RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
NECAP1-208ENST00000545807 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
NECAP1-208ENST00000545807 SYCP2Q9BX26 1530 aa9□□□□□ -0.97
NECAP1-208ENST00000545807 RGL3Q3MIN7 710 aa9□□□□□ -0.97
NECAP1-208ENST00000545807 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
NECAP1-208ENST00000545807 ADCY10Q96PN6 1610 aa9□□□□□ -0.97
NECAP1-208ENST00000545807 DNMT1P26358 1616 aaKnown RBP8.99□□□□□ -0.97
NECAP1-208ENST00000545807 ITSN2Q9NZM3 1697 aa8.99□□□□□ -0.97
NECAP1-208ENST00000545807 PLPPR3Q6T4P5 718 aa8.99□□□□□ -0.97
NECAP1-208ENST00000545807 SPAG9O60271 1321 aaKnown RBP8.99□□□□□ -0.97
NECAP1-208ENST00000545807 KDM5BQ9UGL1 1544 aa8.98□□□□□ -0.97
NECAP1-208ENST00000545807 DDX10Q13206 875 aaKnown RBP8.98□□□□□ -0.97
NECAP1-208ENST00000545807 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
NECAP1-208ENST00000545807 PRDM4Q9UKN5 801 aa8.98□□□□□ -0.97
NECAP1-208ENST00000545807 TRAPPC8Q9Y2L5 1435 aa8.98□□□□□ -0.97
NECAP1-208ENST00000545807 RAPGEF3O95398 923 aa8.98□□□□□ -0.97
NECAP1-208ENST00000545807 HSP90AA2PQ14568 343 aaPredicted RBP8.97□□□□□ -0.97
NECAP1-208ENST00000545807 CDC42BPBQ9Y5S2 1711 aa8.97□□□□□ -0.97
NECAP1-208ENST00000545807 SAMD9LQ8IVG5 1584 aa8.97□□□□□ -0.97
NECAP1-208ENST00000545807 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
NECAP1-208ENST00000545807 WDR7Q9Y4E6 1490 aa8.97□□□□□ -0.97
NECAP1-208ENST00000545807 MBD5Q9P267 1494 aa8.96□□□□□ -0.97
NECAP1-208ENST00000545807 ARHGEF12Q9NZN5 1544 aa8.96□□□□□ -0.97
NECAP1-208ENST00000545807 FAM69CQ0P6D2 419 aa8.96□□□□□ -0.98
NECAP1-208ENST00000545807 PLCH2O75038 1416 aa8.96□□□□□ -0.98
NECAP1-208ENST00000545807 KIF3BO15066 747 aa8.96□□□□□ -0.98
NECAP1-208ENST00000545807 CCDC141Q6ZP82 1450 aa8.95□□□□□ -0.98
NECAP1-208ENST00000545807 BRD2P25440 801 aaKnown RBP8.95□□□□□ -0.98
NECAP1-208ENST00000545807 NAP1L2Q9ULW6 460 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-208ENST00000545807 SCAPERQ9BY12 1400 aa8.95□□□□□ -0.98
NECAP1-208ENST00000545807 DENND4BO75064 1496 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-208ENST00000545807 UHRF1BP1LA0JNW5 1464 aa8.95□□□□□ -0.98
NECAP1-208ENST00000545807 CALD1Q05682 793 aaKnown RBP8.95□□□□□ -0.98
NECAP1-208ENST00000545807 CENPJQ9HC77 1338 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-208ENST00000545807 IPO9Q96P70 1041 aaKnown RBP8.94□□□□□ -0.98
NECAP1-208ENST00000545807 GGT6Q6P531 493 aa8.94□□□□□ -0.98
NECAP1-208ENST00000545807 FANCAO15360 1455 aa8.94□□□□□ -0.98
NECAP1-208ENST00000545807 PLEKHH2Q8IVE3 1493 aa8.94□□□□□ -0.98
NECAP1-208ENST00000545807 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-208ENST00000545807 NBPF8Q3BBV2 869 aa8.93□□□□□ -0.98
NECAP1-208ENST00000545807 GCC2Q8IWJ2 1684 aa8.93□□□□□ -0.98
NECAP1-208ENST00000545807 CD109Q6YHK3 1445 aa8.93□□□□□ -0.98
NECAP1-208ENST00000545807 PREX2Q70Z35 1606 aa8.93□□□□□ -0.98
NECAP1-208ENST00000545807 MYO5CQ9NQX4 1742 aa8.92□□□□□ -0.98
NECAP1-208ENST00000545807 NEFMP07197 916 aa8.92□□□□□ -0.98
NECAP1-208ENST00000545807 DCAF11Q8TEB1 546 aa8.92□□□□□ -0.98
NECAP1-208ENST00000545807 ANKRD30BQ9BXX2 1392 aa8.92□□□□□ -0.98
NECAP1-208ENST00000545807 PZPP20742 1482 aa8.91□□□□□ -0.98
NECAP1-208ENST00000545807 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
NECAP1-208ENST00000545807 ADGRL1O94910 1474 aa8.91□□□□□ -0.98
NECAP1-208ENST00000545807 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
NECAP1-208ENST00000545807 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
NECAP1-208ENST00000545807 HOMEZQ8IX15 550 aa8.9□□□□□ -0.98
NECAP1-208ENST00000545807 HSPA5P11021 654 aaKnown RBP8.9□□□□□ -0.98
NECAP1-208ENST00000545807 MLECQ14165 292 aa8.89□□□□□ -0.99
NECAP1-208ENST00000545807 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
NECAP1-208ENST00000545807 CHMP4AQ9BY43 222 aa8.89□□□□□ -0.99
NECAP1-208ENST00000545807 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
NECAP1-208ENST00000545807 GSE1Q14687 1217 aa8.88□□□□□ -0.99
NECAP1-208ENST00000545807 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-208ENST00000545807 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
NECAP1-208ENST00000545807 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-208ENST00000545807 ADGBQ8N7X0 1667 aa8.87□□□□□ -0.99
NECAP1-208ENST00000545807 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
NECAP1-208ENST00000545807 CROCC2H7BZ55 1655 aa8.87□□□□□ -0.99
NECAP1-208ENST00000545807 RIMBP3CA6NJZ7 1639 aa8.87□□□□□ -0.99
NECAP1-208ENST00000545807 RIMBP3BA6NNM3 1639 aa8.87□□□□□ -0.99
NECAP1-208ENST00000545807 RIMBP3Q9UFD9 1639 aa8.87□□□□□ -0.99
NECAP1-208ENST00000545807 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
NECAP1-208ENST00000545807 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
NECAP1-208ENST00000545807 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
NECAP1-208ENST00000545807 ARHGEF5Q12774 1597 aa8.85□□□□□ -0.99
NECAP1-208ENST00000545807 ANP32AP39687 249 aaKnown RBP8.85□□□□□ -0.99
NECAP1-208ENST00000545807 DHX37Q8IY37 1157 aaKnown RBP8.85□□□□□ -0.99
NECAP1-208ENST00000545807 STAC3Q96MF2 364 aa8.85□□□□□ -0.99
NECAP1-208ENST00000545807 CHMP4BQ9H444 224 aaKnown RBP8.85□□□□□ -0.99
NECAP1-208ENST00000545807 CFAP65Q6ZU64 1925 aaKnown RBP8.85□□□□□ -0.99
NECAP1-208ENST00000545807 ABCC1P33527 1531 aa8.85□□□□□ -0.99
NECAP1-208ENST00000545807 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-208ENST00000545807 TSPOAP1O95153 1857 aa8.85□□□□□ -0.99
NECAP1-208ENST00000545807 RPRD2Q5VT52 1461 aaKnown RBP8.83□□□□□ -1
NECAP1-208ENST00000545807 SAMD1Q6SPF0 538 aaPredicted RBP8.83□□□□□ -1
NECAP1-208ENST00000545807 CARD11Q9BXL7 1154 aa8.83□□□□□ -1
NECAP1-208ENST00000545807 PPP4R2Q9NY27 417 aa8.83□□□□□ -1
NECAP1-208ENST00000545807 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
NECAP1-208ENST00000545807 FAM135AQ9P2D6 1515 aa8.83□□□□□ -1
NECAP1-208ENST00000545807 CCDC144AA2RUR9 1427 aa8.83□□□□□ -1
NECAP1-208ENST00000545807 CHRM1P11229 460 aaPredicted RBP8.83□□□□□ -1
NECAP1-208ENST00000545807 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
NECAP1-208ENST00000545807 RGS3P49796 1198 aa8.82□□□□□ -1
NECAP1-208ENST00000545807 ABCA9Q8IUA7 1624 aa8.82□□□□□ -1
NECAP1-208ENST00000545807 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
NECAP1-208ENST00000545807 RRAGDQ9NQL2 400 aaPredicted RBP8.8□□□□□ -1
NECAP1-208ENST00000545807 ATP7AQ04656 1500 aa8.8□□□□□ -1
NECAP1-208ENST00000545807 DUOX2Q9NRD8 1548 aa8.8□□□□□ -1
NECAP1-208ENST00000545807 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
NECAP1-208ENST00000545807 KANK1Q14678 1352 aa8.8□□□□□ -1
NECAP1-208ENST00000545807 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
NECAP1-208ENST00000545807 PDCL3Q9H2J4 239 aa8.79□□□□□ -1
NECAP1-208ENST00000545807 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms