RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 ABCC5O15440 1437 aa12.78□□□□□ -0.36
CALCOCO1-205ENST00000546774 PTPRKQ15262 1439 aa12.78□□□□□ -0.36
CALCOCO1-205ENST00000546774 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-205ENST00000546774 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.37
CALCOCO1-205ENST00000546774 KDM5DQ9BY66 1539 aa12.77□□□□□ -0.37
CALCOCO1-205ENST00000546774 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
CALCOCO1-205ENST00000546774 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
CALCOCO1-205ENST00000546774 DAPK1P53355 1430 aa12.76□□□□□ -0.37
CALCOCO1-205ENST00000546774 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
CALCOCO1-205ENST00000546774 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
CALCOCO1-205ENST00000546774 RNF17Q9BXT8 1623 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-205ENST00000546774 DUOX2Q9NRD8 1548 aa12.75□□□□□ -0.37
CALCOCO1-205ENST00000546774 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
CALCOCO1-205ENST00000546774 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
CALCOCO1-205ENST00000546774 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
CALCOCO1-205ENST00000546774 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
CALCOCO1-205ENST00000546774 CHIC2Q9UKJ5 165 aa12.74□□□□□ -0.37
CALCOCO1-205ENST00000546774 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-205ENST00000546774 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
CALCOCO1-205ENST00000546774 KIF15Q9NS87 1388 aa12.73□□□□□ -0.37
CALCOCO1-205ENST00000546774 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-205ENST00000546774 CEP152O94986 1710 aa12.73□□□□□ -0.37
CALCOCO1-205ENST00000546774 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
CALCOCO1-205ENST00000546774 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
CALCOCO1-205ENST00000546774 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO1-205ENST00000546774 PZPP20742 1482 aa12.72□□□□□ -0.37
CALCOCO1-205ENST00000546774 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
CALCOCO1-205ENST00000546774 MROH1Q8NDA8 1641 aa12.71□□□□□ -0.37
CALCOCO1-205ENST00000546774 ANKRD30AQ9BXX3 1397 aa12.7□□□□□ -0.38
CALCOCO1-205ENST00000546774 ABCC3O15438 1527 aa12.7□□□□□ -0.38
CALCOCO1-205ENST00000546774 TNRQ92752 1358 aa12.69□□□□□ -0.38
CALCOCO1-205ENST00000546774 NCKAP5LQ9HCH0 1330 aa12.69□□□□□ -0.38
CALCOCO1-205ENST00000546774 FBXO41Q8TF61 875 aa12.69□□□□□ -0.38
CALCOCO1-205ENST00000546774 PTPRTO14522 1441 aa12.69□□□□□ -0.38
CALCOCO1-205ENST00000546774 ERBINQ96RT1 1412 aa12.69□□□□□ -0.38
CALCOCO1-205ENST00000546774 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
CALCOCO1-205ENST00000546774 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
CALCOCO1-205ENST00000546774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.389e-8■□□□□ 8.3
CALCOCO1-205ENST00000546774 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
CALCOCO1-205ENST00000546774 PKD2Q13563 968 aa12.66□□□□□ -0.38
CALCOCO1-205ENST00000546774 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO1-205ENST00000546774 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
CALCOCO1-205ENST00000546774 PLA2R1Q13018 1463 aa12.65□□□□□ -0.38
CALCOCO1-205ENST00000546774 SPATA31D1Q6ZQQ2 1576 aa12.64□□□□□ -0.39
CALCOCO1-205ENST00000546774 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
CALCOCO1-205ENST00000546774 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
CALCOCO1-205ENST00000546774 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
CALCOCO1-205ENST00000546774 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
CALCOCO1-205ENST00000546774 KANK1Q14678 1352 aa12.63□□□□□ -0.39
CALCOCO1-205ENST00000546774 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
CALCOCO1-205ENST00000546774 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
CALCOCO1-205ENST00000546774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
CALCOCO1-205ENST00000546774 ITGAEP38570 1179 aa12.61□□□□□ -0.39
CALCOCO1-205ENST00000546774 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
CALCOCO1-205ENST00000546774 ANKRD50Q9ULJ7 1429 aa12.61□□□□□ -0.39
CALCOCO1-205ENST00000546774 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
CALCOCO1-205ENST00000546774 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
CALCOCO1-205ENST00000546774 ANKLE2Q86XL3 938 aa12.6□□□□□ -0.39
CALCOCO1-205ENST00000546774 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
CALCOCO1-205ENST00000546774 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
CALCOCO1-205ENST00000546774 LMTK2Q8IWU2 1503 aa12.58□□□□□ -0.4
CALCOCO1-205ENST00000546774 FOXD1Q16676 465 aa12.58□□□□□ -0.4
CALCOCO1-205ENST00000546774 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
CALCOCO1-205ENST00000546774 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
CALCOCO1-205ENST00000546774 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
CALCOCO1-205ENST00000546774 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO1-205ENST00000546774 EFCAB6Q5THR3 1501 aa12.55□□□□□ -0.4
CALCOCO1-205ENST00000546774 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 IDI1Q13907 227 aa12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 UNC13BO14795 1591 aa12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 TET3O43151 1660 aa12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO1-205ENST00000546774 MED14O60244 1454 aa12.53□□□□□ -0.4
CALCOCO1-205ENST00000546774 SYNMO15061 1565 aa12.53□□□□□ -0.4
CALCOCO1-205ENST00000546774 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
CALCOCO1-205ENST00000546774 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
CALCOCO1-205ENST00000546774 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.41
CALCOCO1-205ENST00000546774 KDM5AP29375 1690 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 MYO5BQ9ULV0 1848 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 ADRA2BP18089 450 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 LTKP29376 864 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 NOS1P29475 1434 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 E9PCH4 1651 aa12.51□□□□□ -0.41
CALCOCO1-205ENST00000546774 RPRD2Q5VT52 1461 aaKnown RBP12.5□□□□□ -0.41
CALCOCO1-205ENST00000546774 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
CALCOCO1-205ENST00000546774 SLIT1O75093 1534 aa12.5□□□□□ -0.41
CALCOCO1-205ENST00000546774 IQGAP3Q86VI3 1631 aa12.5□□□□□ -0.41
CALCOCO1-205ENST00000546774 SCAF11Q99590 1463 aaKnown RBP12.49□□□□□ -0.41
CALCOCO1-205ENST00000546774 NUP155O75694 1391 aa12.49□□□□□ -0.41
CALCOCO1-205ENST00000546774 SLC52A1Q9NWF4 448 aa12.49□□□□□ -0.41
CALCOCO1-205ENST00000546774 EID1Q9Y6B2 187 aa12.49□□□□□ -0.41
CALCOCO1-205ENST00000546774 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
CALCOCO1-205ENST00000546774 TMEM2Q9UHN6 1383 aa12.48□□□□□ -0.41
CALCOCO1-205ENST00000546774 CPS1P31327 1500 aa12.47□□□□□ -0.41
CALCOCO1-205ENST00000546774 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
CALCOCO1-205ENST00000546774 ADGRB3O60242 1522 aa12.46□□□□□ -0.42
CALCOCO1-205ENST00000546774 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
CALCOCO1-205ENST00000546774 NAIPQ13075 1403 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms