RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
PRKAB1-209ENST00000545870 ZCCHC11Q5TAX3 1644 aaKnown RBP11.53□□□□□ -0.56
PRKAB1-209ENST00000545870 USP47Q96K76 1375 aa11.53□□□□□ -0.56
PRKAB1-209ENST00000545870 ATP10AO60312 1499 aa11.52□□□□□ -0.56
PRKAB1-209ENST00000545870 EFCAB2Q5VUJ9 269 aa11.52□□□□□ -0.57
PRKAB1-209ENST00000545870 KDM5CP41229 1560 aa11.52□□□□□ -0.57
PRKAB1-209ENST00000545870 IQGAP3Q86VI3 1631 aa11.52□□□□□ -0.57
PRKAB1-209ENST00000545870 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
PRKAB1-209ENST00000545870 ABCC1P33527 1531 aa11.5□□□□□ -0.57
PRKAB1-209ENST00000545870 NEFLP07196 543 aa11.5□□□□□ -0.57
PRKAB1-209ENST00000545870 PRKRIP1Q9H875 184 aaPredicted RBP11.5□□□□□ -0.57
PRKAB1-209ENST00000545870 RTEL1-TNFRSF6BF6WH68 1400 aa11.5□□□□□ -0.57
PRKAB1-209ENST00000545870 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
PRKAB1-209ENST00000545870 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
PRKAB1-209ENST00000545870 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
PRKAB1-209ENST00000545870 LAMC1P11047 1609 aa11.48□□□□□ -0.57
PRKAB1-209ENST00000545870 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
PRKAB1-209ENST00000545870 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.58
PRKAB1-209ENST00000545870 PRAG1Q86YV5 1406 aa11.45□□□□□ -0.58
PRKAB1-209ENST00000545870 DHX29Q7Z478 1369 aaKnown RBP11.45□□□□□ -0.58
PRKAB1-209ENST00000545870 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
PRKAB1-209ENST00000545870 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
PRKAB1-209ENST00000545870 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
PRKAB1-209ENST00000545870 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
PRKAB1-209ENST00000545870 HNRNPUQ00839 825 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRKAB1-209ENST00000545870 ERICH6BQ5W0A0 696 aa11.44□□□□□ -0.58
PRKAB1-209ENST00000545870 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
PRKAB1-209ENST00000545870 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
PRKAB1-209ENST00000545870 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 ZFYVE16Q7Z3T8 1539 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 FKBP8Q14318 412 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 ABCA9Q8IUA7 1624 aa11.42□□□□□ -0.58
PRKAB1-209ENST00000545870 SPAG9O60271 1321 aaKnown RBP11.41□□□□□ -0.58
PRKAB1-209ENST00000545870 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
PRKAB1-209ENST00000545870 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
PRKAB1-209ENST00000545870 A2MP01023 1474 aa11.4□□□□□ -0.58
PRKAB1-209ENST00000545870 DEPDC5O75140 1603 aa11.4□□□□□ -0.58
PRKAB1-209ENST00000545870 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
PRKAB1-209ENST00000545870 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
PRKAB1-209ENST00000545870 TRPM2O94759 1503 aa11.39□□□□□ -0.59
PRKAB1-209ENST00000545870 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
PRKAB1-209ENST00000545870 PTPRTO14522 1441 aa11.38□□□□□ -0.59
PRKAB1-209ENST00000545870 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 E9PCH4 1651 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 RALBP1Q15311 655 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 KANK1Q14678 1352 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 FANCAO15360 1455 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
PRKAB1-209ENST00000545870 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
PRKAB1-209ENST00000545870 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
PRKAB1-209ENST00000545870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRKAB1-209ENST00000545870 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
PRKAB1-209ENST00000545870 TET3O43151 1660 aa11.36□□□□□ -0.59
PRKAB1-209ENST00000545870 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
PRKAB1-209ENST00000545870 BRD4O60885 1362 aaPredicted RBP11.35□□□□□ -0.59
PRKAB1-209ENST00000545870 COL17A1Q9UMD9 1497 aaPredicted RBP11.35□□□□□ -0.59
PRKAB1-209ENST00000545870 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
PRKAB1-209ENST00000545870 CFAP74Q9C0B2 1584 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 ADGRL1O94910 1474 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 INSRP06213 1382 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 ASXL2Q76L83 1435 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 SMG6Q86US8 1419 aaKnown RBP11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 SCAPERQ9BY12 1400 aa11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
PRKAB1-209ENST00000545870 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
PRKAB1-209ENST00000545870 LMTK2Q8IWU2 1503 aa11.31□□□□□ -0.6
PRKAB1-209ENST00000545870 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
PRKAB1-209ENST00000545870 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
PRKAB1-209ENST00000545870 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
PRKAB1-209ENST00000545870 LRPPRCP42704 1394 aaKnown RBP11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 CEP152O94986 1710 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 MYT1Q01538 1121 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 PNISRQ8TF01 805 aaKnown RBP11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 ZNF518AQ6AHZ1 1483 aa11.3□□□□□ -0.6
PRKAB1-209ENST00000545870 TMF1P82094 1093 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 TESK2Q96S53 571 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
PRKAB1-209ENST00000545870 MYOM2P54296 1465 aa11.28□□□□□ -0.6
PRKAB1-209ENST00000545870 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKAB1-209ENST00000545870 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
PRKAB1-209ENST00000545870 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
PRKAB1-209ENST00000545870 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.6
PRKAB1-209ENST00000545870 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
PRKAB1-209ENST00000545870 EFCAB6Q5THR3 1501 aa11.27□□□□□ -0.61
PRKAB1-209ENST00000545870 NBPF1Q3BBV0 1214 aa11.27□□□□□ -0.61
PRKAB1-209ENST00000545870 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
PRKAB1-209ENST00000545870 BCANQ96GW7 911 aa11.27□□□□□ -0.61
PRKAB1-209ENST00000545870 PPP4R2Q9NY27 417 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms