RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 EPAS1Q99814 870 aa13.12□□□□□ -0.31
NPAS3-204ENST00000546849 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
NPAS3-204ENST00000546849 PHF14O94880 888 aa13.11□□□□□ -0.31
NPAS3-204ENST00000546849 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
NPAS3-204ENST00000546849 MAP3K7O43318 606 aa13.1□□□□□ -0.31
NPAS3-204ENST00000546849 LSM11P83369 360 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPAS3-204ENST00000546849 FCHSD2O94868 740 aa13.09□□□□□ -0.31
NPAS3-204ENST00000546849 PBX2P40425 430 aa13.08□□□□□ -0.32
NPAS3-204ENST00000546849 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
NPAS3-204ENST00000546849 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
NPAS3-204ENST00000546849 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
NPAS3-204ENST00000546849 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
NPAS3-204ENST00000546849 AK7Q96M32 723 aa13.06□□□□□ -0.32
NPAS3-204ENST00000546849 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
NPAS3-204ENST00000546849 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
NPAS3-204ENST00000546849 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
NPAS3-204ENST00000546849 ZNF454Q8N9F8 522 aa13.04□□□□□ -0.32
NPAS3-204ENST00000546849 HIC1Q14526 733 aa13.03□□□□□ -0.32
NPAS3-204ENST00000546849 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
NPAS3-204ENST00000546849 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
NPAS3-204ENST00000546849 GNPATO15228 680 aa13.02□□□□□ -0.33
NPAS3-204ENST00000546849 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
NPAS3-204ENST00000546849 GPR37O15354 613 aa12.99□□□□□ -0.33
NPAS3-204ENST00000546849 FOSBP53539 338 aa12.99□□□□□ -0.33
NPAS3-204ENST00000546849 PRIM1P49642 420 aaKnown RBP12.98□□□□□ -0.33
NPAS3-204ENST00000546849 MAP2K5Q13163 448 aa12.98□□□□□ -0.33
NPAS3-204ENST00000546849 ZDHHC16Q969W1 377 aa12.98□□□□□ -0.33
NPAS3-204ENST00000546849 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
NPAS3-204ENST00000546849 PTGDRQ13258 359 aa12.97□□□□□ -0.33
NPAS3-204ENST00000546849 CDHR5Q9HBB8 845 aa12.96□□□□□ -0.33
NPAS3-204ENST00000546849 BRPF1P55201 1214 aaPredicted RBP12.95□□□□□ -0.34
NPAS3-204ENST00000546849 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
NPAS3-204ENST00000546849 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
NPAS3-204ENST00000546849 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
NPAS3-204ENST00000546849 PSEN2P49810 448 aa12.92□□□□□ -0.34
NPAS3-204ENST00000546849 DMRTA1Q5VZB9 504 aa12.92□□□□□ -0.34
NPAS3-204ENST00000546849 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
NPAS3-204ENST00000546849 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
NPAS3-204ENST00000546849 IRF6O14896 467 aa12.9□□□□□ -0.34
NPAS3-204ENST00000546849 TRIM66O15016 1216 aa12.9□□□□□ -0.34
NPAS3-204ENST00000546849 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
NPAS3-204ENST00000546849 KCNH8Q96L42 1107 aa12.89□□□□□ -0.35
NPAS3-204ENST00000546849 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
NPAS3-204ENST00000546849 TK2O00142 265 aa12.87□□□□□ -0.35
NPAS3-204ENST00000546849 FECHP22830 423 aa12.87□□□□□ -0.35
NPAS3-204ENST00000546849 PDE4DQ08499 809 aa12.87□□□□□ -0.35
NPAS3-204ENST00000546849 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
NPAS3-204ENST00000546849 HRO43593 1189 aa12.86□□□□□ -0.35
NPAS3-204ENST00000546849 PTPREP23469 700 aa12.84□□□□□ -0.35
NPAS3-204ENST00000546849 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-204ENST00000546849 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-204ENST00000546849 DAXXQ9UER7 740 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-204ENST00000546849 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
NPAS3-204ENST00000546849 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
NPAS3-204ENST00000546849 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
NPAS3-204ENST00000546849 KCNK17Q96T54 332 aa12.81□□□□□ -0.36
NPAS3-204ENST00000546849 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
NPAS3-204ENST00000546849 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
NPAS3-204ENST00000546849 PRSS12P56730 875 aa12.78□□□□□ -0.36
NPAS3-204ENST00000546849 AMHR2Q16671 573 aa12.78□□□□□ -0.36
NPAS3-204ENST00000546849 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
NPAS3-204ENST00000546849 OATP04181 439 aa12.77□□□□□ -0.37
NPAS3-204ENST00000546849 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
NPAS3-204ENST00000546849 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
NPAS3-204ENST00000546849 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
NPAS3-204ENST00000546849 CLCN1P35523 988 aa12.73□□□□□ -0.37
NPAS3-204ENST00000546849 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
NPAS3-204ENST00000546849 RBM46Q8TBY0 533 aaKnown RBP12.73□□□□□ -0.37
NPAS3-204ENST00000546849 COL9A1P20849 921 aa12.72□□□□□ -0.37
NPAS3-204ENST00000546849 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
NPAS3-204ENST00000546849 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
NPAS3-204ENST00000546849 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.37
NPAS3-204ENST00000546849 NBPF26B4DH59 902 aa12.7□□□□□ -0.38
NPAS3-204ENST00000546849 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
NPAS3-204ENST00000546849 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
NPAS3-204ENST00000546849 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
NPAS3-204ENST00000546849 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
NPAS3-204ENST00000546849 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
NPAS3-204ENST00000546849 BHMG1C9JSJ3 638 aaPredicted RBP12.68□□□□□ -0.38
NPAS3-204ENST00000546849 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
NPAS3-204ENST00000546849 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
NPAS3-204ENST00000546849 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
NPAS3-204ENST00000546849 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
NPAS3-204ENST00000546849 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
NPAS3-204ENST00000546849 TRIM6-TRIM34B2RNG4 842 aa12.66□□□□□ -0.38
NPAS3-204ENST00000546849 TTC13Q8NBP0 860 aa12.66□□□□□ -0.38
NPAS3-204ENST00000546849 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
NPAS3-204ENST00000546849 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
NPAS3-204ENST00000546849 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
NPAS3-204ENST00000546849 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
NPAS3-204ENST00000546849 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
NPAS3-204ENST00000546849 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
NPAS3-204ENST00000546849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
NPAS3-204ENST00000546849 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
NPAS3-204ENST00000546849 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
NPAS3-204ENST00000546849 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
NPAS3-204ENST00000546849 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
NPAS3-204ENST00000546849 TATDN2Q93075 761 aa12.6□□□□□ -0.39
NPAS3-204ENST00000546849 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
NPAS3-204ENST00000546849 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms