM4-202ENST00000547188 POTEAQ6S8J7 498 aa38.78■■■■□ 3.8
PRDM4-202ENST00000547188 SYNMO15061 1565 aa38.75■■■■□ 3.79
PRDM4-202ENST00000547188 FAM135AQ9P2D6 1515 aa38.75■■■■□ 3.79
PRDM4-202ENST00000547188 CCNB3Q8WWL7 1395 aa38.74■■■■□ 3.79
PRDM4-202ENST00000547188 KDM5DQ9BY66 1539 aa38.73■■■■□ 3.79
PRDM4-202ENST00000547188 MIA2Q96PC5 1412 aa38.73■■■■□ 3.79
PRDM4-202ENST00000547188 ZNF644Q9H582 1327 aaPredicted RBP38.73■■■■□ 3.79
PRDM4-202ENST00000547188 KIF3BO15066 747 aa38.73■■■■□ 3.79
PRDM4-202ENST00000547188 DHX29Q7Z478 1369 aaKnown RBP38.72■■■■□ 3.79
PRDM4-202ENST00000547188 NLRP1Q9C000 1473 aa38.72■■■■□ 3.79
PRDM4-202ENST00000547188 FYCO1Q9BQS8 1478 aa38.7■■■■□ 3.79
PRDM4-202ENST00000547188 WASHC2CQ9Y4E1 1318 aa38.68■■■■□ 3.78
PRDM4-202ENST00000547188 SETD1AO15047 1707 aaKnown RBP38.66■■■■□ 3.78
PRDM4-202ENST00000547188 MBD5Q9P267 1494 aa38.63■■■■□ 3.77
PRDM4-202ENST00000547188 XIRP1Q702N8 1843 aaKnown RBP38.62■■■■□ 3.77
PRDM4-202ENST00000547188 RTEL1-TNFRSF6BF6WH68 1400 aa38.62■■■■□ 3.77
PRDM4-202ENST00000547188 ZC3H13Q5T200 1668 aaKnown RBP38.6■■■■□ 3.77
PRDM4-202ENST00000547188 TIAM1Q13009 1591 aa38.52■■■■□ 3.76
PRDM4-202ENST00000547188 MTUS2Q5JR59 1369 aa38.47■■■■□ 3.75
PRDM4-202ENST00000547188 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
PRDM4-202ENST00000547188 CFAP65Q6ZU64 1925 aaKnown RBP38.47■■■■□ 3.75
PRDM4-202ENST00000547188 FAM135BQ49AJ0 1406 aa38.45■■■■□ 3.75
PRDM4-202ENST00000547188 UBR1Q8IWV7 1749 aa38.41■■■■□ 3.74
PRDM4-202ENST00000547188 SCAF11Q99590 1463 aaKnown RBP38.39■■■■□ 3.74
PRDM4-202ENST00000547188 CCDC141Q6ZP82 1450 aa38.38■■■■□ 3.73
PRDM4-202ENST00000547188 ROBO1Q9Y6N7 1651 aa38.37■■■■□ 3.73
PRDM4-202ENST00000547188 LTKP29376 864 aa38.37■■■■□ 3.73
PRDM4-202ENST00000547188 ERVK-7P63135 1459 aa38.35■■■■□ 3.73
PRDM4-202ENST00000547188 ABCC3O15438 1527 aa38.33■■■■□ 3.73
PRDM4-202ENST00000547188 TXNDC2Q86VQ3 553 aa38.31■■■■□ 3.72
PRDM4-202ENST00000547188 NCOA2Q15596 1464 aa38.3■■■■□ 3.72
PRDM4-202ENST00000547188 TMEM94Q12767 1356 aa38.26■■■■□ 3.72
PRDM4-202ENST00000547188 CAMSAP2Q08AD1 1489 aa38.26■■■■□ 3.72
PRDM4-202ENST00000547188 UPF1Q92900 1129 aaKnown RBP eCLIP38.25■■■■□ 3.71
PRDM4-202ENST00000547188 ARHGAP23Q9P227 1491 aa38.24■■■■□ 3.71
PRDM4-202ENST00000547188 RBM33Q96EV2 1170 aaKnown RBP38.24■■■■□ 3.71
PRDM4-202ENST00000547188 EHBP1L1Q8N3D4 1523 aa38.23■■■■□ 3.71
PRDM4-202ENST00000547188 CEP152O94986 1710 aa38.23■■■■□ 3.71
PRDM4-202ENST00000547188 SLIT1O75093 1534 aa38.22■■■■□ 3.71
PRDM4-202ENST00000547188 CEP162Q5TB80 1403 aa38.19■■■■□ 3.7
PRDM4-202ENST00000547188 PHLPP1O60346 1717 aa38.18■■■■□ 3.7
PRDM4-202ENST00000547188 RSPH4AQ5TD94 716 aa38.18■■■■□ 3.7
PRDM4-202ENST00000547188 MAP3K1Q13233 1512 aa38.17■■■■□ 3.7
PRDM4-202ENST00000547188 EID1Q9Y6B2 187 aa38.16■■■■□ 3.7
PRDM4-202ENST00000547188 TSPY4P0CV99 314 aa38.13■■■■□ 3.69
PRDM4-202ENST00000547188 TSPY10P0CW01 314 aa38.13■■■■□ 3.69
PRDM4-202ENST00000547188 TRIM52Q96A61 297 aa38.13■■■■□ 3.69
PRDM4-202ENST00000547188 MROH1Q8NDA8 1641 aa38.12■■■■□ 3.69
PRDM4-202ENST00000547188 PROSER2Q86WR7 435 aaPredicted RBP38.12■■■■□ 3.69
PRDM4-202ENST00000547188 JCADQ9P266 1359 aa38.1■■■■□ 3.69
PRDM4-202ENST00000547188 ARHGEF5Q12774 1597 aa38.1■■■■□ 3.69
PRDM4-202ENST00000547188 LRRC9Q6ZRR7 1453 aa38.09■■■■□ 3.69
PRDM4-202ENST00000547188 KCNA6P17658 529 aa38.08■■■■□ 3.69
PRDM4-202ENST00000547188 PIK3C2BO00750 1634 aa38.05■■■■□ 3.68
PRDM4-202ENST00000547188 EIF2AK4Q9P2K8 1649 aaKnown RBP38.05■■■■□ 3.68
PRDM4-202ENST00000547188 SLC26A8Q96RN1 970 aa38.03■■■■□ 3.68
PRDM4-202ENST00000547188 LRP6O75581 1613 aa38.02■■■■□ 3.68
PRDM4-202ENST00000547188 TMEM2Q9UHN6 1383 aa38.02■■■■□ 3.68
PRDM4-202ENST00000547188 SLAIN2Q9P270 581 aa38■■■■□ 3.67
PRDM4-202ENST00000547188 PRDM15P57071 1507 aaPredicted RBP37.99■■■■□ 3.67
PRDM4-202ENST00000547188 MEX3CQ5U5Q3 659 aaKnown RBP37.98■■■■□ 3.67
PRDM4-202ENST00000547188 COL16A1Q07092 1604 aaPredicted RBP37.97■■■■□ 3.67
PRDM4-202ENST00000547188 ZNF772Q68DY9 489 aaPredicted RBP37.96■■■■□ 3.67
PRDM4-202ENST00000547188 STAG3Q9UJ98 1225 aa37.96■■■■□ 3.67
PRDM4-202ENST00000547188 MSH6P52701 1360 aa37.95■■■■□ 3.67
PRDM4-202ENST00000547188 MAST1Q9Y2H9 1570 aa37.94■■■■□ 3.66
PRDM4-202ENST00000547188 TET3O43151 1660 aa37.94■■■■□ 3.66
PRDM4-202ENST00000547188 NKTRP30414 1462 aaKnown RBP37.89■■■■□ 3.66
PRDM4-202ENST00000547188 NWD1Q149M9 1564 aa37.89■■■■□ 3.66
PRDM4-202ENST00000547188 ARHGAP31Q2M1Z3 1444 aa37.88■■■■□ 3.66
PRDM4-202ENST00000547188 EFCAB6Q5THR3 1501 aa37.87■■■■□ 3.65
PRDM4-202ENST00000547188 SPATA31A6Q5VVP1 1343 aa37.87■■■■□ 3.65
PRDM4-202ENST00000547188 RXRBP28702 533 aa37.86■■■■□ 3.65
PRDM4-202ENST00000547188 SRCAPQ6ZRS2 3230 aa37.82■■■■□ 3.64
PRDM4-202ENST00000547188 KDM5AP29375 1690 aaKnown RBP37.8■■■■□ 3.64
PRDM4-202ENST00000547188 IDI1Q13907 227 aa37.8■■■■□ 3.64
PRDM4-202ENST00000547188 FGD6Q6ZV73 1430 aa37.79■■■■□ 3.64
PRDM4-202ENST00000547188 BCANQ96GW7 911 aa37.79■■■■□ 3.64
PRDM4-202ENST00000547188 DUOX2Q9NRD8 1548 aa37.78■■■■□ 3.64
PRDM4-202ENST00000547188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.77■■■■□ 3.64
PRDM4-202ENST00000547188 SHPRHQ149N8 1683 aa37.76■■■■□ 3.64
PRDM4-202ENST00000547188 CHD2O14647 1828 aaKnown RBP37.73■■■■□ 3.63
PRDM4-202ENST00000547188 CDK12Q9NYV4 1490 aaPredicted RBP37.71■■■■□ 3.63
PRDM4-202ENST00000547188 NUTM2BA6NNL0 878 aaPredicted RBP37.7■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms