RNA–Protein interactions for RNA: ENST00000546639.1

SDS-202, Transcript of serine dehydratase, humanhuman

TSL 2

Gene SDS, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-202ENST00000546639 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
SDS-202ENST00000546639 CAMSAP1Q5T5Y3 1602 aa17.37■□□□□ 0.37
SDS-202ENST00000546639 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
SDS-202ENST00000546639 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
SDS-202ENST00000546639 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
SDS-202ENST00000546639 CEP170BQ9Y4F5 1589 aaPredicted RBP17.35■□□□□ 0.37
SDS-202ENST00000546639 MYO3AQ8NEV4 1616 aa17.35■□□□□ 0.37
SDS-202ENST00000546639 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
SDS-202ENST00000546639 PZPP20742 1482 aa17.34■□□□□ 0.37
SDS-202ENST00000546639 TNRQ92752 1358 aa17.32■□□□□ 0.36
SDS-202ENST00000546639 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
SDS-202ENST00000546639 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
SDS-202ENST00000546639 NCKAP5LQ9HCH0 1330 aa17.31■□□□□ 0.36
SDS-202ENST00000546639 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
SDS-202ENST00000546639 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
SDS-202ENST00000546639 THEMISQ8N1K5 641 aaPredicted RBP17.29■□□□□ 0.36
SDS-202ENST00000546639 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
SDS-202ENST00000546639 NLRP1Q9C000 1473 aa17.28■□□□□ 0.36
SDS-202ENST00000546639 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
SDS-202ENST00000546639 LTBP4Q8N2S1 1624 aa17.28■□□□□ 0.36
SDS-202ENST00000546639 RNF17Q9BXT8 1623 aaKnown RBP17.28■□□□□ 0.36
SDS-202ENST00000546639 DNMT1P26358 1616 aaKnown RBP17.27■□□□□ 0.36
SDS-202ENST00000546639 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
SDS-202ENST00000546639 ANKLE2Q86XL3 938 aa17.25■□□□□ 0.35
SDS-202ENST00000546639 KIF15Q9NS87 1388 aa17.25■□□□□ 0.35
SDS-202ENST00000546639 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
SDS-202ENST00000546639 ABCC5O15440 1437 aa17.24■□□□□ 0.35
SDS-202ENST00000546639 FGD6Q6ZV73 1430 aa17.24■□□□□ 0.35
SDS-202ENST00000546639 ABCC3O15438 1527 aa17.24■□□□□ 0.35
SDS-202ENST00000546639 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
SDS-202ENST00000546639 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
SDS-202ENST00000546639 DAPK1P53355 1430 aa17.21■□□□□ 0.35
SDS-202ENST00000546639 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
SDS-202ENST00000546639 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
SDS-202ENST00000546639 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
SDS-202ENST00000546639 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
SDS-202ENST00000546639 KANK1Q14678 1352 aa17.19■□□□□ 0.34
SDS-202ENST00000546639 ARHGAP31Q2M1Z3 1444 aa17.19■□□□□ 0.34
SDS-202ENST00000546639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
SDS-202ENST00000546639 CROCC2H7BZ55 1655 aa17.18■□□□□ 0.34
SDS-202ENST00000546639 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
SDS-202ENST00000546639 ERVK-7P63135 1459 aa17.17■□□□□ 0.34
SDS-202ENST00000546639 PRDM15P57071 1507 aaPredicted RBP17.16■□□□□ 0.34
SDS-202ENST00000546639 MED14O60244 1454 aa17.16■□□□□ 0.34
SDS-202ENST00000546639 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
SDS-202ENST00000546639 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
SDS-202ENST00000546639 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
SDS-202ENST00000546639 CPS1P31327 1500 aa17.14■□□□□ 0.33
SDS-202ENST00000546639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
SDS-202ENST00000546639 CHIC2Q9UKJ5 165 aa17.13■□□□□ 0.33
SDS-202ENST00000546639 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
SDS-202ENST00000546639 NPHP4O75161 1426 aaPredicted RBP17.13■□□□□ 0.33
SDS-202ENST00000546639 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
SDS-202ENST00000546639 ADGRL2O95490 1459 aa17.11■□□□□ 0.33
SDS-202ENST00000546639 CEP152O94986 1710 aa17.1■□□□□ 0.33
SDS-202ENST00000546639 LMTK2Q8IWU2 1503 aa17.1■□□□□ 0.33
SDS-202ENST00000546639 TOM1O60784 492 aa17.09■□□□□ 0.33
SDS-202ENST00000546639 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
SDS-202ENST00000546639 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
SDS-202ENST00000546639 CFAP65Q6ZU64 1925 aaKnown RBP17.06■□□□□ 0.32
SDS-202ENST00000546639 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 TXNDC2Q86VQ3 553 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 SLIT1O75093 1534 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
SDS-202ENST00000546639 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
SDS-202ENST00000546639 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
SDS-202ENST00000546639 DISP3Q9P2K9 1392 aa17.02■□□□□ 0.32
SDS-202ENST00000546639 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.32
SDS-202ENST00000546639 KDM5AP29375 1690 aaKnown RBP17.02■□□□□ 0.32
SDS-202ENST00000546639 IDI1Q13907 227 aa17.02■□□□□ 0.32
SDS-202ENST00000546639 ROCK1Q13464 1354 aa17.02■□□□□ 0.31
SDS-202ENST00000546639 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
SDS-202ENST00000546639 LTKP29376 864 aa17.01■□□□□ 0.31
SDS-202ENST00000546639 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
SDS-202ENST00000546639 NOS1P29475 1434 aa17■□□□□ 0.31
SDS-202ENST00000546639 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
SDS-202ENST00000546639 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
SDS-202ENST00000546639 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
SDS-202ENST00000546639 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
SDS-202ENST00000546639 SYNMO15061 1565 aa16.95■□□□□ 0.3
SDS-202ENST00000546639 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
SDS-202ENST00000546639 TET3O43151 1660 aa16.92■□□□□ 0.3
SDS-202ENST00000546639 HSPA1LP34931 641 aa16.92■□□□□ 0.3
SDS-202ENST00000546639 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
SDS-202ENST00000546639 UNC13BO14795 1591 aa16.91■□□□□ 0.3
SDS-202ENST00000546639 KCNA6P17658 529 aa16.9■□□□□ 0.3
SDS-202ENST00000546639 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.3
SDS-202ENST00000546639 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
SDS-202ENST00000546639 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
SDS-202ENST00000546639 NUP155O75694 1391 aa16.88■□□□□ 0.29
SDS-202ENST00000546639 ITGAEP38570 1179 aa16.86■□□□□ 0.29
SDS-202ENST00000546639 BCANQ96GW7 911 aa16.86■□□□□ 0.29
SDS-202ENST00000546639 SOCS7O14512 581 aa16.85■□□□□ 0.29
SDS-202ENST00000546639 PPP1R15AO75807 674 aaPredicted RBP16.85■□□□□ 0.29
SDS-202ENST00000546639 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
SDS-202ENST00000546639 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
SDS-202ENST00000546639 PLEKHG1Q9ULL1 1385 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms