RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
ATXN3-216ENST00000545170 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
ATXN3-216ENST00000545170 SF3A1Q15459 793 aaKnown RBP10.61□□□□□ -0.71
ATXN3-216ENST00000545170 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
ATXN3-216ENST00000545170 GIMAP7Q8NHV1 300 aa10.6□□□□□ -0.71
ATXN3-216ENST00000545170 DHX37Q8IY37 1157 aaKnown RBP10.6□□□□□ -0.71
ATXN3-216ENST00000545170 BBXQ8WY36 941 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-216ENST00000545170 MCTP1Q6DN14 999 aa10.6□□□□□ -0.71
ATXN3-216ENST00000545170 CENPQQ7L2Z9 268 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-216ENST00000545170 RBM25P49756 843 aaKnown RBP10.59□□□□□ -0.71
ATXN3-216ENST00000545170 RASSF8Q8NHQ8 419 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 NEFHP12036 1026 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 PLPPR3Q6T4P5 718 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 DYDC1Q8WWB3 177 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 MTUS2Q5JR59 1369 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 CCDC173Q0VFZ6 552 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
ATXN3-216ENST00000545170 USP8P40818 1118 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 H3BQV1 296 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 IFFO2Q5TF58 517 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-216ENST00000545170 HMGN5P82970 282 aaKnown RBP10.58□□□□□ -0.72
ATXN3-216ENST00000545170 E9PSI1 815 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 CHMP4AQ9BY43 222 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 ZHX1Q9UKY1 873 aaPredicted RBP10.58□□□□□ -0.72
ATXN3-216ENST00000545170 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
ATXN3-216ENST00000545170 ATP6V1DQ9Y5K8 247 aa10.58□□□□□ -0.72
ATXN3-216ENST00000545170 CLIP1P30622 1438 aa10.57□□□□□ -0.72
ATXN3-216ENST00000545170 KIAA0754O94854 1291 aa10.57□□□□□ -0.72
ATXN3-216ENST00000545170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-216ENST00000545170 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-216ENST00000545170 CHMP3Q9Y3E7 222 aa10.57□□□□□ -0.72
ATXN3-216ENST00000545170 TNNT1P13805 278 aa10.56□□□□□ -0.72
ATXN3-216ENST00000545170 CGNQ9P2M7 1197 aaKnown RBP10.56□□□□□ -0.72
ATXN3-216ENST00000545170 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
ATXN3-216ENST00000545170 TSPY4P0CV99 314 aa10.56□□□□□ -0.72
ATXN3-216ENST00000545170 TSPY10P0CW01 314 aa10.56□□□□□ -0.72
ATXN3-216ENST00000545170 KTN1Q86UP2 1357 aaKnown RBP10.55□□□□□ -0.72
ATXN3-216ENST00000545170 NPHP1O15259 732 aa10.55□□□□□ -0.72
ATXN3-216ENST00000545170 CBX1P83916 185 aa10.55□□□□□ -0.72
ATXN3-216ENST00000545170 CEP162Q5TB80 1403 aa10.55□□□□□ -0.72
ATXN3-216ENST00000545170 TRAK2O60296 914 aa10.54□□□□□ -0.72
ATXN3-216ENST00000545170 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-216ENST00000545170 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
ATXN3-216ENST00000545170 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
ATXN3-216ENST00000545170 PCMTD1Q96MG8 357 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-216ENST00000545170 IRX3P78415 501 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-216ENST00000545170 IPO7O95373 1038 aaKnown RBP10.54□□□□□ -0.72
ATXN3-216ENST00000545170 CENPHQ9H3R5 247 aa10.54□□□□□ -0.72
ATXN3-216ENST00000545170 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
ATXN3-216ENST00000545170 SASS6Q6UVJ0 657 aa10.53□□□□□ -0.72
ATXN3-216ENST00000545170 KCNH8Q96L42 1107 aa10.53□□□□□ -0.72
ATXN3-216ENST00000545170 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
ATXN3-216ENST00000545170 ZRSR2Q15696 482 aaKnown RBP10.52□□□□□ -0.72
ATXN3-216ENST00000545170 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
ATXN3-216ENST00000545170 CAGE1Q8TC20 777 aa10.52□□□□□ -0.73
ATXN3-216ENST00000545170 FAM184AQ8NB25 1140 aa10.52□□□□□ -0.73
ATXN3-216ENST00000545170 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
ATXN3-216ENST00000545170 TMF1P82094 1093 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 FRAT2O75474 233 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-216ENST00000545170 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
ATXN3-216ENST00000545170 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
ATXN3-216ENST00000545170 TRERF1Q96PN7 1200 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 PDCL3Q9H2J4 239 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 SMC4Q9NTJ3 1288 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
ATXN3-216ENST00000545170 INCENPQ9NQS7 918 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 PLIN1O60240 522 aa10.51□□□□□ -0.73
ATXN3-216ENST00000545170 PDCL2Q8N4E4 241 aa10.5□□□□□ -0.73
ATXN3-216ENST00000545170 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
ATXN3-216ENST00000545170 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-216ENST00000545170 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-216ENST00000545170 CALCOCO1Q9P1Z2 691 aa10.5□□□□□ -0.73
ATXN3-216ENST00000545170 NAP1L1P55209 391 aaKnown RBP10.49□□□□□ -0.73
ATXN3-216ENST00000545170 IBSPP21815 317 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-216ENST00000545170 TSPY26PQ9H489 355 aa10.49□□□□□ -0.73
ATXN3-216ENST00000545170 CENPJQ9HC77 1338 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-216ENST00000545170 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
ATXN3-216ENST00000545170 GTF2A1P52655 376 aaPredicted RBP10.49□□□□□ -0.73
ATXN3-216ENST00000545170 NUCB2P80303 420 aa10.49□□□□□ -0.73
ATXN3-216ENST00000545170 MORC1Q86VD1 984 aa10.49□□□□□ -0.73
ATXN3-216ENST00000545170 GOLGA6L7A0A1B0GV03 622 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 GRPEL1Q9HAV7 217 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 RALBP1Q15311 655 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 PDILTQ8N807 584 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
ATXN3-216ENST00000545170 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 PDIA4P13667 645 aaKnown RBP10.47□□□□□ -0.73
ATXN3-216ENST00000545170 NEXNQ0ZGT2 675 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 CCDC112Q8NEF3 446 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 ESPNB1AK53 854 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
ATXN3-216ENST00000545170 ZCCHC6Q5VYS8 1495 aaKnown RBP10.46□□□□□ -0.73
ATXN3-216ENST00000545170 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
ATXN3-216ENST00000545170 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms