RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
SCARB1-209ENST00000545305 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
SCARB1-209ENST00000545305 COL17A1Q9UMD9 1497 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-209ENST00000545305 DEPDC5O75140 1603 aa20.16■□□□□ 0.82
SCARB1-209ENST00000545305 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
SCARB1-209ENST00000545305 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
SCARB1-209ENST00000545305 FAM135AQ9P2D6 1515 aa20.14■□□□□ 0.81
SCARB1-209ENST00000545305 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
SCARB1-209ENST00000545305 KANK1Q14678 1352 aa20.13■□□□□ 0.81
SCARB1-209ENST00000545305 KIF3BO15066 747 aa20.13■□□□□ 0.81
SCARB1-209ENST00000545305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.81
SCARB1-209ENST00000545305 RNF17Q9BXT8 1623 aaKnown RBP20.13■□□□□ 0.81
SCARB1-209ENST00000545305 ATP10AO60312 1499 aa20.12■□□□□ 0.81
SCARB1-209ENST00000545305 REREQ9P2R6 1566 aa20.11■□□□□ 0.81
SCARB1-209ENST00000545305 PRDM15P57071 1507 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-209ENST00000545305 MROH1Q8NDA8 1641 aa20.08■□□□□ 0.8
SCARB1-209ENST00000545305 PKD2Q13563 968 aa20.07■□□□□ 0.8
SCARB1-209ENST00000545305 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
SCARB1-209ENST00000545305 TET3O43151 1660 aa20.04■□□□□ 0.8
SCARB1-209ENST00000545305 AGLP35573 1532 aa20.04■□□□□ 0.8
SCARB1-209ENST00000545305 FOXD1Q16676 465 aa20.03■□□□□ 0.8
SCARB1-209ENST00000545305 ANKRD30BQ9BXX2 1392 aa20.02■□□□□ 0.8
SCARB1-209ENST00000545305 NEUROD1Q13562 356 aa20■□□□□ 0.79
SCARB1-209ENST00000545305 GGT6Q6P531 493 aa20■□□□□ 0.79
SCARB1-209ENST00000545305 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
SCARB1-209ENST00000545305 LMTK2Q8IWU2 1503 aa20■□□□□ 0.79
SCARB1-209ENST00000545305 CEP152O94986 1710 aa19.99■□□□□ 0.79
SCARB1-209ENST00000545305 ZC3H13Q5T200 1668 aaKnown RBP19.99■□□□□ 0.79
SCARB1-209ENST00000545305 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
SCARB1-209ENST00000545305 E9PCH4 1651 aa19.97■□□□□ 0.79
SCARB1-209ENST00000545305 ABCC3O15438 1527 aa19.97■□□□□ 0.79
SCARB1-209ENST00000545305 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
SCARB1-209ENST00000545305 TONSLQ96HA7 1378 aa19.95■□□□□ 0.79
SCARB1-209ENST00000545305 RPRD2Q5VT52 1461 aaKnown RBP19.94■□□□□ 0.78
SCARB1-209ENST00000545305 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
SCARB1-209ENST00000545305 SIGLEC1Q9BZZ2 1709 aa19.93■□□□□ 0.78
SCARB1-209ENST00000545305 CAMSAP1Q5T5Y3 1602 aa19.93■□□□□ 0.78
SCARB1-209ENST00000545305 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
SCARB1-209ENST00000545305 PPP6R1Q9UPN7 881 aa19.91■□□□□ 0.78
SCARB1-209ENST00000545305 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-209ENST00000545305 CCDC144AA2RUR9 1427 aa19.9■□□□□ 0.78
SCARB1-209ENST00000545305 TRPM2O94759 1503 aa19.89■□□□□ 0.77
SCARB1-209ENST00000545305 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
SCARB1-209ENST00000545305 PTPRTO14522 1441 aa19.86■□□□□ 0.77
SCARB1-209ENST00000545305 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
SCARB1-209ENST00000545305 MLECQ14165 292 aa19.85■□□□□ 0.77
SCARB1-209ENST00000545305 NPATQ14207 1427 aa19.85■□□□□ 0.77
SCARB1-209ENST00000545305 CLTCQ00610 1675 aaKnown RBP19.84■□□□□ 0.77
SCARB1-209ENST00000545305 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
SCARB1-209ENST00000545305 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
SCARB1-209ENST00000545305 CLTCL1P53675 1640 aa19.8■□□□□ 0.76
SCARB1-209ENST00000545305 L3MBTL2Q969R5 705 aa19.77■□□□□ 0.76
SCARB1-209ENST00000545305 PREX1Q8TCU6 1659 aa19.77■□□□□ 0.76
SCARB1-209ENST00000545305 NOS1P29475 1434 aa19.76■□□□□ 0.75
SCARB1-209ENST00000545305 MROH2AA6NES4 1674 aa19.76■□□□□ 0.75
SCARB1-209ENST00000545305 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
SCARB1-209ENST00000545305 CFAP65Q6ZU64 1925 aaKnown RBP19.75■□□□□ 0.75
SCARB1-209ENST00000545305 KIF1BO60333 1816 aa19.74■□□□□ 0.75
SCARB1-209ENST00000545305 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
SCARB1-209ENST00000545305 FER1L4A9Z1Z3 1794 aa19.73■□□□□ 0.75
SCARB1-209ENST00000545305 SYNMO15061 1565 aa19.73■□□□□ 0.75
SCARB1-209ENST00000545305 NEURL4Q96JN8 1562 aa19.73■□□□□ 0.75
SCARB1-209ENST00000545305 UGGT1Q9NYU2 1555 aa19.73■□□□□ 0.75
SCARB1-209ENST00000545305 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
SCARB1-209ENST00000545305 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
SCARB1-209ENST00000545305 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
SCARB1-209ENST00000545305 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
SCARB1-209ENST00000545305 RGL3Q3MIN7 710 aa19.68■□□□□ 0.74
SCARB1-209ENST00000545305 ADGRB3O60242 1522 aa19.67■□□□□ 0.74
SCARB1-209ENST00000545305 SLC52A1Q9NWF4 448 aa19.67■□□□□ 0.74
SCARB1-209ENST00000545305 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
SCARB1-209ENST00000545305 FBXO31Q5XUX0 539 aaPredicted RBP19.65■□□□□ 0.74
SCARB1-209ENST00000545305 CHGAP10645 457 aaKnown RBP19.64■□□□□ 0.73
SCARB1-209ENST00000545305 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
SCARB1-209ENST00000545305 MADDQ8WXG6 1647 aa19.64■□□□□ 0.73
SCARB1-209ENST00000545305 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
SCARB1-209ENST00000545305 C3P01024 1663 aa19.62■□□□□ 0.73
SCARB1-209ENST00000545305 ZNF326Q5BKZ1 582 aaKnown RBP19.62■□□□□ 0.73
SCARB1-209ENST00000545305 STAC3Q96MF2 364 aa19.62■□□□□ 0.73
SCARB1-209ENST00000545305 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
SCARB1-209ENST00000545305 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
SCARB1-209ENST00000545305 TNRQ92752 1358 aa19.61■□□□□ 0.73
SCARB1-209ENST00000545305 IDI1Q13907 227 aa19.6■□□□□ 0.73
SCARB1-209ENST00000545305 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
SCARB1-209ENST00000545305 IFT172Q9UG01 1749 aa19.59■□□□□ 0.73
SCARB1-209ENST00000545305 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
SCARB1-209ENST00000545305 MYOM2P54296 1465 aa19.58■□□□□ 0.72
SCARB1-209ENST00000545305 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.72
SCARB1-209ENST00000545305 RPGRIP1LQ68CZ1 1315 aa19.57■□□□□ 0.72
SCARB1-209ENST00000545305 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
SCARB1-209ENST00000545305 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
SCARB1-209ENST00000545305 PPLO60437 1756 aa19.55■□□□□ 0.72
SCARB1-209ENST00000545305 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
SCARB1-209ENST00000545305 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
SCARB1-209ENST00000545305 TRPM1Q7Z4N2 1603 aa19.54■□□□□ 0.72
SCARB1-209ENST00000545305 MYO5BQ9ULV0 1848 aa19.53■□□□□ 0.72
SCARB1-209ENST00000545305 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-209ENST00000545305 KDM5AP29375 1690 aaKnown RBP19.52■□□□□ 0.71
SCARB1-209ENST00000545305 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
SCARB1-209ENST00000545305 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms