RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
SPPL3-209ENST00000545209 COLQQ9Y215 455 aaPredicted RBP10.44□□□□□ -0.74
SPPL3-209ENST00000545209 NUP153P49790 1475 aaKnown RBP10.43□□□□□ -0.74
SPPL3-209ENST00000545209 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
SPPL3-209ENST00000545209 ITGAEP38570 1179 aa10.43□□□□□ -0.74
SPPL3-209ENST00000545209 STK24Q9Y6E0 443 aa10.43□□□□□ -0.74
SPPL3-209ENST00000545209 PRG4Q92954 1404 aaPredicted RBP10.42□□□□□ -0.74
SPPL3-209ENST00000545209 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
SPPL3-209ENST00000545209 LHX8Q68G74 356 aa10.42□□□□□ -0.74
SPPL3-209ENST00000545209 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
SPPL3-209ENST00000545209 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
SPPL3-209ENST00000545209 MAGI3Q5TCQ9 1506 aa10.42□□□□□ -0.74
SPPL3-209ENST00000545209 PLCG2P16885 1265 aa10.41□□□□□ -0.74
SPPL3-209ENST00000545209 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
SPPL3-209ENST00000545209 CLSPNQ9HAW4 1339 aa10.4□□□□□ -0.74
SPPL3-209ENST00000545209 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
SPPL3-209ENST00000545209 PLB1Q6P1J6 1458 aa10.4□□□□□ -0.74
SPPL3-209ENST00000545209 PTPRGP23470 1445 aa10.4□□□□□ -0.75
SPPL3-209ENST00000545209 SHROOM2Q13796 1616 aa10.4□□□□□ -0.75
SPPL3-209ENST00000545209 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
SPPL3-209ENST00000545209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.39□□□□□ -0.75
SPPL3-209ENST00000545209 ABCA8O94911 1581 aa10.39□□□□□ -0.75
SPPL3-209ENST00000545209 TROQ12816 1431 aaPredicted RBP10.38□□□□□ -0.75
SPPL3-209ENST00000545209 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
SPPL3-209ENST00000545209 SETD5Q9C0A6 1442 aa10.38□□□□□ -0.75
SPPL3-209ENST00000545209 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
SPPL3-209ENST00000545209 SOX12O15370 315 aa10.37□□□□□ -0.75
SPPL3-209ENST00000545209 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
SPPL3-209ENST00000545209 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
SPPL3-209ENST00000545209 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
SPPL3-209ENST00000545209 ILDR1Q86SU0 546 aaPredicted RBP10.36□□□□□ -0.75
SPPL3-209ENST00000545209 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
SPPL3-209ENST00000545209 RAB3GAP2Q9H2M9 1393 aa10.36□□□□□ -0.75
SPPL3-209ENST00000545209 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
SPPL3-209ENST00000545209 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
SPPL3-209ENST00000545209 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
SPPL3-209ENST00000545209 ADCY10Q96PN6 1610 aa10.33□□□□□ -0.76
SPPL3-209ENST00000545209 UACAQ9BZF9 1416 aa10.33□□□□□ -0.76
SPPL3-209ENST00000545209 ATP10BO94823 1461 aa10.32□□□□□ -0.76
SPPL3-209ENST00000545209 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
SPPL3-209ENST00000545209 HFM1A2PYH4 1435 aa10.32□□□□□ -0.76
SPPL3-209ENST00000545209 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
SPPL3-209ENST00000545209 KIF14Q15058 1648 aa10.31□□□□□ -0.76
SPPL3-209ENST00000545209 PHF8Q9UPP1 1060 aa10.3□□□□□ -0.76
SPPL3-209ENST00000545209 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
SPPL3-209ENST00000545209 ABCC2Q92887 1545 aa10.29□□□□□ -0.76
SPPL3-209ENST00000545209 NLRP6P59044 892 aa10.29□□□□□ -0.76
SPPL3-209ENST00000545209 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
SPPL3-209ENST00000545209 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
SPPL3-209ENST00000545209 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
SPPL3-209ENST00000545209 CFDP1Q9UEE9 299 aaPredicted RBP10.28□□□□□ -0.76
SPPL3-209ENST00000545209 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.76
SPPL3-209ENST00000545209 PTPRKQ15262 1439 aa10.27□□□□□ -0.77
SPPL3-209ENST00000545209 L3MBTL3Q96JM7 780 aaPredicted RBP10.27□□□□□ -0.77
SPPL3-209ENST00000545209 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
SPPL3-209ENST00000545209 ACIN1Q9UKV3 1341 aaKnown RBP10.27□□□□□ -0.77
SPPL3-209ENST00000545209 GPATCH8Q9UKJ3 1502 aaKnown RBP10.27□□□□□ -0.77
SPPL3-209ENST00000545209 NAIPQ13075 1403 aa10.26□□□□□ -0.77
SPPL3-209ENST00000545209 UHRF1BP1LA0JNW5 1464 aa10.26□□□□□ -0.77
SPPL3-209ENST00000545209 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
SPPL3-209ENST00000545209 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
SPPL3-209ENST00000545209 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
SPPL3-209ENST00000545209 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
SPPL3-209ENST00000545209 DAPK1P53355 1430 aa10.25□□□□□ -0.77
SPPL3-209ENST00000545209 CAMSAP2Q08AD1 1489 aa10.25□□□□□ -0.77
SPPL3-209ENST00000545209 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
SPPL3-209ENST00000545209 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
SPPL3-209ENST00000545209 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
SPPL3-209ENST00000545209 GCC2Q8IWJ2 1684 aa10.24□□□□□ -0.77
SPPL3-209ENST00000545209 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
SPPL3-209ENST00000545209 ABCC5O15440 1437 aa10.23□□□□□ -0.77
SPPL3-209ENST00000545209 MAPKBP1O60336 1514 aa10.23□□□□□ -0.77
SPPL3-209ENST00000545209 RRP7BPQ9NSQ0 103 aa10.22□□□□□ -0.77
SPPL3-209ENST00000545209 CHIC2Q9UKJ5 165 aa10.22□□□□□ -0.77
SPPL3-209ENST00000545209 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
SPPL3-209ENST00000545209 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
SPPL3-209ENST00000545209 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
SPPL3-209ENST00000545209 CDC42BPAQ5VT25 1732 aa10.21□□□□□ -0.78
SPPL3-209ENST00000545209 G3V3G9 751 aa10.2□□□□□ -0.78
SPPL3-209ENST00000545209 KDM5BQ9UGL1 1544 aa10.2□□□□□ -0.78
SPPL3-209ENST00000545209 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
SPPL3-209ENST00000545209 ADGBQ8N7X0 1667 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 PREX2Q70Z35 1606 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 SHANK2Q9UPX8 1470 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
SPPL3-209ENST00000545209 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 CROCC2H7BZ55 1655 aa10.18□□□□□ -0.78
SPPL3-209ENST00000545209 ADGRL2O95490 1459 aa10.17□□□□□ -0.78
SPPL3-209ENST00000545209 TMEM121BQ9BXQ6 578 aaPredicted RBP10.17□□□□□ -0.78
SPPL3-209ENST00000545209 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
SPPL3-209ENST00000545209 PLEKHH2Q8IVE3 1493 aa10.17□□□□□ -0.78
SPPL3-209ENST00000545209 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
SPPL3-209ENST00000545209 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
SPPL3-209ENST00000545209 TRIM52Q96A61 297 aa10.16□□□□□ -0.78
SPPL3-209ENST00000545209 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
SPPL3-209ENST00000545209 ARHGEF5Q12774 1597 aa10.16□□□□□ -0.78
SPPL3-209ENST00000545209 ARHGAP5Q13017 1502 aa10.16□□□□□ -0.78
SPPL3-209ENST00000545209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.16□□□□□ -0.78
SPPL3-209ENST00000545209 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms