RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 SUPT6HQ7KZ85 1726 aaKnown RBP12.02□□□□□ -0.49
COPA-207ENST00000545284 DHX29Q7Z478 1369 aaKnown RBP12.02□□□□□ -0.49
COPA-207ENST00000545284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPA-207ENST00000545284 MIA2Q96PC5 1412 aa12.02□□□□□ -0.49
COPA-207ENST00000545284 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
COPA-207ENST00000545284 ALKQ9UM73 1620 aa12.01□□□□□ -0.49
COPA-207ENST00000545284 PZPP20742 1482 aa12.01□□□□□ -0.49
COPA-207ENST00000545284 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
COPA-207ENST00000545284 LRRC7Q96NW7 1537 aa12□□□□□ -0.49
COPA-207ENST00000545284 INO80Q9ULG1 1556 aaPredicted RBP12□□□□□ -0.49
COPA-207ENST00000545284 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
COPA-207ENST00000545284 DEPDC5O75140 1603 aa11.99□□□□□ -0.49
COPA-207ENST00000545284 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
COPA-207ENST00000545284 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
COPA-207ENST00000545284 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
COPA-207ENST00000545284 UGGT1Q9NYU2 1555 aa11.97□□□□□ -0.49
COPA-207ENST00000545284 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
COPA-207ENST00000545284 CDC42BPAQ5VT25 1732 aa11.97□□□□□ -0.49
COPA-207ENST00000545284 KIF3BO15066 747 aa11.96□□□□□ -0.49
COPA-207ENST00000545284 POTEAQ6S8J7 498 aa11.96□□□□□ -0.49
COPA-207ENST00000545284 RNF17Q9BXT8 1623 aaKnown RBP11.95□□□□□ -0.5
COPA-207ENST00000545284 ADGBQ8N7X0 1667 aa11.94□□□□□ -0.5
COPA-207ENST00000545284 SYNMO15061 1565 aa11.94□□□□□ -0.5
COPA-207ENST00000545284 KDM5DQ9BY66 1539 aa11.94□□□□□ -0.5
COPA-207ENST00000545284 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
COPA-207ENST00000545284 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
COPA-207ENST00000545284 LRRIQ1Q96JM4 1722 aa11.91□□□□□ -0.5
COPA-207ENST00000545284 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
COPA-207ENST00000545284 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
COPA-207ENST00000545284 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
COPA-207ENST00000545284 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
COPA-207ENST00000545284 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
COPA-207ENST00000545284 EID1Q9Y6B2 187 aa11.87□□□□□ -0.51
COPA-207ENST00000545284 SCAF11Q99590 1463 aaKnown RBP11.87□□□□□ -0.51
COPA-207ENST00000545284 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
COPA-207ENST00000545284 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
COPA-207ENST00000545284 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
COPA-207ENST00000545284 UPF1Q92900 1129 aaKnown RBP eCLIP11.86□□□□□ -0.51
COPA-207ENST00000545284 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
COPA-207ENST00000545284 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
COPA-207ENST00000545284 JCADQ9P266 1359 aa11.84□□□□□ -0.51
COPA-207ENST00000545284 KCNA6P17658 529 aa11.84□□□□□ -0.51
COPA-207ENST00000545284 LTKP29376 864 aa11.84□□□□□ -0.51
COPA-207ENST00000545284 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
COPA-207ENST00000545284 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
COPA-207ENST00000545284 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
COPA-207ENST00000545284 SLIT1O75093 1534 aa11.83□□□□□ -0.52
COPA-207ENST00000545284 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
COPA-207ENST00000545284 TMEM94Q12767 1356 aa11.82□□□□□ -0.52
COPA-207ENST00000545284 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
COPA-207ENST00000545284 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
COPA-207ENST00000545284 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
COPA-207ENST00000545284 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
COPA-207ENST00000545284 NCOA2Q15596 1464 aa11.8□□□□□ -0.52
COPA-207ENST00000545284 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
COPA-207ENST00000545284 PROSER2Q86WR7 435 aaPredicted RBP11.79□□□□□ -0.52
COPA-207ENST00000545284 ABCC3O15438 1527 aa11.79□□□□□ -0.52
COPA-207ENST00000545284 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
COPA-207ENST00000545284 TIAM1Q13009 1591 aa11.78□□□□□ -0.52
COPA-207ENST00000545284 TMEM2Q9UHN6 1383 aa11.78□□□□□ -0.52
COPA-207ENST00000545284 MSH6P52701 1360 aa11.77□□□□□ -0.53
COPA-207ENST00000545284 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
COPA-207ENST00000545284 RXRBP28702 533 aa11.76□□□□□ -0.53
COPA-207ENST00000545284 FOXD1Q16676 465 aa11.76□□□□□ -0.53
COPA-207ENST00000545284 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
COPA-207ENST00000545284 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
COPA-207ENST00000545284 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
COPA-207ENST00000545284 NCOA3Q9Y6Q9 1424 aa11.75□□□□□ -0.53
COPA-207ENST00000545284 NKTRP30414 1462 aaKnown RBP11.75□□□□□ -0.53
COPA-207ENST00000545284 ROBO1Q9Y6N7 1651 aa11.75□□□□□ -0.53
COPA-207ENST00000545284 UBR1Q8IWV7 1749 aa11.74□□□□□ -0.53
COPA-207ENST00000545284 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
COPA-207ENST00000545284 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
COPA-207ENST00000545284 MAP3K1Q13233 1512 aa11.73□□□□□ -0.53
COPA-207ENST00000545284 MEX3CQ5U5Q3 659 aaKnown RBP11.73□□□□□ -0.53
COPA-207ENST00000545284 XIRP1Q702N8 1843 aaKnown RBP11.72□□□□□ -0.53
COPA-207ENST00000545284 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.53
COPA-207ENST00000545284 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
COPA-207ENST00000545284 TRIM52Q96A61 297 aa11.71□□□□□ -0.53
COPA-207ENST00000545284 SLC26A8Q96RN1 970 aa11.71□□□□□ -0.53
COPA-207ENST00000545284 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
COPA-207ENST00000545284 CADPS2Q86UW7 1296 aa11.7□□□□□ -0.54
COPA-207ENST00000545284 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
COPA-207ENST00000545284 TET3O43151 1660 aa11.7□□□□□ -0.54
COPA-207ENST00000545284 IDI1Q13907 227 aa11.69□□□□□ -0.54
COPA-207ENST00000545284 MAST1Q9Y2H9 1570 aa11.69□□□□□ -0.54
COPA-207ENST00000545284 KDM5AP29375 1690 aaKnown RBP11.68□□□□□ -0.54
COPA-207ENST00000545284 SETD1AO15047 1707 aaKnown RBP11.68□□□□□ -0.54
COPA-207ENST00000545284 EFCAB6Q5THR3 1501 aa11.67□□□□□ -0.54
COPA-207ENST00000545284 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
COPA-207ENST00000545284 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
COPA-207ENST00000545284 LRP6O75581 1613 aa11.67□□□□□ -0.54
COPA-207ENST00000545284 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
COPA-207ENST00000545284 DUOX2Q9NRD8 1548 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 TBX22Q9Y458 520 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 KANK1Q14678 1352 aa11.66□□□□□ -0.54
COPA-207ENST00000545284 COL16A1Q07092 1604 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms