RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 RAPGEF3O95398 923 aa14.72□□□□□ -0.05
CIT-218ENST00000546026 IQGAP3Q86VI3 1631 aa14.72□□□□□ -0.05
CIT-218ENST00000546026 A2MP01023 1474 aa14.71□□□□□ -0.05
CIT-218ENST00000546026 FOXD1Q16676 465 aa14.7□□□□□ -0.06
CIT-218ENST00000546026 TONSLQ96HA7 1378 aa14.7□□□□□ -0.06
CIT-218ENST00000546026 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
CIT-218ENST00000546026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
CIT-218ENST00000546026 ZMYM4Q5VZL5 1548 aa14.69□□□□□ -0.06
CIT-218ENST00000546026 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
CIT-218ENST00000546026 KANK1Q14678 1352 aa14.68□□□□□ -0.06
CIT-218ENST00000546026 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
CIT-218ENST00000546026 KIF3BO15066 747 aa14.67□□□□□ -0.06
CIT-218ENST00000546026 RPRD2Q5VT52 1461 aaKnown RBP14.67□□□□□ -0.06
CIT-218ENST00000546026 ABCA6Q8N139 1617 aa14.66□□□□□ -0.06
CIT-218ENST00000546026 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
CIT-218ENST00000546026 DIP2CQ9Y2E4 1556 aa14.66□□□□□ -0.06
CIT-218ENST00000546026 VWDEQ8N2E2 1590 aa14.65□□□□□ -0.06
CIT-218ENST00000546026 RNF17Q9BXT8 1623 aaKnown RBP14.64□□□□□ -0.07
CIT-218ENST00000546026 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
CIT-218ENST00000546026 ATP10AO60312 1499 aa14.63□□□□□ -0.07
CIT-218ENST00000546026 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
CIT-218ENST00000546026 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
CIT-218ENST00000546026 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
CIT-218ENST00000546026 TET3O43151 1660 aa14.61□□□□□ -0.07
CIT-218ENST00000546026 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
CIT-218ENST00000546026 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
CIT-218ENST00000546026 COL17A1Q9UMD9 1497 aaPredicted RBP14.59□□□□□ -0.07
CIT-218ENST00000546026 L3MBTL2Q969R5 705 aa14.59□□□□□ -0.07
CIT-218ENST00000546026 PLA2R1Q13018 1463 aa14.57□□□□□ -0.08
CIT-218ENST00000546026 E9PCH4 1651 aa14.57□□□□□ -0.08
CIT-218ENST00000546026 PTPRTO14522 1441 aa14.57□□□□□ -0.08
CIT-218ENST00000546026 AGLP35573 1532 aa14.56□□□□□ -0.08
CIT-218ENST00000546026 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
CIT-218ENST00000546026 CCDC144AA2RUR9 1427 aa14.56□□□□□ -0.08
CIT-218ENST00000546026 GGT6Q6P531 493 aa14.55□□□□□ -0.08
CIT-218ENST00000546026 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
CIT-218ENST00000546026 EFCAB6Q5THR3 1501 aa14.53□□□□□ -0.08
CIT-218ENST00000546026 TRPM2O94759 1503 aa14.52□□□□□ -0.08
CIT-218ENST00000546026 ARHGEF40Q8TER5 1519 aa14.52□□□□□ -0.08
CIT-218ENST00000546026 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
CIT-218ENST00000546026 CEP152O94986 1710 aa14.52□□□□□ -0.09
CIT-218ENST00000546026 SPHKAPQ2M3C7 1700 aa14.52□□□□□ -0.09
CIT-218ENST00000546026 ZC3H13Q5T200 1668 aaKnown RBP14.52□□□□□ -0.09
CIT-218ENST00000546026 ABCC3O15438 1527 aa14.51□□□□□ -0.09
CIT-218ENST00000546026 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
CIT-218ENST00000546026 UHRF1BP1Q6BDS2 1440 aa14.49□□□□□ -0.09
CIT-218ENST00000546026 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
CIT-218ENST00000546026 NBPF8Q3BBV2 869 aa14.47□□□□□ -0.09
CIT-218ENST00000546026 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
CIT-218ENST00000546026 NPATQ14207 1427 aa14.47□□□□□ -0.09
CIT-218ENST00000546026 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
CIT-218ENST00000546026 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.09
CIT-218ENST00000546026 CLTCL1P53675 1640 aa14.45□□□□□ -0.1
CIT-218ENST00000546026 SPATA31E1Q6ZUB1 1445 aa14.45□□□□□ -0.1
CIT-218ENST00000546026 DCAF11Q8TEB1 546 aa14.44□□□□□ -0.1
CIT-218ENST00000546026 NOS1P29475 1434 aa14.43□□□□□ -0.1
CIT-218ENST00000546026 SIGLEC1Q9BZZ2 1709 aa14.42□□□□□ -0.1
CIT-218ENST00000546026 RGL3Q3MIN7 710 aa14.42□□□□□ -0.1
CIT-218ENST00000546026 KDM2AQ9Y2K7 1162 aa14.4□□□□□ -0.1
CIT-218ENST00000546026 KIF1BO60333 1816 aa14.4□□□□□ -0.1
CIT-218ENST00000546026 RALGAPBQ86X10 1494 aa14.39□□□□□ -0.11
CIT-218ENST00000546026 EIF4G2P78344 907 aaKnown RBP eCLIP14.39□□□□□ -0.11
CIT-218ENST00000546026 DIEXFQ68CQ4 756 aaKnown RBP14.39□□□□□ -0.11
CIT-218ENST00000546026 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
CIT-218ENST00000546026 SLC52A1Q9NWF4 448 aa14.38□□□□□ -0.11
CIT-218ENST00000546026 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
CIT-218ENST00000546026 ESF1Q9H501 851 aaKnown RBP14.37□□□□□ -0.11
CIT-218ENST00000546026 ARID4BQ4LE39 1312 aaPredicted RBP14.37□□□□□ -0.11
CIT-218ENST00000546026 PIK3C2BO00750 1634 aa14.37□□□□□ -0.11
CIT-218ENST00000546026 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
CIT-218ENST00000546026 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
CIT-218ENST00000546026 SYNMO15061 1565 aa14.36□□□□□ -0.11
CIT-218ENST00000546026 UGGT1Q9NYU2 1555 aa14.36□□□□□ -0.11
CIT-218ENST00000546026 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
CIT-218ENST00000546026 MLECQ14165 292 aa14.36□□□□□ -0.11
CIT-218ENST00000546026 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
CIT-218ENST00000546026 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
CIT-218ENST00000546026 ADGRB3O60242 1522 aa14.35□□□□□ -0.11
CIT-218ENST00000546026 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
CIT-218ENST00000546026 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
CIT-218ENST00000546026 ZMYM3Q14202 1370 aa14.33□□□□□ -0.12
CIT-218ENST00000546026 MYOM2P54296 1465 aa14.32□□□□□ -0.12
CIT-218ENST00000546026 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
CIT-218ENST00000546026 IDI1Q13907 227 aa14.32□□□□□ -0.12
CIT-218ENST00000546026 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
CIT-218ENST00000546026 GPRASP1Q5JY77 1395 aa14.32□□□□□ -0.12
CIT-218ENST00000546026 LAMC1P11047 1609 aa14.31□□□□□ -0.12
CIT-218ENST00000546026 MROH2AA6NES4 1674 aa14.31□□□□□ -0.12
CIT-218ENST00000546026 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
CIT-218ENST00000546026 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
CIT-218ENST00000546026 IFT172Q9UG01 1749 aa14.31□□□□□ -0.12
CIT-218ENST00000546026 ROCK2O75116 1388 aaKnown RBP14.31□□□□□ -0.12
CIT-218ENST00000546026 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
CIT-218ENST00000546026 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
CIT-218ENST00000546026 USP47Q96K76 1375 aa14.29□□□□□ -0.12
CIT-218ENST00000546026 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
CIT-218ENST00000546026 NRXN1Q9ULB1 1477 aa14.28□□□□□ -0.12
CIT-218ENST00000546026 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
CIT-218ENST00000546026 PPLO60437 1756 aa14.27□□□□□ -0.13
CIT-218ENST00000546026 TMEM131LA2VDJ0 1609 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms