RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 PTPRTO14522 1441 aa15.63■□□□□ 0.09
GABRB3-205ENST00000545868 NCOA1Q15788 1441 aa15.63■□□□□ 0.09
GABRB3-205ENST00000545868 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
GABRB3-205ENST00000545868 A2MP01023 1474 aa15.63■□□□□ 0.09
GABRB3-205ENST00000545868 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
GABRB3-205ENST00000545868 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
GABRB3-205ENST00000545868 MBD5Q9P267 1494 aa15.62■□□□□ 0.09
GABRB3-205ENST00000545868 NPATQ14207 1427 aa15.61■□□□□ 0.09
GABRB3-205ENST00000545868 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
GABRB3-205ENST00000545868 CFDP1Q9UEE9 299 aaPredicted RBP15.6■□□□□ 0.09
GABRB3-205ENST00000545868 CEP170BQ9Y4F5 1589 aaPredicted RBP15.6■□□□□ 0.09
GABRB3-205ENST00000545868 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
GABRB3-205ENST00000545868 ZMYM3Q14202 1370 aa15.6■□□□□ 0.09
GABRB3-205ENST00000545868 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
GABRB3-205ENST00000545868 POLR1AO95602 1720 aaPredicted RBP15.58■□□□□ 0.08
GABRB3-205ENST00000545868 ESF1Q9H501 851 aaKnown RBP15.58■□□□□ 0.08
GABRB3-205ENST00000545868 PTPRKQ15262 1439 aa15.58■□□□□ 0.08
GABRB3-205ENST00000545868 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
GABRB3-205ENST00000545868 NCOA2Q15596 1464 aa15.55■□□□□ 0.08
GABRB3-205ENST00000545868 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
GABRB3-205ENST00000545868 RTEL1-TNFRSF6BF6WH68 1400 aa15.53■□□□□ 0.08
GABRB3-205ENST00000545868 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
GABRB3-205ENST00000545868 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
GABRB3-205ENST00000545868 PLA2R1Q13018 1463 aa15.52■□□□□ 0.08
GABRB3-205ENST00000545868 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
GABRB3-205ENST00000545868 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.08
GABRB3-205ENST00000545868 GGT6Q6P531 493 aa15.51■□□□□ 0.07
GABRB3-205ENST00000545868 IQSEC2Q5JU85 1478 aa15.51■□□□□ 0.07
GABRB3-205ENST00000545868 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
GABRB3-205ENST00000545868 NCKAP5LQ9HCH0 1330 aa15.49■□□□□ 0.07
GABRB3-205ENST00000545868 KDM5DQ9BY66 1539 aa15.49■□□□□ 0.07
GABRB3-205ENST00000545868 CAPN15O75808 1086 aa15.49■□□□□ 0.07
GABRB3-205ENST00000545868 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
GABRB3-205ENST00000545868 A2ML1A8K2U0 1454 aa15.48■□□□□ 0.07
GABRB3-205ENST00000545868 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
GABRB3-205ENST00000545868 CEP152O94986 1710 aa15.48■□□□□ 0.07
GABRB3-205ENST00000545868 FAM135AQ9P2D6 1515 aa15.48■□□□□ 0.07
GABRB3-205ENST00000545868 SPATA31D1Q6ZQQ2 1576 aa15.46■□□□□ 0.07
GABRB3-205ENST00000545868 MAST1Q9Y2H9 1570 aa15.46■□□□□ 0.07
GABRB3-205ENST00000545868 PZPP20742 1482 aa15.46■□□□□ 0.06
GABRB3-205ENST00000545868 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
GABRB3-205ENST00000545868 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
GABRB3-205ENST00000545868 MROH1Q8NDA8 1641 aa15.45■□□□□ 0.06
GABRB3-205ENST00000545868 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
GABRB3-205ENST00000545868 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
GABRB3-205ENST00000545868 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
GABRB3-205ENST00000545868 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
GABRB3-205ENST00000545868 STRCP1A6NGW2 1772 aa15.42■□□□□ 0.06
GABRB3-205ENST00000545868 KIF3BO15066 747 aa15.41■□□□□ 0.06
GABRB3-205ENST00000545868 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-205ENST00000545868 POLA2Q14181 598 aa15.41■□□□□ 0.06
GABRB3-205ENST00000545868 TNRQ92752 1358 aa15.4■□□□□ 0.06
GABRB3-205ENST00000545868 PKD2Q13563 968 aa15.4■□□□□ 0.06
GABRB3-205ENST00000545868 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
GABRB3-205ENST00000545868 ILDR2Q71H61 639 aa15.4■□□□□ 0.06
GABRB3-205ENST00000545868 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
GABRB3-205ENST00000545868 ABCC3O15438 1527 aa15.39■□□□□ 0.05
GABRB3-205ENST00000545868 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
GABRB3-205ENST00000545868 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
GABRB3-205ENST00000545868 DISP3Q9P2K9 1392 aa15.38■□□□□ 0.05
GABRB3-205ENST00000545868 VWDEQ8N2E2 1590 aa15.38■□□□□ 0.05
GABRB3-205ENST00000545868 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
GABRB3-205ENST00000545868 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
GABRB3-205ENST00000545868 UGGT1Q9NYU2 1555 aa15.36■□□□□ 0.05
GABRB3-205ENST00000545868 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
GABRB3-205ENST00000545868 NLRP1Q9C000 1473 aa15.35■□□□□ 0.05
GABRB3-205ENST00000545868 RSPH4AQ5TD94 716 aa15.35■□□□□ 0.05
GABRB3-205ENST00000545868 ALKQ9UM73 1620 aa15.35■□□□□ 0.05
GABRB3-205ENST00000545868 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
GABRB3-205ENST00000545868 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
GABRB3-205ENST00000545868 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
GABRB3-205ENST00000545868 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
GABRB3-205ENST00000545868 XIRP1Q702N8 1843 aaKnown RBP15.33■□□□□ 0.05
GABRB3-205ENST00000545868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
GABRB3-205ENST00000545868 MED14O60244 1454 aa15.33■□□□□ 0.04
GABRB3-205ENST00000545868 CPS1P31327 1500 aa15.33■□□□□ 0.04
GABRB3-205ENST00000545868 ERVK-7P63135 1459 aa15.32■□□□□ 0.04
GABRB3-205ENST00000545868 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
GABRB3-205ENST00000545868 PRDM15P57071 1507 aaPredicted RBP15.32■□□□□ 0.04
GABRB3-205ENST00000545868 DUOX2Q9NRD8 1548 aa15.31■□□□□ 0.04
GABRB3-205ENST00000545868 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
GABRB3-205ENST00000545868 TSPY4P0CV99 314 aa15.29■□□□□ 0.04
GABRB3-205ENST00000545868 TSPY10P0CW01 314 aa15.29■□□□□ 0.04
GABRB3-205ENST00000545868 NPHP4O75161 1426 aaPredicted RBP15.28■□□□□ 0.04
GABRB3-205ENST00000545868 ABCB7O75027 752 aa15.27■□□□□ 0.04
GABRB3-205ENST00000545868 PIK3C2BO00750 1634 aa15.27■□□□□ 0.03
GABRB3-205ENST00000545868 SYNMO15061 1565 aa15.27■□□□□ 0.03
GABRB3-205ENST00000545868 ABCC5O15440 1437 aa15.26■□□□□ 0.03
GABRB3-205ENST00000545868 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
GABRB3-205ENST00000545868 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
GABRB3-205ENST00000545868 ANKLE2Q86XL3 938 aa15.24■□□□□ 0.03
GABRB3-205ENST00000545868 KDM5AP29375 1690 aaKnown RBP15.23■□□□□ 0.03
GABRB3-205ENST00000545868 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
GABRB3-205ENST00000545868 SOCS7O14512 581 aa15.23■□□□□ 0.03
GABRB3-205ENST00000545868 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
GABRB3-205ENST00000545868 DAPK1P53355 1430 aa15.23■□□□□ 0.03
GABRB3-205ENST00000545868 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
GABRB3-205ENST00000545868 KIF15Q9NS87 1388 aa15.23■□□□□ 0.03
GABRB3-205ENST00000545868 SLIT1O75093 1534 aa15.22■□□□□ 0.03
GABRB3-205ENST00000545868 ARHGAP23Q9P227 1491 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms