RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 ABCC1P33527 1531 aa14.42□□□□□ -0.1
RFX4-207ENST00000546882 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
RFX4-207ENST00000546882 MYO3AQ8NEV4 1616 aa14.41□□□□□ -0.1
RFX4-207ENST00000546882 CEP170BQ9Y4F5 1589 aaPredicted RBP14.4□□□□□ -0.1
RFX4-207ENST00000546882 ATP1B4Q9UN42 357 aaPredicted RBP14.4□□□□□ -0.1
RFX4-207ENST00000546882 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
RFX4-207ENST00000546882 LRRIQ1Q96JM4 1722 aa14.39□□□□□ -0.11
RFX4-207ENST00000546882 PIP4K2BP78356 416 aa14.39□□□□□ -0.11
RFX4-207ENST00000546882 EEA1Q15075 1411 aa14.39□□□□□ -0.11
RFX4-207ENST00000546882 PTPRKQ15262 1439 aa14.39□□□□□ -0.11
RFX4-207ENST00000546882 FMN1Q68DA7 1419 aa14.39□□□□□ -0.11
RFX4-207ENST00000546882 PREX2Q70Z35 1606 aa14.38□□□□□ -0.11
RFX4-207ENST00000546882 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
RFX4-207ENST00000546882 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
RFX4-207ENST00000546882 CLIP1P30622 1438 aa14.36□□□□□ -0.11
RFX4-207ENST00000546882 TOM1O60784 492 aa14.36□□□□□ -0.11
RFX4-207ENST00000546882 ALKQ9UM73 1620 aa14.36□□□□□ -0.11
RFX4-207ENST00000546882 SAMD9LQ8IVG5 1584 aa14.35□□□□□ -0.11
RFX4-207ENST00000546882 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
RFX4-207ENST00000546882 ARHGAP35Q9NRY4 1499 aa14.35□□□□□ -0.11
RFX4-207ENST00000546882 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
RFX4-207ENST00000546882 CPS1P31327 1500 aa14.34□□□□□ -0.11
RFX4-207ENST00000546882 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.12
RFX4-207ENST00000546882 CDC42BPAQ5VT25 1732 aa14.32□□□□□ -0.12
RFX4-207ENST00000546882 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
RFX4-207ENST00000546882 PLXNC1O60486 1568 aa14.32□□□□□ -0.12
RFX4-207ENST00000546882 NEURL4Q96JN8 1562 aa14.32□□□□□ -0.12
RFX4-207ENST00000546882 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
RFX4-207ENST00000546882 POLR1AO95602 1720 aaPredicted RBP14.29□□□□□ -0.12
RFX4-207ENST00000546882 RGS17Q9UGC6 210 aaPredicted RBP14.29□□□□□ -0.12
RFX4-207ENST00000546882 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
RFX4-207ENST00000546882 VWDEQ8N2E2 1590 aa14.28□□□□□ -0.12
RFX4-207ENST00000546882 ATP7AQ04656 1500 aa14.27□□□□□ -0.12
RFX4-207ENST00000546882 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
RFX4-207ENST00000546882 A2MP01023 1474 aa14.27□□□□□ -0.12
RFX4-207ENST00000546882 GGT6Q6P531 493 aa14.27□□□□□ -0.13
RFX4-207ENST00000546882 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
RFX4-207ENST00000546882 HNRNPMP52272 730 aaKnown RBP eCLIP14.26□□□□□ -0.13
RFX4-207ENST00000546882 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
RFX4-207ENST00000546882 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
RFX4-207ENST00000546882 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
RFX4-207ENST00000546882 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
RFX4-207ENST00000546882 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
RFX4-207ENST00000546882 KIAA1107Q9UPP5 1409 aa14.22□□□□□ -0.13
RFX4-207ENST00000546882 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
RFX4-207ENST00000546882 MED14O60244 1454 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 CCDC18Q5T9S5 1454 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 CASKIN1Q8WXD9 1431 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 TNRQ92752 1358 aa14.2□□□□□ -0.14
RFX4-207ENST00000546882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
RFX4-207ENST00000546882 ANKLE2Q86XL3 938 aa14.19□□□□□ -0.14
RFX4-207ENST00000546882 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
RFX4-207ENST00000546882 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
RFX4-207ENST00000546882 DEPDC5O75140 1603 aa14.19□□□□□ -0.14
RFX4-207ENST00000546882 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
RFX4-207ENST00000546882 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
RFX4-207ENST00000546882 THEMISQ8N1K5 641 aaPredicted RBP14.16□□□□□ -0.14
RFX4-207ENST00000546882 PZPP20742 1482 aa14.16□□□□□ -0.14
RFX4-207ENST00000546882 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
RFX4-207ENST00000546882 RNF17Q9BXT8 1623 aaKnown RBP14.15□□□□□ -0.14
RFX4-207ENST00000546882 IQGAP1P46940 1657 aa14.14□□□□□ -0.15
RFX4-207ENST00000546882 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
RFX4-207ENST00000546882 MIA2Q96PC5 1412 aa14.14□□□□□ -0.15
RFX4-207ENST00000546882 UGGT1Q9NYU2 1555 aa14.13□□□□□ -0.15
RFX4-207ENST00000546882 DHX29Q7Z478 1369 aaKnown RBP14.13□□□□□ -0.15
RFX4-207ENST00000546882 SYNMO15061 1565 aa14.13□□□□□ -0.15
RFX4-207ENST00000546882 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
RFX4-207ENST00000546882 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
RFX4-207ENST00000546882 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
RFX4-207ENST00000546882 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
RFX4-207ENST00000546882 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
RFX4-207ENST00000546882 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
RFX4-207ENST00000546882 RTEL1-TNFRSF6BF6WH68 1400 aa14.1□□□□□ -0.15
RFX4-207ENST00000546882 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
RFX4-207ENST00000546882 KIF3BO15066 747 aa14.09□□□□□ -0.15
RFX4-207ENST00000546882 FYCO1Q9BQS8 1478 aa14.09□□□□□ -0.15
RFX4-207ENST00000546882 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
RFX4-207ENST00000546882 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
RFX4-207ENST00000546882 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
RFX4-207ENST00000546882 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
RFX4-207ENST00000546882 FAM135BQ49AJ0 1406 aa14.06□□□□□ -0.16
RFX4-207ENST00000546882 SETD1AO15047 1707 aaKnown RBP14.05□□□□□ -0.16
RFX4-207ENST00000546882 POTEHQ6S545 545 aa14.05□□□□□ -0.16
RFX4-207ENST00000546882 FKBP8Q14318 412 aa14.03□□□□□ -0.16
RFX4-207ENST00000546882 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
RFX4-207ENST00000546882 LTKP29376 864 aa14□□□□□ -0.17
RFX4-207ENST00000546882 UBR1Q8IWV7 1749 aa14□□□□□ -0.17
RFX4-207ENST00000546882 NCOA2Q15596 1464 aa13.99□□□□□ -0.17
RFX4-207ENST00000546882 SCAF11Q99590 1463 aaKnown RBP13.99□□□□□ -0.17
RFX4-207ENST00000546882 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
RFX4-207ENST00000546882 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
RFX4-207ENST00000546882 ERVK-7P63135 1459 aa13.98□□□□□ -0.17
RFX4-207ENST00000546882 ARHGAP23Q9P227 1491 aa13.98□□□□□ -0.17
RFX4-207ENST00000546882 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
RFX4-207ENST00000546882 MTUS2Q5JR59 1369 aa13.97□□□□□ -0.17
RFX4-207ENST00000546882 ABCC3O15438 1527 aa13.97□□□□□ -0.17
RFX4-207ENST00000546882 PROM2Q8N271 834 aa13.97□□□□□ -0.17
RFX4-207ENST00000546882 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms