RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 DAPK1P53355 1430 aa16.45■□□□□ 0.22
LMO3-233ENST00000546279 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
LMO3-233ENST00000546279 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
LMO3-233ENST00000546279 PLXNC1O60486 1568 aa16.44■□□□□ 0.22
LMO3-233ENST00000546279 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
LMO3-233ENST00000546279 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
LMO3-233ENST00000546279 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
LMO3-233ENST00000546279 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
LMO3-233ENST00000546279 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
LMO3-233ENST00000546279 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
LMO3-233ENST00000546279 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
LMO3-233ENST00000546279 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
LMO3-233ENST00000546279 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
LMO3-233ENST00000546279 UBAP1LF5GYI3 381 aa16.35■□□□□ 0.21
LMO3-233ENST00000546279 NCOA1Q15788 1441 aa16.35■□□□□ 0.21
LMO3-233ENST00000546279 AGLP35573 1532 aa16.35■□□□□ 0.21
LMO3-233ENST00000546279 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
LMO3-233ENST00000546279 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
LMO3-233ENST00000546279 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
LMO3-233ENST00000546279 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
LMO3-233ENST00000546279 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
LMO3-233ENST00000546279 A2MP01023 1474 aa16.31■□□□□ 0.2
LMO3-233ENST00000546279 C3P01024 1663 aa16.3■□□□□ 0.2
LMO3-233ENST00000546279 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
LMO3-233ENST00000546279 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
LMO3-233ENST00000546279 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
LMO3-233ENST00000546279 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
LMO3-233ENST00000546279 DEPDC5O75140 1603 aa16.29■□□□□ 0.2
LMO3-233ENST00000546279 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
LMO3-233ENST00000546279 NPATQ14207 1427 aa16.28■□□□□ 0.2
LMO3-233ENST00000546279 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
LMO3-233ENST00000546279 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
LMO3-233ENST00000546279 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
LMO3-233ENST00000546279 PKD2Q13563 968 aa16.27■□□□□ 0.2
LMO3-233ENST00000546279 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
LMO3-233ENST00000546279 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
LMO3-233ENST00000546279 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
LMO3-233ENST00000546279 CAMSAP1Q5T5Y3 1602 aa16.25■□□□□ 0.19
LMO3-233ENST00000546279 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
LMO3-233ENST00000546279 NAIPQ13075 1403 aa16.24■□□□□ 0.19
LMO3-233ENST00000546279 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
LMO3-233ENST00000546279 NCKAP5LQ9HCH0 1330 aa16.23■□□□□ 0.19
LMO3-233ENST00000546279 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
LMO3-233ENST00000546279 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
LMO3-233ENST00000546279 UNC13BO14795 1591 aa16.21■□□□□ 0.19
LMO3-233ENST00000546279 PRDM15P57071 1507 aaPredicted RBP16.21■□□□□ 0.19
LMO3-233ENST00000546279 ZMYM3Q14202 1370 aa16.21■□□□□ 0.19
LMO3-233ENST00000546279 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
LMO3-233ENST00000546279 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
LMO3-233ENST00000546279 TOM1O60784 492 aa16.19■□□□□ 0.18
LMO3-233ENST00000546279 ITGAEP38570 1179 aa16.19■□□□□ 0.18
LMO3-233ENST00000546279 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
LMO3-233ENST00000546279 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
LMO3-233ENST00000546279 CEP152O94986 1710 aa16.18■□□□□ 0.18
LMO3-233ENST00000546279 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
LMO3-233ENST00000546279 HSPA1LP34931 641 aa16.17■□□□□ 0.18
LMO3-233ENST00000546279 FAM135AQ9P2D6 1515 aa16.17■□□□□ 0.18
LMO3-233ENST00000546279 CLTCQ00610 1675 aaKnown RBP16.17■□□□□ 0.18
LMO3-233ENST00000546279 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
LMO3-233ENST00000546279 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
LMO3-233ENST00000546279 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
LMO3-233ENST00000546279 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
LMO3-233ENST00000546279 ABCC3O15438 1527 aa16.14■□□□□ 0.17
LMO3-233ENST00000546279 LMTK2Q8IWU2 1503 aa16.13■□□□□ 0.17
LMO3-233ENST00000546279 KIF3BO15066 747 aa16.12■□□□□ 0.17
LMO3-233ENST00000546279 ZNF142P52746 1687 aaPredicted RBP16.1■□□□□ 0.17
LMO3-233ENST00000546279 CPS1P31327 1500 aa16.09■□□□□ 0.17
LMO3-233ENST00000546279 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
LMO3-233ENST00000546279 TET3O43151 1660 aa16.09■□□□□ 0.17
LMO3-233ENST00000546279 SETD5Q9C0A6 1442 aa16.09■□□□□ 0.17
LMO3-233ENST00000546279 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.17
LMO3-233ENST00000546279 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.16
LMO3-233ENST00000546279 PZPP20742 1482 aa16.07■□□□□ 0.16
LMO3-233ENST00000546279 E9PCH4 1651 aa16.07■□□□□ 0.16
LMO3-233ENST00000546279 EFCAB6Q5THR3 1501 aa16.06■□□□□ 0.16
LMO3-233ENST00000546279 GGT6Q6P531 493 aa16.06■□□□□ 0.16
LMO3-233ENST00000546279 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
LMO3-233ENST00000546279 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
LMO3-233ENST00000546279 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
LMO3-233ENST00000546279 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
LMO3-233ENST00000546279 ANKLE2Q86XL3 938 aa16.01■□□□□ 0.15
LMO3-233ENST00000546279 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
LMO3-233ENST00000546279 HRCP23327 699 aa15.99■□□□□ 0.15
LMO3-233ENST00000546279 SYNMO15061 1565 aa15.99■□□□□ 0.15
LMO3-233ENST00000546279 NUP155O75694 1391 aa15.99■□□□□ 0.15
LMO3-233ENST00000546279 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
LMO3-233ENST00000546279 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
LMO3-233ENST00000546279 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
LMO3-233ENST00000546279 SPHKAPQ2M3C7 1700 aa15.97■□□□□ 0.15
LMO3-233ENST00000546279 NOS1P29475 1434 aa15.96■□□□□ 0.15
LMO3-233ENST00000546279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
LMO3-233ENST00000546279 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
LMO3-233ENST00000546279 KANK1Q14678 1352 aa15.96■□□□□ 0.15
LMO3-233ENST00000546279 TNRQ92752 1358 aa15.96■□□□□ 0.15
LMO3-233ENST00000546279 RPRD2Q5VT52 1461 aaKnown RBP15.96■□□□□ 0.14
LMO3-233ENST00000546279 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
LMO3-233ENST00000546279 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
LMO3-233ENST00000546279 NEURL4Q96JN8 1562 aa15.92■□□□□ 0.14
LMO3-233ENST00000546279 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
LMO3-233ENST00000546279 NPHP4O75161 1426 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms