RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 CNTLNQ9NXG0 1405 aa29.04■■■□□ 2.24
GPN3-204ENST00000546592 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
GPN3-204ENST00000546592 HFM1A2PYH4 1435 aa29.02■■■□□ 2.24
GPN3-204ENST00000546592 FAM135AQ9P2D6 1515 aa29.01■■■□□ 2.23
GPN3-204ENST00000546592 NAIPQ13075 1403 aa29.01■■■□□ 2.23
GPN3-204ENST00000546592 WASHC2CQ9Y4E1 1318 aa29■■■□□ 2.23
GPN3-204ENST00000546592 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.99■■■□□ 2.23
GPN3-204ENST00000546592 KANK1Q14678 1352 aa28.99■■■□□ 2.23
GPN3-204ENST00000546592 PTPRMP28827 1452 aa28.98■■■□□ 2.23
GPN3-204ENST00000546592 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
GPN3-204ENST00000546592 KDM5DQ9BY66 1539 aa28.97■■■□□ 2.23
GPN3-204ENST00000546592 DEPDC5O75140 1603 aa28.96■■■□□ 2.23
GPN3-204ENST00000546592 AEBP2Q6ZN18 517 aaPredicted RBP28.96■■■□□ 2.23
GPN3-204ENST00000546592 PRDM15P57071 1507 aaPredicted RBP28.95■■■□□ 2.23
GPN3-204ENST00000546592 MROH1Q8NDA8 1641 aa28.95■■■□□ 2.23
GPN3-204ENST00000546592 CLTCQ00610 1675 aaKnown RBP28.93■■■□□ 2.22
GPN3-204ENST00000546592 MROH2AA6NES4 1674 aa28.92■■■□□ 2.22
GPN3-204ENST00000546592 ZMYM3Q14202 1370 aa28.91■■■□□ 2.22
GPN3-204ENST00000546592 ZC3H13Q5T200 1668 aaKnown RBP28.91■■■□□ 2.22
GPN3-204ENST00000546592 PLPPR3Q6T4P5 718 aa28.91■■■□□ 2.22
GPN3-204ENST00000546592 ABCC3O15438 1527 aa28.89■■■□□ 2.22
GPN3-204ENST00000546592 TRIM26Q12899 539 aaPredicted RBP28.89■■■□□ 2.22
GPN3-204ENST00000546592 UNC13BO14795 1591 aa28.88■■■□□ 2.21
GPN3-204ENST00000546592 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
GPN3-204ENST00000546592 CEBPAP49715 358 aaPredicted RBP28.86■■■□□ 2.21
GPN3-204ENST00000546592 VWDEQ8N2E2 1590 aa28.84■■■□□ 2.21
GPN3-204ENST00000546592 C3P01024 1663 aa28.84■■■□□ 2.21
GPN3-204ENST00000546592 NUP155O75694 1391 aa28.84■■■□□ 2.21
GPN3-204ENST00000546592 CEP152O94986 1710 aa28.83■■■□□ 2.21
GPN3-204ENST00000546592 ACIN1Q9UKV3 1341 aaKnown RBP28.83■■■□□ 2.21
GPN3-204ENST00000546592 LMTK2Q8IWU2 1503 aa28.82■■■□□ 2.2
GPN3-204ENST00000546592 TRIM52Q96A61 297 aa28.8■■■□□ 2.2
GPN3-204ENST00000546592 PZPP20742 1482 aa28.79■■■□□ 2.2
GPN3-204ENST00000546592 CAMSAP1Q5T5Y3 1602 aa28.79■■■□□ 2.2
GPN3-204ENST00000546592 NPATQ14207 1427 aa28.77■■■□□ 2.2
GPN3-204ENST00000546592 ARHGAP31Q2M1Z3 1444 aa28.77■■■□□ 2.2
GPN3-204ENST00000546592 IQGAP3Q86VI3 1631 aa28.76■■■□□ 2.2
GPN3-204ENST00000546592 RAB3GAP2Q9H2M9 1393 aa28.75■■■□□ 2.19
GPN3-204ENST00000546592 TET3O43151 1660 aa28.73■■■□□ 2.19
GPN3-204ENST00000546592 EFCAB6Q5THR3 1501 aa28.73■■■□□ 2.19
GPN3-204ENST00000546592 FBXO31Q5XUX0 539 aaPredicted RBP28.71■■■□□ 2.19
GPN3-204ENST00000546592 HRCP23327 699 aa28.7■■■□□ 2.18
GPN3-204ENST00000546592 RPRD2Q5VT52 1461 aaKnown RBP28.68■■■□□ 2.18
GPN3-204ENST00000546592 SETD1BQ9UPS6 1966 aaKnown RBP28.68■■■□□ 2.18
GPN3-204ENST00000546592 TNRQ92752 1358 aa28.67■■■□□ 2.18
GPN3-204ENST00000546592 ERVK-7P63135 1459 aa28.66■■■□□ 2.18
GPN3-204ENST00000546592 SLC4A1APQ9BWU0 796 aaKnown RBP28.66■■■□□ 2.18
GPN3-204ENST00000546592 UHRF1BP1Q6BDS2 1440 aa28.65■■■□□ 2.18
GPN3-204ENST00000546592 SPATA31D1Q6ZQQ2 1576 aa28.64■■■□□ 2.18
GPN3-204ENST00000546592 PREX1Q8TCU6 1659 aa28.62■■■□□ 2.17
GPN3-204ENST00000546592 E9PCH4 1651 aa28.6■■■□□ 2.17
GPN3-204ENST00000546592 CFAP65Q6ZU64 1925 aaKnown RBP28.59■■■□□ 2.17
GPN3-204ENST00000546592 MPHOSPH9Q99550 1183 aa28.59■■■□□ 2.17
GPN3-204ENST00000546592 PKD2Q13563 968 aa28.58■■■□□ 2.17
GPN3-204ENST00000546592 NOS1P29475 1434 aa28.57■■■□□ 2.16
GPN3-204ENST00000546592 MYO3AQ8NEV4 1616 aa28.56■■■□□ 2.16
GPN3-204ENST00000546592 NLRP1Q9C000 1473 aa28.56■■■□□ 2.16
GPN3-204ENST00000546592 LMTK3Q96Q04 1460 aa28.54■■■□□ 2.16
GPN3-204ENST00000546592 A2ML1A8K2U0 1454 aa28.52■■■□□ 2.16
GPN3-204ENST00000546592 SLC52A1Q9NWF4 448 aa28.51■■■□□ 2.15
GPN3-204ENST00000546592 CEP170BQ9Y4F5 1589 aaPredicted RBP28.5■■■□□ 2.15
GPN3-204ENST00000546592 PCGF6Q9BYE7 350 aa28.5■■■□□ 2.15
GPN3-204ENST00000546592 SYNMO15061 1565 aa28.5■■■□□ 2.15
GPN3-204ENST00000546592 ZNF142P52746 1687 aaPredicted RBP28.48■■■□□ 2.15
GPN3-204ENST00000546592 PTPRTO14522 1441 aa28.47■■■□□ 2.15
GPN3-204ENST00000546592 IDI1Q13907 227 aa28.46■■■□□ 2.15
GPN3-204ENST00000546592 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
GPN3-204ENST00000546592 STAG3Q9UJ98 1225 aa28.45■■■□□ 2.14
GPN3-204ENST00000546592 HSPA2P54652 639 aa28.44■■■□□ 2.14
GPN3-204ENST00000546592 UGGT1Q9NYU2 1555 aa28.43■■■□□ 2.14
GPN3-204ENST00000546592 FOXD1Q16676 465 aa28.43■■■□□ 2.14
GPN3-204ENST00000546592 THEMISQ8N1K5 641 aaPredicted RBP28.43■■■□□ 2.14
GPN3-204ENST00000546592 TRPM2O94759 1503 aa28.41■■■□□ 2.14
GPN3-204ENST00000546592 PIK3C2BO00750 1634 aa28.39■■■□□ 2.13
GPN3-204ENST00000546592 PLA2R1Q13018 1463 aa28.38■■■□□ 2.13
GPN3-204ENST00000546592 CHGAP10645 457 aaKnown RBP28.36■■■□□ 2.13
GPN3-204ENST00000546592 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
GPN3-204ENST00000546592 UBR1Q8IWV7 1749 aa28.35■■■□□ 2.13
GPN3-204ENST00000546592 ADGRB3O60242 1522 aa28.34■■■□□ 2.13
GPN3-204ENST00000546592 CCDC144AA2RUR9 1427 aa28.33■■■□□ 2.13
GPN3-204ENST00000546592 CLTCL1P53675 1640 aa28.31■■■□□ 2.12
GPN3-204ENST00000546592 ANKLE2Q86XL3 938 aa28.28■■■□□ 2.12
GPN3-204ENST00000546592 TMEM131LA2VDJ0 1609 aa28.28■■■□□ 2.12
GPN3-204ENST00000546592 ANKRD30BQ9BXX2 1392 aa28.27■■■□□ 2.12
GPN3-204ENST00000546592 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.12
GPN3-204ENST00000546592 EID1Q9Y6B2 187 aa28.26■■■□□ 2.11
GPN3-204ENST00000546592 SLIT1O75093 1534 aa28.24■■■□□ 2.11
GPN3-204ENST00000546592 HDGFP51858 240 aaKnown RBP28.24■■■□□ 2.11
GPN3-204ENST00000546592 KIF1BO60333 1816 aa28.23■■■□□ 2.11
GPN3-204ENST00000546592 ARHGAP23Q9P227 1491 aa28.23■■■□□ 2.11
GPN3-204ENST00000546592 DMRT2Q9Y5R5 561 aa28.23■■■□□ 2.11
GPN3-204ENST00000546592 DHX57Q6P158 1386 aaKnown RBP28.23■■■□□ 2.11
GPN3-204ENST00000546592 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
GPN3-204ENST00000546592 ZNF326Q5BKZ1 582 aaKnown RBP28.22■■■□□ 2.11
GPN3-204ENST00000546592 TXNDC2Q86VQ3 553 aa28.22■■■□□ 2.11
GPN3-204ENST00000546592 STRCQ7RTU9 1775 aa28.19■■■□□ 2.1
GPN3-204ENST00000546592 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.19■■■□□ 2.1
GPN3-204ENST00000546592 MYO5BQ9ULV0 1848 aa28.19■■■□□ 2.1
GPN3-204ENST00000546592 SCAF11Q99590 1463 aaKnown RBP28.19■■■□□ 2.1
GPN3-204ENST00000546592 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms