RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
VDR-204ENST00000547065 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
VDR-204ENST00000547065 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
VDR-204ENST00000547065 USP47Q96K76 1375 aa25.96■■□□□ 1.75
VDR-204ENST00000547065 ATP10AO60312 1499 aa25.96■■□□□ 1.75
VDR-204ENST00000547065 SCAPERQ9BY12 1400 aa25.96■■□□□ 1.75
VDR-204ENST00000547065 KDM2AQ9Y2K7 1162 aa25.95■■□□□ 1.75
VDR-204ENST00000547065 ADGRL1O94910 1474 aa25.95■■□□□ 1.74
VDR-204ENST00000547065 KIF7Q2M1P5 1343 aa25.94■■□□□ 1.74
VDR-204ENST00000547065 CARD11Q9BXL7 1154 aa25.91■■□□□ 1.74
VDR-204ENST00000547065 ARID4BQ4LE39 1312 aaPredicted RBP25.91■■□□□ 1.74
VDR-204ENST00000547065 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
VDR-204ENST00000547065 INO80Q9ULG1 1556 aaPredicted RBP25.89■■□□□ 1.73
VDR-204ENST00000547065 KDM5CP41229 1560 aa25.88■■□□□ 1.73
VDR-204ENST00000547065 POLR1AO95602 1720 aaPredicted RBP25.87■■□□□ 1.73
VDR-204ENST00000547065 MYT1LQ9UL68 1186 aa25.86■■□□□ 1.73
VDR-204ENST00000547065 DHX29Q7Z478 1369 aaKnown RBP25.86■■□□□ 1.73
VDR-204ENST00000547065 RGL3Q3MIN7 710 aa25.84■■□□□ 1.73
VDR-204ENST00000547065 CD109Q6YHK3 1445 aa25.84■■□□□ 1.73
VDR-204ENST00000547065 PRAG1Q86YV5 1406 aa25.84■■□□□ 1.73
VDR-204ENST00000547065 KANK1Q14678 1352 aa25.84■■□□□ 1.73
VDR-204ENST00000547065 DEPDC5O75140 1603 aa25.81■■□□□ 1.72
VDR-204ENST00000547065 ROCK2O75116 1388 aaKnown RBP25.81■■□□□ 1.72
VDR-204ENST00000547065 A2MP01023 1474 aa25.81■■□□□ 1.72
VDR-204ENST00000547065 ZNF518AQ6AHZ1 1483 aa25.79■■□□□ 1.72
VDR-204ENST00000547065 CFAP74Q9C0B2 1584 aa25.79■■□□□ 1.72
VDR-204ENST00000547065 KIF3BO15066 747 aa25.79■■□□□ 1.72
VDR-204ENST00000547065 PRKRIP1Q9H875 184 aaPredicted RBP25.79■■□□□ 1.72
VDR-204ENST00000547065 BCORL1Q5H9F3 1711 aa25.78■■□□□ 1.72
VDR-204ENST00000547065 PTPRTO14522 1441 aa25.77■■□□□ 1.72
VDR-204ENST00000547065 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
VDR-204ENST00000547065 VWDEQ8N2E2 1590 aa25.76■■□□□ 1.71
VDR-204ENST00000547065 ST20-MTHFSA0A0A6YYL1 179 aa25.75■■□□□ 1.71
VDR-204ENST00000547065 GPRASP1Q5JY77 1395 aa25.74■■□□□ 1.71
VDR-204ENST00000547065 E9PCH4 1651 aa25.74■■□□□ 1.71
VDR-204ENST00000547065 TRPM1Q7Z4N2 1603 aa25.73■■□□□ 1.71
VDR-204ENST00000547065 TET3O43151 1660 aa25.73■■□□□ 1.71
VDR-204ENST00000547065 STAC3Q96MF2 364 aa25.72■■□□□ 1.71
VDR-204ENST00000547065 TRPM2O94759 1503 aa25.72■■□□□ 1.71
VDR-204ENST00000547065 KIDINS220Q9ULH0 1771 aa25.71■■□□□ 1.71
VDR-204ENST00000547065 POGZQ7Z3K3 1410 aa25.71■■□□□ 1.71
VDR-204ENST00000547065 PRDM15P57071 1507 aaPredicted RBP25.69■■□□□ 1.7
VDR-204ENST00000547065 MLH3Q9UHC1 1453 aa25.69■■□□□ 1.7
VDR-204ENST00000547065 NBPF1Q3BBV0 1214 aa25.69■■□□□ 1.7
VDR-204ENST00000547065 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
VDR-204ENST00000547065 NEO1Q92859 1461 aa25.67■■□□□ 1.7
VDR-204ENST00000547065 LAMC1P11047 1609 aa25.67■■□□□ 1.7
VDR-204ENST00000547065 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
VDR-204ENST00000547065 SPHKAPQ2M3C7 1700 aa25.65■■□□□ 1.7
VDR-204ENST00000547065 LMTK2Q8IWU2 1503 aa25.61■■□□□ 1.69
VDR-204ENST00000547065 CCDC184Q52MB2 194 aa25.6■■□□□ 1.69
VDR-204ENST00000547065 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
VDR-204ENST00000547065 CLTCL1P53675 1640 aa25.6■■□□□ 1.69
VDR-204ENST00000547065 MRS2Q9HD23 443 aa25.59■■□□□ 1.69
VDR-204ENST00000547065 NEURL4Q96JN8 1562 aa25.59■■□□□ 1.69
VDR-204ENST00000547065 HECW2Q9P2P5 1572 aa25.59■■□□□ 1.69
VDR-204ENST00000547065 CEP152O94986 1710 aa25.59■■□□□ 1.69
VDR-204ENST00000547065 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.68
VDR-204ENST00000547065 HNRNPUQ00839 825 aaKnown RBP eCLIP25.57■■□□□ 1.68
VDR-204ENST00000547065 EFCAB6Q5THR3 1501 aa25.57■■□□□ 1.68
VDR-204ENST00000547065 SUPT16HQ9Y5B9 1047 aaKnown RBP25.55■■□□□ 1.68
VDR-204ENST00000547065 TESK2Q96S53 571 aa25.54■■□□□ 1.68
VDR-204ENST00000547065 FRMPD1Q5SYB0 1578 aa25.53■■□□□ 1.68
VDR-204ENST00000547065 RAPGEF3O95398 923 aa25.52■■□□□ 1.68
VDR-204ENST00000547065 GLI2P10070 1586 aa25.52■■□□□ 1.68
VDR-204ENST00000547065 MADDQ8WXG6 1647 aa25.52■■□□□ 1.68
VDR-204ENST00000547065 KTN1Q86UP2 1357 aaKnown RBP25.5■■□□□ 1.67
VDR-204ENST00000547065 MAP3K4Q9Y6R4 1608 aa25.5■■□□□ 1.67
VDR-204ENST00000547065 FAM9BQ8IZU0 186 aa25.49■■□□□ 1.67
VDR-204ENST00000547065 TMF1P82094 1093 aa25.49■■□□□ 1.67
VDR-204ENST00000547065 GGT6Q6P531 493 aa25.49■■□□□ 1.67
VDR-204ENST00000547065 PPRC1Q5VV67 1664 aaKnown RBP25.49■■□□□ 1.67
VDR-204ENST00000547065 COL17A1Q9UMD9 1497 aaPredicted RBP25.48■■□□□ 1.67
VDR-204ENST00000547065 RIMBP3CA6NJZ7 1639 aa25.47■■□□□ 1.67
VDR-204ENST00000547065 RIMBP3BA6NNM3 1639 aa25.47■■□□□ 1.67
VDR-204ENST00000547065 ABCA6Q8N139 1617 aa25.47■■□□□ 1.67
VDR-204ENST00000547065 RIMBP3Q9UFD9 1639 aa25.47■■□□□ 1.67
VDR-204ENST00000547065 RALBP1Q15311 655 aa25.46■■□□□ 1.67
VDR-204ENST00000547065 WASHC2CQ9Y4E1 1318 aa25.44■■□□□ 1.66
VDR-204ENST00000547065 DISP3Q9P2K9 1392 aa25.43■■□□□ 1.66
VDR-204ENST00000547065 MYOM2P54296 1465 aa25.43■■□□□ 1.66
VDR-204ENST00000547065 SCAF11Q99590 1463 aaKnown RBP25.42■■□□□ 1.66
VDR-204ENST00000547065 NPATQ14207 1427 aa25.41■■□□□ 1.66
VDR-204ENST00000547065 UGGT1Q9NYU2 1555 aa25.41■■□□□ 1.66
VDR-204ENST00000547065 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
VDR-204ENST00000547065 KIF1BO60333 1816 aa25.4■■□□□ 1.66
VDR-204ENST00000547065 FAM69CQ0P6D2 419 aa25.4■■□□□ 1.66
VDR-204ENST00000547065 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
VDR-204ENST00000547065 ABCC3O15438 1527 aa25.4■■□□□ 1.66
VDR-204ENST00000547065 RICTORQ6R327 1708 aa25.39■■□□□ 1.66
VDR-204ENST00000547065 KIAA1210Q9ULL0 1709 aa25.39■■□□□ 1.66
VDR-204ENST00000547065 NEFLP07196 543 aa25.39■■□□□ 1.65
VDR-204ENST00000547065 IQGAP1P46940 1657 aa25.38■■□□□ 1.65
VDR-204ENST00000547065 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
VDR-204ENST00000547065 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
VDR-204ENST00000547065 MYBBP1AQ9BQG0 1328 aaKnown RBP25.37■■□□□ 1.65
VDR-204ENST00000547065 CDCA8Q53HL2 280 aa25.36■■□□□ 1.65
VDR-204ENST00000547065 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
VDR-204ENST00000547065 EIF3AQ14152 1382 aaKnown RBP25.36■■□□□ 1.65
VDR-204ENST00000547065 FKBP8Q14318 412 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms