RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 CCDC141Q6ZP82 1450 aa23.38■■□□□ 1.33
USP15-206ENST00000546718 CAMSAP2Q08AD1 1489 aa23.37■■□□□ 1.33
USP15-206ENST00000546718 NEURL4Q96JN8 1562 aa23.37■■□□□ 1.33
USP15-206ENST00000546718 KDM5DQ9BY66 1539 aa23.37■■□□□ 1.33
USP15-206ENST00000546718 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
USP15-206ENST00000546718 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
USP15-206ENST00000546718 FAM135AQ9P2D6 1515 aa23.35■■□□□ 1.33
USP15-206ENST00000546718 PZPP20742 1482 aa23.35■■□□□ 1.33
USP15-206ENST00000546718 UBAP1LF5GYI3 381 aa23.34■■□□□ 1.33
USP15-206ENST00000546718 TNRQ92752 1358 aa23.32■■□□□ 1.32
USP15-206ENST00000546718 FBXO31Q5XUX0 539 aaPredicted RBP23.32■■□□□ 1.32
USP15-206ENST00000546718 KIF3BO15066 747 aa23.3■■□□□ 1.32
USP15-206ENST00000546718 ARHGEF5Q12774 1597 aa23.29■■□□□ 1.32
USP15-206ENST00000546718 CPS1P31327 1500 aa23.25■■□□□ 1.31
USP15-206ENST00000546718 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
USP15-206ENST00000546718 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
USP15-206ENST00000546718 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
USP15-206ENST00000546718 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
USP15-206ENST00000546718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.23■■□□□ 1.31
USP15-206ENST00000546718 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
USP15-206ENST00000546718 MIA2Q96PC5 1412 aa23.22■■□□□ 1.31
USP15-206ENST00000546718 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
USP15-206ENST00000546718 RSPH4AQ5TD94 716 aa23.21■■□□□ 1.31
USP15-206ENST00000546718 DEPDC5O75140 1603 aa23.21■■□□□ 1.31
USP15-206ENST00000546718 MAST1Q9Y2H9 1570 aa23.19■■□□□ 1.3
USP15-206ENST00000546718 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
USP15-206ENST00000546718 ABCC3O15438 1527 aa23.18■■□□□ 1.3
USP15-206ENST00000546718 MED14O60244 1454 aa23.18■■□□□ 1.3
USP15-206ENST00000546718 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
USP15-206ENST00000546718 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
USP15-206ENST00000546718 ALKQ9UM73 1620 aa23.17■■□□□ 1.3
USP15-206ENST00000546718 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
USP15-206ENST00000546718 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
USP15-206ENST00000546718 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
USP15-206ENST00000546718 HSPA1LP34931 641 aa23.15■■□□□ 1.3
USP15-206ENST00000546718 ANKLE2Q86XL3 938 aa23.15■■□□□ 1.3
USP15-206ENST00000546718 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
USP15-206ENST00000546718 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.29
USP15-206ENST00000546718 SCAF1Q9H7N4 1312 aaKnown RBP23.13■■□□□ 1.29
USP15-206ENST00000546718 TSPY4P0CV99 314 aa23.13■■□□□ 1.29
USP15-206ENST00000546718 TSPY10P0CW01 314 aa23.13■■□□□ 1.29
USP15-206ENST00000546718 PIP4K2BP78356 416 aa23.13■■□□□ 1.29
USP15-206ENST00000546718 VPS8Q8N3P4 1428 aa23.13■■□□□ 1.29
USP15-206ENST00000546718 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
USP15-206ENST00000546718 STRCP1A6NGW2 1772 aa23.12■■□□□ 1.29
USP15-206ENST00000546718 TOM1O60784 492 aa23.1■■□□□ 1.29
USP15-206ENST00000546718 CEP152O94986 1710 aa23.1■■□□□ 1.29
USP15-206ENST00000546718 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
USP15-206ENST00000546718 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
USP15-206ENST00000546718 SYNMO15061 1565 aa23.06■■□□□ 1.28
USP15-206ENST00000546718 MAP3K1Q13233 1512 aa23.05■■□□□ 1.28
USP15-206ENST00000546718 KANK4Q5T7N3 995 aaPredicted RBP23.05■■□□□ 1.28
USP15-206ENST00000546718 LRRC7Q96NW7 1537 aa23.04■■□□□ 1.28
USP15-206ENST00000546718 DUOX2Q9NRD8 1548 aa23.03■■□□□ 1.28
USP15-206ENST00000546718 PRDM15P57071 1507 aaPredicted RBP23.03■■□□□ 1.28
USP15-206ENST00000546718 CROCC2H7BZ55 1655 aa23.01■■□□□ 1.27
USP15-206ENST00000546718 SCAF11Q99590 1463 aaKnown RBP22.99■■□□□ 1.27
USP15-206ENST00000546718 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
USP15-206ENST00000546718 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
USP15-206ENST00000546718 SLIT1O75093 1534 aa22.98■■□□□ 1.27
USP15-206ENST00000546718 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
USP15-206ENST00000546718 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
USP15-206ENST00000546718 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
USP15-206ENST00000546718 ERBINQ96RT1 1412 aa22.95■■□□□ 1.26
USP15-206ENST00000546718 ABCC5O15440 1437 aa22.93■■□□□ 1.26
USP15-206ENST00000546718 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
USP15-206ENST00000546718 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
USP15-206ENST00000546718 LTKP29376 864 aa22.92■■□□□ 1.26
USP15-206ENST00000546718 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
USP15-206ENST00000546718 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
USP15-206ENST00000546718 DAPK1P53355 1430 aa22.87■■□□□ 1.25
USP15-206ENST00000546718 TXNDC2Q86VQ3 553 aa22.86■■□□□ 1.25
USP15-206ENST00000546718 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
USP15-206ENST00000546718 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
USP15-206ENST00000546718 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
USP15-206ENST00000546718 FGD6Q6ZV73 1430 aa22.83■■□□□ 1.25
USP15-206ENST00000546718 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
USP15-206ENST00000546718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.82■■□□□ 1.246e-7■■■■□ 22.5
USP15-206ENST00000546718 EID1Q9Y6B2 187 aa22.79■■□□□ 1.24
USP15-206ENST00000546718 KANK1Q14678 1352 aa22.78■■□□□ 1.24
USP15-206ENST00000546718 TET3O43151 1660 aa22.78■■□□□ 1.24
USP15-206ENST00000546718 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
USP15-206ENST00000546718 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
USP15-206ENST00000546718 NOS1P29475 1434 aa22.75■■□□□ 1.23
USP15-206ENST00000546718 IDI1Q13907 227 aa22.75■■□□□ 1.23
USP15-206ENST00000546718 TMEM94Q12767 1356 aa22.75■■□□□ 1.23
USP15-206ENST00000546718 FAM135BQ49AJ0 1406 aa22.74■■□□□ 1.23
USP15-206ENST00000546718 NWD1Q149M9 1564 aa22.73■■□□□ 1.23
USP15-206ENST00000546718 RGS17Q9UGC6 210 aaPredicted RBP22.73■■□□□ 1.23
USP15-206ENST00000546718 CHIC2Q9UKJ5 165 aa22.73■■□□□ 1.23
USP15-206ENST00000546718 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
USP15-206ENST00000546718 ADGRL2O95490 1459 aa22.72■■□□□ 1.23
USP15-206ENST00000546718 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
USP15-206ENST00000546718 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
USP15-206ENST00000546718 SLC26A8Q96RN1 970 aa22.69■■□□□ 1.22
USP15-206ENST00000546718 KCNA6P17658 529 aa22.68■■□□□ 1.22
USP15-206ENST00000546718 APLP2Q06481 763 aa22.67■■□□□ 1.22
USP15-206ENST00000546718 RBM33Q96EV2 1170 aaKnown RBP22.67■■□□□ 1.22
USP15-206ENST00000546718 RPRD2Q5VT52 1461 aaKnown RBP22.65■■□□□ 1.22
USP15-206ENST00000546718 ZFYVE9O95405 1425 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms